New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 1 = 124629989 (1.020)5 (0.060) 5/422 6.3 5.3% intergenic (‑135945/‑60170) unknown/unknown tRNA‑Gly‑GCC/tRNA‑Met‑CAT
?1 = 1246551 92 (1.070)intergenic (‑136197/‑59918) unknown/unknown tRNA‑Gly‑GCC/tRNA‑Met‑CAT
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AATCACCGCCTTGGCACGCCACCCCGCCAAGGCGCAAAAACAACTTCCCAAAAATATTGAATTGATTAATACATTGGATTATTTTCAGCATTTCAATCAATTTGACGCCATTATTAATTTGGCGGGCGAGCCGATTTTTGCCCGCCGTTGGACGGAAATCCAAAAAGTGCGGTTGGAATCCAGCCGCGTTTCTTTAACGGAAAAACTGGCGCAACTCATTAACCGCAGCGATGATCCGCCGCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  1/1246055‑1246299
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caatATTGCTTGCCTGTGCTTAATTTTACACCCAATCCGCAACGATATAACGGCAGCATTTGCGCCAGCGCGCCACCTTGTGTGCCGAGCACAATGCCCGTGCGCACCAAACAAACCCGTGTATTGGCTTTCAGCGCTGCCGCTTCCCAACGCCGACACAAACGGGCGGCGAAGTTGCCTACGGGTGGGCTATGTTCGTCAATGATCTGTTCGCCGCAATCGCCGTAATACCCCGTCGCCGAACCGGAAATA  <  1/1246551‑1246304
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
AATCACCGCCTTGGCACGCCACCCCGCCAAGGCGCAAAAACAACTTCCCAAAAATATTGAATTGATTAATACATTGGATTATTTTCAGCATTTCAATCAATTTGACGCCATTATTAATTTGGCGGGCGAGCCGATTTTTGCCCGCCGTTGGACGGAAATCCAAAAAGTGCGGTTGGAATCCAGCCGCGTTTCTTTAACGGAAAAACTGGCGCAACTCATTAACCGCAGCGATGATCCGCCGCAATATTG                                                                                                                                                                                                                                                      >  1:821138/1‑249
            GGCACGCCACCCCGCCAAGGCGCAAAAACAACTTCCCAAAAATATTGAATTGATTAATACATTGGATTATTTTCAGCATTTCAATCAATTTGACGCCATTATTAATTTGGCGGGCGAGCCGATTTTTGCCCGCCGTTGGACGGAAATCCAAAAAGTGCGGTTGGAATCCAGCCGCGTTTCTTTAACGGAAAAACTGGCGCAACTCATTAACCGCAGCGATGATCCGCCGCAATATTGCTTGCCTGTGCTTA                                                                                                                                                                                                                                        >  1:509583/1‑251
                                                                           GGATTATTTTCAGCATTTCAATCAATTTGACGCCATTATTAATTTGGCGGGCGAGCCGATTTTTGCCCGCCGTTGGACGGAAATCCAAAAAGTGCGGTTGGAATCCAGCCGCGTTTCTTTAACGGAAAAACTGGCGCAACTCATTAACCGCAGCGATGATCCGCCGC                                                                                                                                                                                                                                                             >  1:663277/1‑167
                                                                                                                                                CCGTTGGACGGAAATCCAAAAAGTGCGGTTGGAATCCAGCCGCGTTTCTTTAACGGAAAAACTGGCGCAACTCATTAACCGCAGCGATGATCCGCCGCAATATTGCTTGCCTGTGCTTAATTTTACACCCAATCCGCAACGATATAACGGCAGCATTTGCGCCAGCGCGCCACCTTGTGTGCCGAGCACAATGCCCGTGCGCACCAAACAAACCCGTGTATTGGCTTTCAGCGCTGCCGCTTCCCAACGC                                                                                                     >  1:608914/1‑250
                                                                                                                                                 CGTTGGACGGAAATCCAAAAAGTGCGGTTGGAATCCAGCCGCGTTTCTTTAACGGAAAAACTGGCGCAACTCATTAACCGCAGCGATGATCCGCCGCAATATTGCTTGCCTGTGCTTAATTTTACACCCAATCCGCAACGATATAACGGCAGCATTTGCGCCAGCGCGCCACCTTGTGTGCCGAGCACAATGCCCGTGCGCACCAAACAAACCCGTGTATTGGCTTTCAGCGC                                                                                                                     <  1:255979/233‑1
                                                                                                                                                             ATCCAAAAAGTGCGGTTGGAATCCAGCCGCGTTTCTTTAACGGAAAAACTGGCGCAACTCATTAACCGCAGCGATGATCCGCCGCAATATTGCTTGCCTGTGCTTAATTTTACACCCAATCCGCAACGATATAACGGCAGCATTTGCGCCAGCGCGCCACCTTGTGTGCCGAGCACAATGCCCGTGCGCACCAAACAAACCCGTGTATTGGCTTTCAGCGCTGCCGCTTCCCAACGCCGACACAAACGGGC                                                                                       <  1:734566/251‑1
                                                                                                                                                                                                                                                 CAATATTGCTTGCCTGTGCTTAATTTTACACCCAATCCGCAACGATATAACGGCAGCATTTGCGCCAGCGCGCCACCTTGTGTGCCGAGCACAATGCCCGTGCGCACCAAACAAACCCGTGTATTGGCTTTCAGCGCTGCCGCTTCCCAACGCCGACACAAACGGGCGGCGAAGTTGCCTACGGGTGGGCTATGTTCGTCAATGATCTGTTCGCCGCAATCGCCGTAATACCC                     <  1:236508/233‑1
                                                                                                                                                                                                                                                  AATATTGCTTGCCTGTGCTTAATTTTACACCCAATCCGCAACGATATAACGGCAGCATTTGCGCCAGCGCGCCACCTTGTGTGCCGAGCACAATGCCCGTGCGCACCAAACAAACCCGTGTATTGGCTTTCAGCGCTGCCGCTTCCCAACGCCGACACAAACGGGCGGCAAAGTTGCCTACGGGTGGGCTATGTTCGTCAATGATCTGTTCGCCGCAATCGCCGTAATACCCCGTCGCCGAACCGGAAATA  >  1:430339/1‑251
                                                                                                                                                                                                                                                  AATATTGCTTGCCTGTGCTTAATTTTACACCCAATCCGCAACGATATAACGGCAGCATTTGCGCCAGCGCGCCACCT                                                                                                                                                                                >  1:199523/1‑77
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
AATCACCGCCTTGGCACGCCACCCCGCCAAGGCGCAAAAACAACTTCCCAAAAATATTGAATTGATTAATACATTGGATTATTTTCAGCATTTCAATCAATTTGACGCCATTATTAATTTGGCGGGCGAGCCGATTTTTGCCCGCCGTTGGACGGAAATCCAAAAAGTGCGGTTGGAATCCAGCCGCGTTTCTTTAACGGAAAAACTGGCGCAACTCATTAACCGCAGCGATGATCCGCCGCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  1/1246055‑1246299
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caatATTGCTTGCCTGTGCTTAATTTTACACCCAATCCGCAACGATATAACGGCAGCATTTGCGCCAGCGCGCCACCTTGTGTGCCGAGCACAATGCCCGTGCGCACCAAACAAACCCGTGTATTGGCTTTCAGCGCTGCCGCTTCCCAACGCCGACACAAACGGGCGGCGAAGTTGCCTACGGGTGGGCTATGTTCGTCAATGATCTGTTCGCCGCAATCGCCGTAATACCCCGTCGCCGAACCGGAAATA  <  1/1246551‑1246304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.