| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 551,141 | G→A | intergenic (‑156/+162) | unknown ← / ← unknown | hypothetical protein/Serine hydroxymethyltransferase (EC 2.1.2.1) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 551,141 | 0 | G | A | 100.0% | 18.1 / NA | 7 | intergenic (‑156/+162) | unknown/unknown | hypothetical protein/Serine hydroxymethyltransferase (EC 2.1.2.1) |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (4/3); total (4/3) | |||||||||||
GCATATTCTGTACTGGACATACTCGTTTTCCTTTTTCTTAGGGTTAATACTTAAGATAACCTTTGACCGGATAAATTACCTAGTTTTGGTTAATTTTGGAGACTAATTTACTCCGGATTCTTTAATAGTCAATAGAAAAAATTATTTAATTTCATAAAATTATTAGTTTTTTGATGATACTTTATCTACGCAATCCCGTATTGTATTAATACGCAAAAATTAGACTGAGAAAATACTGTTATCAGGTTTTGATCTGTAAGATTTTGACTGTCATATTTCTCAAAAAGAAAAAGCGGCAATTTTCATTACCGCTTTGTTTTTTTTCATTTGATTAAAATTACGCGTAAACCGGAAGACGTTTACAAATTGCCAAGACTTTGTC > 1/550966‑551347 | gCATATTCTGTACTGGACATACTCGTTTTCCTTTTTCTTAGGGTTAATACTTAAGATAACCTTTGACCGGATAAATTACCTAGTTTTGGTTAATTTTGGAGACTAATTTACTCCGGATTCTTTAATAGTCAATAGAAAAAATTATTTAATTTCATAAAATTATTAGTTTTTTGATAATACTTTATCTACGCAATCCCGTATTGTATTAATACGCAAAAATTAGAc > 1:284730/1‑225 (MQ=255) gACATACTCGTTTTCCTTTTTCTTAGGGTTAATACTTAAGATAACCTTTGACCGGATAAATTACCTAGTTTTGGTTAATTTTGGAGACTAATTTACTCCGGATTCTTTAATAGTCAATAGAAAAAATTATTTAATTTCATAAAATTATTAGTTTTTTGATAATACTTTATCTACGCAATCCCGTATTGTATTAATACGCAAAAATTAGACTGAGAAAATAc < 1:290437/221‑1 (MQ=255) aCTTAAGATAACCTTTGACCGGATAAATTACCTAGTTTTGGTTAATTTTGGAGACTAATTTACTCCGGATTCTTTAATAGTCAATAGAAAAAATTATTTAATTTCATAAAATTATTAGTTTTTTGATAATACTTTATCTACGCAATCCCgtat > 1:204160/1‑153 (MQ=255) gTTTTGGTTAATTTTGGAGACTAATTTACTCCGGATTCTTTAATAGTCAATAGAAAAAATTATTTAATTTCATAAAATTATTAGTTTTTTGATAATACTTTATCTACGCAATCCCGTATTGTATTAATACGCAAAAATTAGACTGAGAAAATAc < 1:189411/154‑1 (MQ=255) cTTTAATAGTCAATAGAAAAAATTATTTAATTTCATAAAATTATTAGTTTTTTGATAATACTTTATCTACGCAATCCCGTATTGTATTAATACGCAAAAATTAGAc > 1:13098/1‑106 (MQ=255) tCAATAGAAAAAATTATTTAATTTCATAAAATTATTAGTTTTTTGATAATACTTTATCTACGCAATCCCGTATTGTATTAATACGCAAAAATTAGACTGAGAAAATACTGTTATCAGGTTTTGATCTGTAAGATTTTGACTGTCATATTTCTCAAAAAGAAAAAGCGGCAATTTTCATTACCGCTTTGTTTTTTTTCATTTGATTAAAATTACGCGTAAACCGGAAGACGTTTACAAATTGCCAAGACt < 1:746288/249‑1 (MQ=255) tAGAAAAAATTATTTAATTTCATAAAATTATTAGTTTTTTGATAATACTTTATCTACGCAATCCCGTATTGTATTAATACGCAAAAATTAGACTGAGAAAATACTGTTATCAGGTTTTGATCTGTAAGATTTTGACTGTCATATTTCTCAAAAAGAAAAAGCGGCAATTTTCATTACCGCTTTGTTTTTTTTCATTTGATTAAAATTACGCGTAAACCGGAAGACGTTTACAAATTGCCAAGACTTTGt > 1:395853/1‑249 (MQ=255) tgataaTACTTTATCTACGCAATCCCGTATTGTATTAATACGCAAAAATTAGACTGAGAAAATACTGTTATCAGGTTTTGATCTGTAAGATTTTGACTGTCATATTTCTCAAAAAGAAAAAGCGGCAATTTTCATTACCGCTTTGTTTTTTTTCATTTGATTAAAATTACGCGTAAACCGGAAGACGTTTACAAATTGCCAAGACTTTGTc < 1:730623/211‑1 (MQ=255) | GCATATTCTGTACTGGACATACTCGTTTTCCTTTTTCTTAGGGTTAATACTTAAGATAACCTTTGACCGGATAAATTACCTAGTTTTGGTTAATTTTGGAGACTAATTTACTCCGGATTCTTTAATAGTCAATAGAAAAAATTATTTAATTTCATAAAATTATTAGTTTTTTGATGATACTTTATCTACGCAATCCCGTATTGTATTAATACGCAAAAATTAGACTGAGAAAATACTGTTATCAGGTTTTGATCTGTAAGATTTTGACTGTCATATTTCTCAAAAAGAAAAAGCGGCAATTTTCATTACCGCTTTGTTTTTTTTCATTTGATTAAAATTACGCGTAAACCGGAAGACGTTTACAAATTGCCAAGACTTTGTC > 1/550966‑551347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |