Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 355,190 T→C L370L (CTA→CTG)  unknown ← D‑glycero‑beta‑D‑manno‑heptose 1‑phosphate adenylyltransferase (EC 2.7.7.70) / D‑glycero‑beta‑D‑manno‑heptose‑7‑phosphate kinase (EC 2.7.1.167)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1355,1900TC100.0% 269.7 / NA 77L370L (CTA→CTG) unknownD‑glycero‑beta‑D‑manno‑heptose 1‑phosphate adenylyltransferase (EC 2.7.7.70) / D‑glycero‑beta‑D‑manno‑heptose‑7‑phosphate kinase (EC 2.7.1.167)
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (37/40);  total (37/40)

CATCACCGCCGTTCGCCCACACTTCTTTGCTACCGGCAATCTCTTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATTAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCACGACGATACCGGCGGCGAC  >  1/354943‑355435
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                     
cATCACCGCCGTTCGCCCACACTTCTTTGCTACCGGCAATCTCTTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAgg                                                                                                                                                                                                                                                    <  1:281942/251‑1 (MQ=255)
  tCACCGCCGTTCGCCCACACTTCTTTGCTACCGGCAATCTCTTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCg                                                                                                                                                                                                                                                  >  1:260513/1‑251 (MQ=255)
     ccgccgTTCGCCCACACTTCTTTGCTACCGGCAATCTCTTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGAt                                                                                                                                                                                                                                                >  1:600820/1‑250 (MQ=255)
        ccgTTCGCCCACACTTCTTTGCTACCGGCAATCTCTTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCTGTATTCACCGCAACAATCAGGCGATCGc                                                                                                                                                                                                                                             >  1:721958/1‑250 (MQ=255)
                   cacTTCTTTGCTACCGGCAATCTCTTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCg                                                                                                                                                                                                                                                  >  1:506069/1‑234 (MQ=255)
                                 cGGCAATCTCTTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATAc                                                                                                                                                                                                                   <  1:141934/251‑1 (MQ=255)
                                        ctctTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACggg                                                                                                                                                                                                                                 >  1:501520/1‑230 (MQ=255)
                                           ttCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGAc                                                                                                                                                                                                         <  1:738978/251‑1 (MQ=255)
                                                 cTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGa                                                                                                                                                                                                    <  1:392306/250‑1 (MQ=255)
                                                      aaTCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCaaa                                                                                                                                                                                              <  1:705012/251‑1 (MQ=255)
                                                              ccTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAgg                                                                                                                                                                                                                                                    <  1:43655/189‑1 (MQ=255)
                                                                   cACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAaacaa                                                                                                                                                                                  >  1:416615/1‑250 (MQ=255)
                                                                           aaTCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGTAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATCCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTc                                                                                                                                                                         <  1:454523/251‑1 (MQ=255)
                                                                           aaTCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGAc                                                                                                                                                                                                         >  1:497416/1‑219 (MQ=255)
                                                                                     cacTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGAc                                                                                                                                                                                                         >  1:814883/1‑209 (MQ=255)
                                                                                         tCACCGATTAAACGCTGTGGCGTATCTTCACCGAATGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGAc                                                                                                                                                                                                         <  1:454838/205‑1 (MQ=255)
                                                                                         tCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTc                                                                                                                                                                         <  1:333850/237‑1 (MQ=255)
                                                                                               aTTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACg                                                                                                                                                     >  1:468635/1‑251 (MQ=255)
                                                                                               aTTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACg                                                                                                                                                     >  1:519626/1‑251 (MQ=255)
                                                                                               aTTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCC‑AATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGa                                                                                                                                                    >  1:222005/1‑251 (MQ=255)
                                                                                                      gCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATcc                                                                                                                                                                                                                         >  1:376099/1‑176 (MQ=255)
                                                                                                      gCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGAc                                                                                                                                                                                                         <  1:406477/192‑1 (MQ=255)
                                                                                                           ggCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCaaa                                                                                                                                                                                                                                         >  1:616513/1‑155 (MQ=255)
                                                                                                           ggCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAg                                                                                                                                         >  1:884032/1‑251 (MQ=255)
                                                                                                            gCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAaac                                                                                                                                                                                    <  1:187235/207‑1 (MQ=255)
                                                                                                                   ttCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACgg                                                                                                                                 <  1:700679/251‑1 (MQ=255)
                                                                                                                           aCGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTc                                                                                                                         <  1:748517/251‑1 (MQ=255)
                                                                                                                           aCGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTc                                                                                                                         <  1:608274/251‑1 (MQ=255)
                                                                                                                              gCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATc                                                                                                                                                                                         <  1:777130/184‑1 (MQ=255)
                                                                                                                              gCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCt                                                                                                                                                 <  1:853471/224‑1 (MQ=255)
                                                                                                                              gCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGt                                                                                                                      >  1:6269/1‑251 (MQ=255)
                                                                                                                                accaaccaGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTc                                                                                                                    <  1:675125/251‑1 (MQ=255)
                                                                                                                                   aaccaGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGCCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCg                                                                                                                  >  1:597077/1‑250 (MQ=255)
                                                                                                                                     ccaGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCtt                                                                                                               <  1:224012/251‑1 (MQ=255)
                                                                                                                                     ccaGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCtt                                                                                                               <  1:743148/251‑1 (MQ=255)
                                                                                                                                        gTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACg                                                                                                                                                                   >  1:741995/1‑196 (MQ=255)
                                                                                                                                        gTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACg                                                                                                                                  >  1:269424/1‑229 (MQ=255)
                                                                                                                                        gTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCgg                                                                                                            >  1:765738/1‑251 (MQ=255)
                                                                                                                                        gTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGCACGCTCCTCGACTTTTAGGCGCTTTACCGAAACGTCCGTATTCACCGCCACAATCAGGCGATCGCCAAATTTACGCGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTATTCACCACGATATATCGACAGCTTAAAGGTCTCTTTCAGTTCCgatttgg                                                                                                            >  1:483974/1‑245 (MQ=255)
                                                                                                                                                     aGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATc                                                                                                                                                                                         >  1:167805/1‑161 (MQ=255)
                                                                                                                                                                cACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGt                                                                                                                      <  1:690944/217‑1 (MQ=255)
                                                                                                                                                                  ccGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGtt                                                                                  >  1:318092/1‑251 (MQ=255)
                                                                                                                                                                    gCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAaacaac                                                                                                                                                                                 <  1:402349/154‑1 (MQ=255)
                                                                                                                                                                    gCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACgg                                                                                                                                 >  1:42531/1‑202 (MQ=255)
                                                                                                                                                                      cATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTGTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGc                                                                              <  1:550643/251‑1 (MQ=255)
                                                                                                                                                                        tGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCa                                                                            <  1:527341/251‑1 (MQ=255)
                                                                                                                                                                        tGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCa                                                                            <  1:592604/251‑1 (MQ=255)
                                                                                                                                                                            ggAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGa                                                                         <  1:8056/250‑1 (MQ=255)
                                                                                                                                                                              aaGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAAt                                                                       <  1:640136/250‑1 (MQ=255)
                                                                                                                                                                              aaGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATg                                                                      >  1:639716/1‑251 (MQ=255)
                                                                                                                                                                                gCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAgc                                                                                             >  1:391115/1‑226 (MQ=255)
                                                                                                                                                                                gCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATgg                                                                     >  1:318731/1‑250 (MQ=255)
                                                                                                                                                                                 ccAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCa                                                                   >  1:373967/1‑251 (MQ=255)
                                                                                                                                                                                                 aCGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACgg                                                   <  1:71042/251‑1 (MQ=255)
                                                                                                                                                                                                    ctcctcGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGAc                                                                                                                                                                                                         <  1:596805/98‑1 (MQ=255)
                                                                                                                                                                                                    ctcctcGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTg                                                >  1:37740/1‑251 (MQ=255)
                                                                                                                                                                                                               ttAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGAc                                     <  1:415721/251‑1 (MQ=255)
                                                                                                                                                                                                                tAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACg                                    <  1:269354/251‑1 (MQ=255)
                                                                                                                                                                                                                tAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACg                                    <  1:639051/251‑1 (MQ=255)
                                                                                                                                                                                                                tAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACg                                    <  1:664178/251‑1 (MQ=255)
                                                                                                                                                                                                                tAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACg                                    <  1:333597/251‑1 (MQ=255)
                                                                                                                                                                                                                   gCGTTTTACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTg                                  >  1:266210/1‑250 (MQ=255)
                                                                                                                                                                                                                        ttACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAAt                            >  1:725324/1‑251 (MQ=255)
                                                                                                                                                                                                                        ttACCGAATCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAAt                            >  1:83790/1‑251 (MQ=255)
                                                                                                                                                                                                                              aaTCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGcc                       <  1:819737/250‑1 (MQ=255)
                                                                                                                                                                                                                              aaTCGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGcc                       >  1:789958/1‑250 (MQ=255)
                                                                                                                                                                                                                                 cGTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCacg                   >  1:303119/1‑251 (MQ=255)
                                                                                                                                                                                                                                  gTCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCacga                  >  1:173533/1‑251 (MQ=255)
                                                                                                                                                                                                                                   tCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTcc                                                             <  1:201753/207‑1 (MQ=255)
                                                                                                                                                                                                                                   tCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCacgac                 <  1:519586/251‑1 (MQ=255)
                                                                                                                                                                                                                                   tCCGTATTCACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCacga                  >  1:12133/1‑250 (MQ=255)
                                                                                                                                                                                                                                           cACCGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCACGACGATACcgg         >  1:624962/1‑251 (MQ=255)
                                                                                                                                                                                                                                             ccGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTcc                                                             <  1:276217/197‑1 (MQ=255)
                                                                                                                                                                                                                                             ccGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACg                                    >  1:146447/1‑222 (MQ=255)
                                                                                                                                                                                                                                             ccGCAACAATCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCACGACGATAc            <  1:290192/246‑1 (MQ=255)
                                                                                                                                                                                                                                                 aacaaTCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGA‑TTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCACGACGATACCGGCGGCGAc  <  1:563250/251‑1 (MQ=255)
                                                                                                                                                                                                                                                  acaaTCAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCACGACGATACCGGCGGCGAc  <  1:544701/251‑1 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                     
CATCACCGCCGTTCGCCCACACTTCTTTGCTACCGGCAATCTCTTCCGGCTTGTAATCGCCGCCTTTCACCAATAAATCCGGCAACACTTCACCGATTAAACGCTGTGGCGTATCTTCACCGAACGGCACCAACCAGTCCACAGAAGAAAGCCCGGCAAGCACCGCCATGCGGGAAGCCAAATTATTGATCGGACGCTCCTCGCCTTTTAGGCGTTTTACCGAATCGTCCGTATTCACCGCAACAATTAGGCGATCGCCAAATTTACGGGCATTATCCAAATACGACACATGACCGGGATGCAAAATATCAAAACAACCGTTAGTCATGACGATTTTTTCACCACGATCTTTCGCCAGTTTAACGGCCTCTTTCAGTTCCGCTTCGGTCATTACGCCAAAGCCGGTGCCGGTTCTGCCATGAATGGCATTTTCCAGTTCCACGGTTGAAACCGTTGACGTGCCCAATTTGCCCACGACGATACCGGCGGCGAC  >  1/354943‑355435

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑