| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 353,069 | G→A | A108A (GCG→GCA) | unknown → | Micrococcal nuclease (thermonuclease) homologs |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 353,069 | 0 | G | A | 100.0% | 270.8 / NA | 79 | A108A (GCG→GCA) | unknown | Micrococcal nuclease (thermonuclease) homologs |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (38/41); total (38/41) | |||||||||||
CCGTTCACGCCCACACGTTAGCCTGTCGCGTTGTCGGCATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCGCAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAACCGCACTTATGGCGTCAACAAAGAAGGTAAACCACATGAATTTTGATCCCGTGATATTTCGTCAATATTTTCCTTATCTCCATTCCGATGCTG > 1/352822‑353309 | ccGTTCACGCCCACACGTTAGCCTGTCGCGTTGTCGGCATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACaa > 1:204499/1‑251 (MQ=255)ccGTTCACGCCCACACGTTAGCCTGTCGCGTTGTCGGCATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACaa > 1:831200/1‑251 (MQ=255) cGTTCACGCCCACACGTTAGCCTGTCGCGTTGTCGGCATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCGAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAg < 1:732746/251‑1 (MQ=255) cGTTCACGCCCACACGTTAGCCTGTCGCGTTGTCGGCATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAg < 1:113613/251‑1 (MQ=255) gTTCACGCCCACACGTTAGCCTGTCGCGTTGTCGGCATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAgg > 1:863101/1‑251 (MQ=255) gTTCACGCCCACACGTTAGCCTGTCGCGTTGTCGGCATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAgg > 1:667608/1‑251 (MQ=255) cacGTTAGCCTGTCGCGTTGTCGGCATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGtta > 1:501511/1‑251 (MQ=255) ttAGCCTGTCGCGTTGTCGGCATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGttaatt < 1:202215/250‑1 (MQ=255) gCCTGTCGCGTTGTCGGCATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGttaatttaat > 1:809468/1‑251 (MQ=255) ccTGTCGCGTTGTCGGCATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATc < 1:308517/251‑1 (MQ=255) gTCGCGTTGTCGGCATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAggg > 1:333578/1‑230 (MQ=255) gTCGGCATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACa > 1:187757/1‑251 (MQ=255) ggCATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAggg > 1:803329/1‑251 (MQ=255) gCATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAggg > 1:764796/1‑250 (MQ=255) cATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGc < 1:757273/250‑1 (MQ=255) cAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATgg > 1:129417/1‑251 (MQ=255) gTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAAc < 1:166559/240‑1 (MQ=255) gTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCg > 1:817063/1‑251 (MQ=255) gTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGc < 1:800529/250‑1 (MQ=255) tGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGcc < 1:833474/250‑1 (MQ=255) cAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGttaattt > 1:42736/1‑216 (MQ=255) cAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAg < 1:480652/232‑1 (MQ=255) ttttACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAATCTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATaa < 1:739575/249‑1 (MQ=255) ttttACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAAc < 1:76220/251‑1 (MQ=255) ttttACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAAc < 1:831128/251‑1 (MQ=255) cTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAAc > 1:282719/1‑221 (MQ=255) gCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAatat < 1:787063/248‑1 (MQ=255) gCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGAt < 1:664936/248‑1 (MQ=255) gCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGAt < 1:558919/248‑1 (MQ=255) gCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGAt < 1:486894/248‑1 (MQ=255) gCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGAt < 1:549259/248‑1 (MQ=255) cAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATAATGCACAAGGGCAAAACGCTAATTTAATCATGGTCAAACAGGGCATGGCGTGGGCCTATAAACAATATGt > 1:437994/1‑240 (MQ=255) gaTCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGttaatt > 1:733975/2‑193 (MQ=255) aaTCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGt < 1:725525/251‑1 (MQ=255) aTCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGttaattt > 1:113501/1‑193 (MQ=255) aTCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGc < 1:696869/223‑1 (MQ=255) aTCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGtt > 1:28354/1‑251 (MQ=255) aTCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGtt > 1:560490/1‑251 (MQ=255) aCAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAAc < 1:223642/178‑1 (MQ=255) aaaTCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAat < 1:183819/225‑1 (MQ=255) tGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGaacaa < 1:458151/251‑1 (MQ=255) tGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGaac < 1:259321/249‑1 (MQ=255) aaaTTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCaaaaaaa > 1:384292/1‑251 (MQ=255) aaaTTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCaaaaaa < 1:475041/250‑1 (MQ=255) cgcCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTAt > 1:770370/1‑250 (MQ=255) caATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATaa < 1:360787/180‑1 (MQ=255) caATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATcg > 1:63370/1‑207 (MQ=255) caATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATcg > 1:737759/1‑207 (MQ=255) caATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATgg > 1:238141/1‑250 (MQ=255) caATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATgg > 1:143959/1‑250 (MQ=255) caATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATgg > 1:784832/1‑250 (MQ=255) caATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGc < 1:683901/251‑1 (MQ=255) aTTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTc < 1:238752/251‑1 (MQ=255) cGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTACCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATc < 1:443202/251‑1 (MQ=255) gCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATcc > 1:505860/1‑250 (MQ=255) aaGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCAt > 1:71811/1‑251 (MQ=255) cccGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTGAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAACCg < 1:429617/251‑1 (MQ=255) cGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGTGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGc < 1:423276/226‑1 (MQ=255) cGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAAACGCa > 1:725006/1‑251 (MQ=255) tCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTc < 1:724440/164‑1 (MQ=255) tGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAACCGCACTTATgg < 1:528998/251‑1 (MQ=255) tGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAACCGCACTTATgg < 1:846579/251‑1 (MQ=255) cgTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGa < 1:749593/217‑1 (MQ=255) tGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGc < 1:68904/207‑1 (MQ=255) tGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAACCGCACTTATGGCGTCAACAaaga < 1:246474/251‑1 (MQ=255) cGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATcg > 1:74540/1‑152 (MQ=255) gaTCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAACCGCACTTATGGCGTCAACAAAGAAGGTAAACCACATGaa > 1:163933/1‑251 (MQ=255) ggAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGc > 1:861160/1‑99 (MQ=255) gATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAACCGCACTTATGGCGTCAACAAAGAAGGTAAACCACATGAATTTTGATCCCGTGATATTTCGTCaa > 1:768855/1‑251 (MQ=255) tCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAACCGCACTTATGGCGTCAACAAAGAAGGTAAACCACATGAATTTTGATCCCGTGATATTTCGTCAata > 1:618180/1‑251 (MQ=255) cTATCATCGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAg < 1:170824/70‑1 (MQ=255) atcatcGCAAGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAACCGCACTTATGGCGTCAACAAAGAAGGTAAACCACATGAATTTTGATCCCGTGATATTTCGTCAATAtttt > 1:268658/1‑250 (MQ=255) aaGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAACCGCACTTATGGCGTCAACAAAGAAGGTAAACCACATGAATTTTGATCCCGTGATATTTCGTCAATATTTTCCTTAtctc < 1:806158/251‑1 (MQ=255) aaGTTAGCCATCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAACCGCACTTATGGCGTCAACAAAGAAGGTAAACCACATGAATTTTGATCCCGTGATATTTCGTCAATATTTTCCTTAtct > 1:108612/1‑250 (MQ=255) tCGCGTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGttt < 1:732236/93‑1 (MQ=255) cgcgTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAACCGCACTTATGGCGTCAACAAAGAAGGTAAACCACATGAATTTTGATCCCGTGATATTTCGTCAATATTTTCCTTATCTCCATTCCGa < 1:591061/248‑1 (MQ=255) cgTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAACCGCACTTATGGCGTCAACAaaga > 1:218609/1‑182 (MQ=255) cgTATGATGCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAACCGCACTTATGGCGTCAACAAAGAAGGTAAACCACATGAATTTTGATCCCGTGATATTTCGTCAATATTTTCCTTATCTCCATTCCGATGCtg < 1:171635/251‑1 (MQ=255) atgatgCACAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAACCGCACTTATGGCGTCAACAAAGAAGGTAAACCACATGAATTTTGATCCCGTGATATTTCGTCAATATTTTCCTTATCTCCATTc > 1:164104/1‑240 (MQ=255) | CCGTTCACGCCCACACGTTAGCCTGTCGCGTTGTCGGCATCAGTGATGGTGACAGTTTTACCTGCTTAACAGGCAATCATAAACAAATCAAAGTGCGTTTGGCGGAAATTGATGCGCCCGAACACAATCAGCCATTCGGCAAGAAATCCCGTCAAATGCTCGCGTCATTGATTCATCAACGTGAGATCAAACTGGAGATTTCCGGCGAGGATCGCTATCATCGCAAGTTAGCCATCGCGTATGATGCGCAAGGGCAAAACGTTAATTTAATCATGGTCCAACAGGGCATGGCGTGGGCCTATAAACAATATGTTCAGGATCCCGTTTATCGCGAAGCGGAACAACGGGCAAAAAAACGGCGTATCGGCTTATGGCAGGATCGTCATCCCATCGAACCGCACTTATGGCGTCAACAAAGAAGGTAAACCACATGAATTTTGATCCCGTGATATTTCGTCAATATTTTCCTTATCTCCATTCCGATGCTG > 1/352822‑353309 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |