| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,877,073 | T→C | T101A (ACG→GCG) | unknown ← | Toxin HigB / Protein kinase domain of HipA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,877,073 | 0 | T | C | 100.0% | 252.5 / NA | 73 | T101A (ACG→GCG) | unknown | Toxin HigB / Protein kinase domain of HipA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (37/36); total (37/36) | |||||||||||
ATTCGTTCTCGCAATTATGGGAAAGATTAAGTTGCTCCTGCCCGACGATACCGATAGGTAATTTAAAAATATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGTATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATGGGATAAAGGCAATGATAATGAAATTGGACGGGAGCGCGCAGAATC > 1/1876826‑1877319 | aTTCGTTCTCGCAATTATGGGAAAGATTAAGTTGCTCCTGCCCGACGATACCGATAGGTAATTTAAAAATATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGcata > 1:475696/1‑251 (MQ=255) tCGTTCTCGCAATTATGGGAAAGATTAAGTTGCTCCTGCCCGACGATACCGATAGGTAATTTAAAAATATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATaaa < 1:552250/251‑1 (MQ=255) cGCAATTATGGGAAAGATTAAGTTGCTCCTGCCCGACGATACCGATAGGTAATTTAAAAATATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCg < 1:597276/251‑1 (MQ=255) cAATTATGGGAAAGATTAAGTTGCTCCTGCCCGACGATACCGATAGGTAATTTAAAAATATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGaa > 1:585328/1‑251 (MQ=255) aTTATGGGAAAGATTAAGTTGCTCCTGCCCGACGATACCGATAGGTAATTTAAAAATATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACa > 1:603237/1‑251 (MQ=255) agactAAGTTGCTCCTGCCCGACGATACCGATAGGTAATTTAAAAATATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACttt > 1:841452/5‑251 (MQ=255) cTGCCCGACGATACCGATAGGTAATTTAAAAATATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGt < 1:791411/251‑1 (MQ=255) cccGACGATACCGATAGGTAATTTAAAAATATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTg < 1:182858/250‑1 (MQ=255) ccGATAGGTAATTTAAAAATATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCaa > 1:232112/1‑251 (MQ=255) aTAGGTAATTTAAAAATATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGc < 1:699908/251‑1 (MQ=255) aTAGGTAATTTAAAAATATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGc < 1:591188/251‑1 (MQ=255) tAATTTAAAAATATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATcc < 1:479737/251‑1 (MQ=255) tAATTTAAAAATATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATcc < 1:247303/251‑1 (MQ=255) tAAAAATATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTc < 1:805950/251‑1 (MQ=255) aaaTATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAAt < 1:867386/251‑1 (MQ=255) ggggAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCa > 1:808790/1‑251 (MQ=255) ggAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGt > 1:384881/1‑204 (MQ=255) gAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACtt < 1:638480/188‑1 (MQ=255) aTGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTc < 1:893026/227‑1 (MQ=255) aTGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAggg > 1:500022/1‑251 (MQ=255) gTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGc < 1:345305/169‑1 (MQ=255) gTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGt < 1:887198/199‑1 (MQ=255) gTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAAt > 1:863955/1‑204 (MQ=255) gTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAAt < 1:464544/228‑1 (MQ=255) gTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAggggg > 1:77945/1‑251 (MQ=255) aCATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGt > 1:355254/1‑251 (MQ=255) aCATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCGCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTGGAATCGCCCCAACGCAAGCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGt < 1:481141/251‑1 (MQ=255) tccATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCACGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAgg < 1:447032/250‑1 (MQ=255) gATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCg > 1:286201/1‑188 (MQ=255) gATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGa > 1:10914/1‑251 (MQ=255) aTTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGaa < 1:36779/251‑1 (MQ=255) tttGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGaaa > 1:832585/1‑250 (MQ=255) aTAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTg > 1:721267/1‑251 (MQ=255) tagtagAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTg > 1:307979/1‑250 (MQ=255) gtagagtagaGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGaa > 1:812856/1‑242 (MQ=255) gtagagtagaGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACg > 1:359970/1‑245 (MQ=255) gtagagtagaGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTg > 1:465912/1‑248 (MQ=255) tagagtagagCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAGGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTg < 1:745852/250‑1 (MQ=255) agagtagagCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATaaa > 1:623276/1‑134 (MQ=255) gagtagagCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGc > 1:877871/1‑184 (MQ=255) gagtagagCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAAt < 1:853478/197‑1 (MQ=255) gagtagagCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGaa > 1:780775/1‑250 (MQ=255) agtagagCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGaa < 1:588831/249‑1 (MQ=255) gtagagCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGACTCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATg > 1:432352/1‑250 (MQ=255) gTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGaa > 1:624453/1‑229 (MQ=255) gTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGa > 1:627162/1‑251 (MQ=255) cTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTc < 1:483566/251‑1 (MQ=255) gtgtgCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAAt < 1:513395/114‑1 (MQ=255) aGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGt > 1:633832/1‑196 (MQ=255) ggTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGc > 1:764838/1‑149 (MQ=255) gTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAAtt > 1:133984/1‑83 (MQ=255) cttcCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGaaa < 1:738272/184‑1 (MQ=255) cttcCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAAc < 1:571087/185‑1 (MQ=255) aaaGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACt < 1:240237/251‑1 (MQ=255) cGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATgg < 1:360384/251‑1 (MQ=255) aGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATGGGATa > 1:182575/1‑251 (MQ=255) tttCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAAtt < 1:741931/177‑1 (MQ=255) tttCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGC‑AATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATGGGATAAAGGc < 1:601424/251‑1 (MQ=255) ttACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGa > 1:90759/1‑186 (MQ=255) ttACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACt < 1:870313/225‑1 (MQ=255) ttACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATGGGATAAAGGCAATGATAATGa > 1:429860/1‑251 (MQ=255) ttACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATGGGATAAAGGCAATGATAATGa < 1:691243/251‑1 (MQ=255) tACACTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATGGGATAAAGGCAATGATAATGaa < 1:323002/251‑1 (MQ=255) cacTTCTTATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTc > 1:36774/1‑167 (MQ=255) cttcttATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGc > 1:488739/1‑80 (MQ=255) cttcttATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATGGGATAAAgg > 1:79693/1‑234 (MQ=255) cttcttATCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATGGGATAAAGGCAATGATAATGAAATTg > 1:582525/1‑251 (MQ=255) tCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATGGGATAAAGGCAATGATAATGaaa < 1:429840/241‑1 (MQ=255) tCATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCG‑CCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATGGGATAAAGGCAATGATAATGAAATTGGACGGGAg < 1:374455/251‑1 (MQ=255) cATTTAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATGGGATAAAGGCAATGATAATGAAATTGGACGGGAg < 1:783795/251‑1 (MQ=255) tttAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATGGGATAAAGGc > 1:679847/1‑225 (MQ=255) tttAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATGGGATAAAGGCAATGATAATGAAATTGGACGGGAgcg > 1:338187/1‑251 (MQ=255) tAACGGCTCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGATCGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATGGGATAAAGGCAATGATAATGAAATTGGACGGGAgcgcg > 1:458255/1‑251 (MQ=255) tCCGCATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATGGGATAAAGGCAATGATAATGAAATTGGACGGGAGCGCGCAGAATc < 1:19484/251‑1 (MQ=255) | ATTCGTTCTCGCAATTATGGGAAAGATTAAGTTGCTCCTGCCCGACGATACCGATAGGTAATTTAAAAATATGGCTGGTAGCGGGGAATGTAGGGGACATTACCATTGATTTTGATAGTAGAGTAGAGCCGTTTTTTCCTGTGTGCCGACAAGCGAAATGAGAAAATCATCGGTTTCTTCCATGCCTAACGGAAAAGTGCGGTAGTTTTTCAACACGTTTTACACTTCTTATCATTTAACGGCTCCGTATAAATTTGCCGAACAGAGCGACTTTCACCGTGATAAAGTTGAATCGCCCCAACGCAATCCTGCTCAATAGCCGAAAGCAAATCAAAGGGGGATTTGGTCGAGGTCTGGAAACGTTGCTGAATGCGTGAACGAATTTGTTCATTGTCGGGCAAAAGATTATCGAAGAAATTGTAAACCGAATCCTCTCGGTAAACTTTATGGGATAAAGGCAATGATAATGAAATTGGACGGGAGCGCGCAGAATC > 1/1876826‑1877319 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |