| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 1248961 = | 101 (1.150) | 6 (0.070) | 5/412 | 6.2 | 5.7% | intergenic (‑138607/‑57508) | unknown/unknown | tRNA‑Gly‑GCC/tRNA‑Met‑CAT |
| ? | 1 | 1249348 = | 100 (1.190) | intergenic (‑138994/‑57121) | unknown/unknown | tRNA‑Gly‑GCC/tRNA‑Met‑CAT | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTGATAGCCCGTTTCGCGCAACAAGTGATAAATCGGCGTTCCAAAACGCGCCCAATAGTTGCCTTTATCGGCGATTTTATCACCGGTGAGGGTGACGACGCGCTCAATCAGCGGTTCATCATCCATCACTGCGCGTTTAATAGCAAAAGCGGTGCCGATGTTTTGCATCAGCACGCCGATACCGGAGGAGCGTTGACCGCTAGGTACCTCCATGCCGGTCAGCACTTGAATTAACTGTTTTGCCGCGCCGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/1249214‑1248961‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggaagAAGAAAAAAATTGTATTCGCTGTTCTGCCTGTTCCGATGCCTGCCCGGTGAAACTCATGCCGCAGCAATTGTATTGGTTTGCACGCAGCGAAGATCACGAAAAATCGGAA > 1/1249348‑1249457 TTGATAGCCCGTTTCGCGCAACAAGTGATAAATCGGCGTTCCAAAACGCGCCCAATAGTTGCCTTTATCGGCGATTTTATCACCGGTGAGGGTGACGACGCGCTCAATCAGCGGTTCATCATCCATCACTGCGCGTTTAATAGCAAAAGCGGTGCCGATGTTTTGCATCAGCACGCCGATACCGGAGGAGCGTTGACCGCTAGGTACCTCCATGCCGGTCAGCACTTGAATTAACTGTTTTGCCGCGCCGG > 1:526846/1‑251TTGATAGCCCGTTTCGCGCAACAAGTGATAAATCGGCGTTCCAAAACGCGCCCAATAGTTGCCTTTATCGGCGATTTTATCACCGGTGAGGGTGACGACGCGCTCAATCAGCGGTTCATCATCCATCACTGCGCGTTTAATAGCAAAAGCGGTGCCGATGTTTTGCATCAGCACGCCGATACCGGAGGAGCGTTGACCGCTAGGTACCTCCATGCCGGTCAGCACTTGAATTAACTGTTTTGCCGCGCCGG > 1:774519/1‑251 GCGTTCCAAAACGCGCCCAATAGTTGCCTTTATCGGCGATTTTATCACCGGTGAGGGTGACGACGCGCTCAATCAGCGGTTCATCATCCATCACTGCGCGTTTAATAGCAAAAGCGGTGCCGATGTTTTGCATCAGCACGCCGATACCGGAGGAGCGTTGACCGCTAGGTACCTCCATGCCGGTCAGCACTTGAATTAACTGTTTTGCCGCGCCGGAAGAAGAAAAAAATTGTATTCGCTGTTCTGC > 1:323613/1‑247 GCGTTCCAAAACGCGCCCAATAGTTGCCTTTATCGGCGATTTTATCACCGGTGAGGGTGACGACGCGCTCAATCAGCGGTTCATCATCCATCACTGCGCGTTTAATAGCAAAAGCGGTGCCGATGTTTTGCATCAGCACGCCGATACCGGAGGAGCGTTGACCGCTAGGTACCTCCATGCCGGTCAGCACTTGAATTAACTGTTTTGCCGCGCCGGAAGAAGAAAAAAATTGTATTCGCTGTTCTGC > 1:896895/1‑247 CACCGGTGAGGGTGACGACGCGCTCAATCAGCGGTTCATCATCCATCACTGCGCGTTTAATAGCAAAAGCGGTGCCGATGTTTTGCATCAGCACGCCGATACCGGAGGAGCGTTGACCGCTAGGTACCTCCATGCCGGTCAGCACTTGAATTAACTGTTTTGCCGCGCCGGAAGAAGAAAAAAATTGTATTCGCTGTTCTGCCTGTTCCGATGCCTGCCCGGTGAAACTCATGCCGCAGCAATTGTATTGG < 1:568697/251‑1 GAGGGTGACGACGCGCTCAATCAGCGGTTCATCATCCATCACTGCGCGTTTAATAGCAAAAGCGGTGCCGATGTTTTGCATCAGCACGCCGATACCGGAGGAGCGTTGACCGCTAGGTACCTCCATGCCGGTCAGCACTTGAATTAACTGTTTTGCCGCGCCGGAAGAAGAAAAAAATTGTATTCGCTGTTC < 1:326056/192‑1 GTTCATCATCCATCACTGCGCGTTTAATAGCAAAAGCGGTGCCGATGTTTTGCATCAGCACGCCGATACCGGAGGAGCGTTGACCGCTAGGTACCTCCATGCCGGTCAGCACTTGAATTAACTGTTTTGCCGCGCCGGAAGAAGAAAAAAATTGTATTCGCTGTTCTGCCTGTTCCGATGCCTGCCCGGTGAAACTCATGCCGCAGCAATTGTATTGGTTTGCACGCAGCGAAGATCACGAAAAATCGGAA > 1:418911/1‑251 GTTTTGCATCAGCACGCCGATACCGGAGGAGCGTTGACCGCTAGGTACCTCCATGCCGGTCAGCACTTGAATTAACTGTTTTGCCGCGCCGGAAGAAGAAAAAAATTGTATTCGCTGTTCTGCCTGTTCCGATGCCTGCCCGGTGAAACTCATGCCGCAGCAATTGTATTGGTTTGCACGC < 1:433918/181‑1 TTGATAGCCCGTTTCGCGCAACAAGTGATAAATCGGCGTTCCAAAACGCGCCCAATAGTTGCCTTTATCGGCGATTTTATCACCGGTGAGGGTGACGACGCGCTCAATCAGCGGTTCATCATCCATCACTGCGCGTTTAATAGCAAAAGCGGTGCCGATGTTTTGCATCAGCACGCCGATACCGGAGGAGCGTTGACCGCTAGGTACCTCCATGCCGGTCAGCACTTGAATTAACTGTTTTGCCGCGCCGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/1249214‑1248961‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggaagAAGAAAAAAATTGTATTCGCTGTTCTGCCTGTTCCGATGCCTGCCCGGTGAAACTCATGCCGCAGCAATTGTATTGGTTTGCACGCAGCGAAGATCACGAAAAATCGGAA > 1/1249348‑1249457 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |