Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,707,584	G→A	T23I (ACA→ATA)	unknown ←	probable exported protein STY4558

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,707,584	0	G	A	100.0%	162.9 / NA	49	T23I (ACA→ATA)	unknown	probable exported protein STY4558
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (25/24);  total (25/24)

TACGTTCGTTCTTGTTCCGTTTTGGCCTCAATGCCTAACGTCGTCAGCGGATCTAACCCGGGAGACCAGGTTCCCCGCTCCCCATTTTGTAATTGTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATGTTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTATTGGTGATATTTTCCGGAATGGATGTTCGTTGCTTGAAACAGACGGTTCGGGTGATGTCATTTAGTGTGATTTCATAAGCTGGTCCCGCGAGCATTTGTAATGCGTCACGT  >  1/1707338‑1707828                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                     taCGTTCGTTCTTGTTCCGTTTTGGCCTCAATGCCTAACGTCGTCAGCGGATCTAACCCGGGAGACCAGGTTCCCCGCTCCCCATTTTGTAATTTTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTg                                                                                                                                                                                                                                                  <  1:353716/251‑1 (MQ=255) taCGTTCGTTCTTGTTCCGTTTTGGCCTCAATGCCTAACGTCGTCAGCGGATCTAACCCGGGAGACCAGGTTCCCCGCTCCCCATTTTGTAATTGTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTg                                                                                                                                                                                                                                                  <  1:409854/251‑1 (MQ=255) taCGTTCGTTCTTGTTCCGTTTTGGCCTCAATGCCTAACGTCGTCAGCGGATCTAACCCGGGAGACCAGGTTCCCCGCTCCCCATTTTGTAATTGTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTg                                                                                                                                                                                                                                                  <  1:167535/251‑1 (MQ=255) taCGTTCGTTCTTGTTCCGTTTTGGCCTCAATGCCTAACGTCGTCAGCGGATCTAACCCGGGAGACCAGGTTCCCCGCTCCCCATTTTGTAATTGTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTg                                                                                                                                                                                                                                                  <  1:353702/251‑1 (MQ=255)         ttcTTGTTCCGTTTTGGCCTCAATGCCTAACGTCGTCAGCGGATCTAACCCGGGAGACCAGGTTCCCCGCTCCCCATTTTGTAATTGTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGaa                                                                                                                                                                                                                                          >  1:485497/1‑251 (MQ=255)         ttcTTGTTCCGTTTTGGCCTCAATGCCTAACGTCGTCAGCGGATCTAACCCGGGAGACCAGGTTCCCCGCTCCCCATTTTGTAATTGTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGaa                                                                                                                                                                                                                                          >  1:584520/1‑251 (MQ=255)         ttcTTGTTCCGTTTTGGCCTCAATGCCTAACGTCGTCAGCGGATCTAACCCGGGAGACCAGGTTCCCCGCTCCCCATTTTGTAATTGTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGaa                                                                                                                                                                                                                                          >  1:657912/1‑251 (MQ=255)                          ccTCAATGCCTAACGTCGTCAGCGGATCTAACCCGGGAGACCAGGTTCCCCGCTCCCCATTTTGTAATTGTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGAc                                                                                                                                                                                                                         <  1:604355/251‑1 (MQ=255)                                 gCCTAACGTCGTCAGCGGATCTAACCCGGGAGACCAGGTTCCCCGCTCCCCATTTTGTAATTGTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTgc                                                                                                                                                                                                                                                 >  1:256489/1‑220 (MQ=255)                                                  gATCTAACCCGGGAGACCAGGTTCCCCGCTCCCCATTTTGTAATTGTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCagt                                                                                                                                                                                                                <  1:664740/236‑1 (MQ=255)                                                                gaCCAGGTTCCCCGCTCCCCATTTTGTAATTGTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAgaga                                                                                                                                                                                                                          <  1:98948/212‑1 (MQ=255)                                                                           ccGCTCCCCATTTTGTAATTGTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGAc                                                                                                                                                                                                                         >  1:356444/1‑202 (MQ=255)                                                                           ccGCTCCCCATTTTGTAATTGTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTActcctc                                                                                                                                                                        <  1:87801/251‑1 (MQ=255)                                                                                ccccATTTTGTAATTGTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCaataa                                                                                                                                                                   <  1:699493/251‑1 (MQ=255)                                                                                   cATTTTGTAATTGTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAAttt                                                                                                                                                                <  1:867875/251‑1 (MQ=255)                                                                                               gTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAg                                                                                                                                                    >  1:565638/1‑251 (MQ=255)                                                                                               gTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAg                                                                                                                                                    >  1:669735/1‑251 (MQ=255)                                                                                                  cATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGAc                                                                                                                                                                                                                         <  1:560363/179‑1 (MQ=255)                                                                                                    tatTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTAc                                                                                                                                                                                                           <  1:367828/191‑1 (MQ=255)                                                                                                         gTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAAACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTcgtcgt                                                                                                                                          >  1:456392/1‑251 (MQ=255)                                                                                                               ctctTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCAt                                                                                                                                    >  1:232219/1‑251 (MQ=255)                                                                                                               ctctTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCAt                                                                                                                                    >  1:5695/1‑251 (MQ=255)                                                                                                                 ctTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCAtc                                                                                                                                   >  1:320595/1‑250 (MQ=255)                                                                                                                             gTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCgg                                                                                                                                                             <  1:799315/212‑1 (MQ=255)                                                                                                                              tCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGAtgttt                                                                                                                     >  1:747922/1‑251 (MQ=255)                                                                                                                                    ttCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGcc                                                                                                                                                                                                                                    <  1:11392/134‑1 (MQ=255)                                                                                                                                    ttCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTAtt                                                                                                               >  1:48503/1‑251 (MQ=255)                                                                                                                                                  gCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTG‑AATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCagt                                                                                                                                                                                                                >  1:3308/1‑139 (MQ=255)                                                                                                                                                         ctctTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGAc                                                                                                                                                                                                                         >  1:784553/1‑124 (MQ=255)                                                                                                                                                           ctTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAAc                                                                                                                                                                                            >  1:664071/1‑151 (MQ=255)                                                                                                                                                              gttgATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTc                                                                                                                                                                                                                   >  1:260589/1‑125 (MQ=255)                                                                                                                                                                                      tatTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTATTGGTGATATTTTCCGGAATGGATGTTCGTTGCTTGAAACAGACGGTTCggg                                                             <  1:493111/251‑1 (MQ=255)                                                                                                                                                                                      tatTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTATTGGTGATATTTTCCGGAATGGATGTTCGTTGCTTGAAACAGACGGTTCggg                                                             <  1:594512/251‑1 (MQ=255)                                                                                                                                                                                       atTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACTATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTATTGGTGATATTTTCCGGAATGGATGTTCGTTGCTTGAAACAGACGGTTCggg                                                             >  1:126777/1‑250 (MQ=255)                                                                                                                                                                                       atTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTATTGGTGATAtt                                                                                                      <  1:689636/209‑1 (MQ=255)                                                                                                                                                                                                 tGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTATTgg                                                                                                             <  1:612149/192‑1 (MQ=255)                                                                                                                                                                                                 tGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTATTGGTGATATTTTCCGGAATGGATGTTCGTTGCTTGAAACAGACGGTTCGGGTGATGTCAttt                                                  <  1:686072/251‑1 (MQ=255)                                                                                                                                                                                                   cacaGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTATTGGTGATATTTTCCGGAATGGATGTTCGTTGCTTGAAACAGACGGTTCGGGTGATGTCATTTAg                                                <  1:703844/251‑1 (MQ=255)                                                                                                                                                                                                     caGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTa                                                                                                                                                     >  1:266771/1‑148 (MQ=255)                                                                                                                                                                                                       gCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAAc                                                                                                                                                                                                                                         >  1:119182/1‑62 (MQ=255)                                                                                                                                                                                                        cTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTATTGGTGATATTTTCCGGAATGGATGTTCGTTGCTTGAAACAGACGGTTCGGGTGATGTCATTTAgtg                                              <  1:408874/248‑1 (MQ=255)                                                                                                                                                                                                               gTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCaat                                                                                                                                                                     <  1:500489/122‑1 (MQ=255)                                                                                                                                                                                                               gTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTATTGGTGATATTTTCCGGAATGGATGTTCGTTGCTTGAAACAGACGGTTCGGGTGATGTCATTTAGTGTGATTTCATa                                    >  1:865800/1‑251 (MQ=255)                                                                                                                                                                                                                  tAAGTTCGTTGCAATCGTTTAAATATTGGATTTTGATATTTGCGCATGAACAAACCCCCTCAGAGACATTGTTAGTAGTTTTATGCTTGAATAAACAAATTTCATTATTTCTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCTATCGGATGTTTGTTATTGGTGATATTTTCCGGAATGGATGTTCGTTGGTTGAAACAGTCGGTTCGGTTGATGTCATTTAGTGTGATTTCATAAGc                                 <  1:212921/251‑1 (MQ=255)                                                                                                                                                                                                                                 cGTTGAAATATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTATTGGTGATATTTTCCGGAATGGATGTTCGTTGCTTGAAACAGACGGTTCGGGTGATGTCATTTAGTGTGATTTCATAAGCTGGTCCCGCGAGCAt                  >  1:874730/1‑251 (MQ=255)                                                                                                                                                                                                                                       aaTATCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTATTGGTGATATTTTCCGGAATGGATGTTCGTTGCTTGAAACAGACGGTTCGGGTGATGTCATTTAGTGTGATTTCATAAGCTGGTCCCGCGAGCATTTGTaa            <  1:692659/251‑1 (MQ=255)                                                                                                                                                                                                                                        atatCGGACTGTGATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTATTgg                                                                                                             >  1:315589/1‑153 (MQ=255)                                                                                                                                                                                                                                                 tgtgATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTATTGGTGATATTTTCCGGAATGGATGTTCGTTGCTTGAAACAGACGGTTCGGGTGATGTCATTTAGTGTGATTTCATAAGCTGGTCCCGCGAGCATTTGTAATGCGTCACGt  >  1:249475/1‑251 (MQ=255)                                                                                                                                                                                                                                                  gtgATATTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTATTGGTGATATTTTCCGGAATGGATGTTCGTTGCTTGAAACAGACGGTTCGGGTg                                                           >  1:168544/1‑193 (MQ=255)                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                     TACGTTCGTTCTTGTTCCGTTTTGGCCTCAATGCCTAACGTCGTCAGCGGATCTAACCCGGGAGACCAGGTTCCCCGCTCCCCATTTTGTAATTGTTCATATTTGTTCCACTCTTCAACGGTAAGTCCCCATTCCTGGGCTTTGAGCTCTAACTCTTGTTGATTAAGTTGTCCGGTCACAATATTTTTGTGTTGCACAGCTTGATTGTTTAAGTTCGTTGCAATCGTTGAAATATCGGACTGTGATGTTTGCGCATGAACAAGCCCACTCAGAGACATTGTCAGTAGTACCATGCCGGAATAAACAAATTTCATGATTACTCCTCAATAATTTCGGTTGTTGTAGTTGTCGTCGTTTTCATCTCAATCGGATGTTTGTTATTGGTGATATTTTCCGGAATGGATGTTCGTTGCTTGAAACAGACGGTTCGGGTGATGTCATTTAGTGTGATTTCATAAGCTGGTCCCGCGAGCATTTGTAATGCGTCACGT  >  1/1707338‑1707828

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑