| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 512,787 | G→A | M354I (ATG→ATA) | unknown → | Protein translocase subunit SecD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 512,787 | 0 | G | A | 100.0% | 283.4 / NA | 83 | M354I (ATG→ATA) | unknown | Protein translocase subunit SecD |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (47/36); total (47/36) | |||||||||||
TCTCGGTGCAACGGCTACCCTTGAATTTCGTATAGTTAATGCAAGCGCTAATTTAGAAGCGGCAGCGCGTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATGTCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGACTCCCCGGCAGAAGCACAAAACCTTGCCGTGCTACTCCGTTCCGGTGCGTTAATTGCGCCAATTCAAATT > 1/512541‑513033 | tctcGGTGCAACGGCTACCCTTGAATTTCGTATAGTTAATGCAAGCGCTAATTTAGAAGCGGCAGCGCGTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATcac < 1:679707/251‑1 (MQ=255)tctcGGTGCAACGGCTACCCTTGAATTTCGTATAGTTAATGCAAGCGCTAATTTAGAAGCGGCAGCGCGTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATcac < 1:474729/251‑1 (MQ=255) gCTACCCTTGAATTTCGTATAGTTAATGCAAGCGCTAATTTAGAAGCGGCAGCGCGTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGtt < 1:362965/250‑1 (MQ=255) tCGTATAGTTAATGCAAGCGCTAATTTAGAAGCGGCAGCGCGTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAAc < 1:740317/251‑1 (MQ=255) taGTTAATGCAAGCGCTAATTTAGAAGCGGCAGCGCGTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATg > 1:628679/1‑251 (MQ=255) gTTAATGCAAGCGCTAATTTAGAAGCGGCAGCGCGTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATgg > 1:885968/1‑250 (MQ=255) cgcTAATTTAGAAGCGGCAGCGCGTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAAcc > 1:742241/1‑224 (MQ=255) cgcTAATTTAGAAGCGGCAGCGCGTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTatat < 1:171878/250‑1 (MQ=255) cgcTAATTTAGAAGCGGCAGCGCGTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATg < 1:883749/251‑1 (MQ=255) aTTTAGAAGCGGCAGCGCGTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGaa > 1:578238/1‑251 (MQ=255) tAGAAGCGGCAGCGCGTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAatat < 1:813/251‑1 (MQ=255) cGGCAGCGCGTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGAc < 1:272547/251‑1 (MQ=255) cGGCAGCGCGTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGAc < 1:815089/251‑1 (MQ=255) cGGCAGCGCGTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGAc < 1:790867/251‑1 (MQ=255) gcgTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTa > 1:855128/1‑251 (MQ=255) gTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTaaa > 1:184120/1‑251 (MQ=255) gTATGGTGCCTTCCGATTTCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAaccacc < 1:435312/188‑1 (MQ=255) gTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAAcc > 1:65721/1‑198 (MQ=255) aTGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGa > 1:13492/1‑251 (MQ=255) gTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGa > 1:383164/1‑251 (MQ=255) gTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAAcc > 1:792340/1‑185 (MQ=255) gTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCAtttt > 1:823208/1‑251 (MQ=255) cGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGAc < 1:394672/208‑1 (MQ=255) cAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGaa > 1:455411/1‑168 (MQ=255) aGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGAc < 1:119698/204‑1 (MQ=255) gAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTatat > 1:5722/1‑188 (MQ=255) aaCAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACgaaga < 1:497192/251‑1 (MQ=255) cAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGCTGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGaagaag > 1:442048/1‑251 (MQ=255) cAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGAc < 1:400419/199‑1 (MQ=255) gTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCAtt > 1:605466/1‑251 (MQ=255) gtggtgTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGt > 1:901210/1‑251 (MQ=255) gtgtTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGt > 1:899687/1‑173 (MQ=255) gtgtTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAg > 1:738553/1‑175 (MQ=255) gtgtTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGAc < 1:205925/186‑1 (MQ=255) gtgtTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGAc > 1:606201/1‑186 (MQ=255) ttATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGt < 1:107042/170‑1 (MQ=255) ttATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAatat < 1:442152/177‑1 (MQ=255) atataAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGt < 1:886718/168‑1 (MQ=255) atataAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGAc < 1:833431/181‑1 (MQ=255) atataAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTa > 1:459257/1‑251 (MQ=255) atataAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTa > 1:887246/1‑251 (MQ=255) taAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGTGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTc < 1:442073/251‑1 (MQ=255) gcAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCg > 1:407136/1‑251 (MQ=255) cAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGt > 1:506229/1‑251 (MQ=255) ggaCTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGttt > 1:704601/3‑251 (MQ=255) gTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAg > 1:565890/1‑157 (MQ=255) gTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGttt > 1:892154/1‑251 (MQ=255) gTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGttt > 1:355439/1‑251 (MQ=255) gTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACgaaga > 1:731270/1‑211 (MQ=255) gTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGt > 1:516538/1‑251 (MQ=255) ggCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCa > 1:274745/1‑251 (MQ=255) gCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATaaa > 1:632110/1‑151 (MQ=255) gCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTc > 1:86878/1‑250 (MQ=255) caTTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAGACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCaaa > 1:438446/1‑251 (MQ=255) caTTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCaaa > 1:541296/1‑251 (MQ=255) aTTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAAt < 1:191996/251‑1 (MQ=255) aCCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACgaaga < 1:297236/197‑1 (MQ=255) aCCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTa > 1:722978/1‑250 (MQ=255) aCCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTa > 1:417928/1‑250 (MQ=255) cAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCg < 1:310255/251‑1 (MQ=255) aTGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTcggtaacacgttt > 1:99902/1‑239 (MQ=255) tGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGAcc < 1:228369/121‑1 (MQ=255) tGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTc > 1:478305/1‑215 (MQ=255) cAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCg > 1:763597/1‑251 (MQ=255) gCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGa > 1:325729/1‑250 (MQ=255) cTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGa > 1:249102/1‑249 (MQ=255) gATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGt > 1:619244/1‑113 (MQ=255) aaaCACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGAc > 1:297944/1‑121 (MQ=255) tcgtTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAg < 1:741503/103‑1 (MQ=255) tcgtTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGACTCCCCGGCAGAAGCACAAAAcc < 1:313477/250‑1 (MQ=255) tcgtTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGACTCCCCGGCAGAAGCACAAAAc > 1:472205/1‑249 (MQ=255) ccGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGACTCCCCGGCAGAAGCACAAAAc < 1:728946/243‑1 (MQ=255) ccGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGACTCCCCGGCAGAAGCACAAAACCTTGCCg < 1:16571/250‑1 (MQ=255) tGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGACTCCCCGGCAGAAGCACAAAACCTTGCCGTGCTACTc < 1:809952/251‑1 (MQ=255) tGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGACTCCCCGGCAGAAGCACAAAACCTTGCCGTGCTACTc < 1:193545/251‑1 (MQ=255) tGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGACTCCCCGGCAGAAGCACAAAACCTTGCCGTGCTACTc < 1:550573/251‑1 (MQ=255) aGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATATCCCAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGACTCCCCGGCAGAAGCACAAAACCTTGCCGTGCTACTcc < 1:282477/250‑1 (MQ=255) aCCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCTGTCAATTCCAAATTACCGGTATCGACTCCCCGGCAGAAGCACAAAACCTTGCCGTGCTACTCCGTTCCgg > 1:165588/1‑251 (MQ=255) aCCTTGGATAGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGATCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGACTCCCCGGCAGAAGCACAAAACCTTGCCGTGCTACTCCGTTCCgg > 1:444280/1‑251 (MQ=255) aGCGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGACTCCCCGGCAGAAGCACAAAACCTTGCCGTGCTACTCCGTTCCGGTGCGTTAAt > 1:199656/1‑251 (MQ=255) cGAGGGCGGCGAAATCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAGACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGACTCCCCGGCAGAAGCACAAAACCTTGCCGTGCTACTCCGTTCCGGTGCGTTAAt < 1:622039/249‑1 (MQ=255) aTCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGACTCCCCGGCAGAAGCACAAAACCTTGCCGTGCTACTCCGTTCCGGTGCGTTAATTGCGCCAATTCAAAt < 1:776557/251‑1 (MQ=255) tCATATCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGACTCCCCGGCAGAAGCACAAAACCTTGCCGTGCTACTCCGTTCCGGTGCGTTAATTGCGCCAATTCAAAtt < 1:873679/251‑1 (MQ=255) | TCTCGGTGCAACGGCTACCCTTGAATTTCGTATAGTTAATGCAAGCGCTAATTTAGAAGCGGCAGCGCGTGGTATGGTGCCTTCCGATTCCGAAGTCAAATACGACAGAAACAATCGTCCTGTGGTGTTATATAAACGCGCAGTACTCGGTGGCGAGCACATTACCAATGCCAGCTCCGGTGTCGATCAAAACACGTCGTTGCCGCAAGTGAGCGTGACCTTGGATAGCGAGGGCGGCGAAATCATGTCACAAACCACCCGTTTAAACCTGAAAAAACCGATGGCGACCTTATATGTAGAATATAAAGACAGCGGTAAAAAAGACGAAAACGGTAAAACCATTTTACAAAAACACGAAGAAGTCATTAACGTCGCGACTATTCAAGGTCGTTTCGGCAGTCAATTCCAAATTACCGGTATCGACTCCCCGGCAGAAGCACAAAACCTTGCCGTGCTACTCCGTTCCGGTGCGTTAATTGCGCCAATTCAAATT > 1/512541‑513033 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |