| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,153,783 | C→T | G303D (GGT→GAT) | unknown ← | PTS system, mannose‑specific IIA component (EC 2.7.1.191) / PTS system, mannose‑specific IIB component (EC 2.7.1.191) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,153,783 | 0 | C | T | 97.8% | 288.8 / ‑5.7 | 92 | G303D (GGT→GAT) | unknown | PTS system, mannose‑specific IIA component (EC 2.7.1.191) / PTS system, mannose‑specific IIB component (EC 2.7.1.191) |
| Reads supporting (aligned to +/- strand): ref base C (2/0); new base T (35/55); total (37/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
TTGAATATCGCCCAACACTAAGCCGATTAAGGTACAGGCAATTAACGGGCGTTGGGTTTGCCATTCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑CCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTAAACCCGCACCATTTTATCCACGTTTACCACGTGGGCGGTGACCCCGGGC > 1/1153540‑1154028 | ttGAATATCGCCCAACACTAAGCCGATTAAGGTACAGGCAATTAACGGGCGTTGGGTTTGCCATTCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGc < 1:248635/251‑1 (MQ=255) atatCGCCCAACACTAAGCCGATTAAGGTACAGGCAATTAACGGGCGTTGGGTTTGCCATTCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTg < 1:332104/251‑1 (MQ=255) atCGCCCAACACTAAGCCGATTAAGGTACAGGCAATTAACGGGCGTTGGGTTTGCCATTCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGaa < 1:304951/251‑1 (MQ=255) acacTAAGCCGATTAAGGTACAGGCAATTAACGGGCGTTGGGTTTGCCATTCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTTAAACTTTTTGCACGTCCCACTCAATG‑CCTTTTGCA‑TCAAGGGCTTTTAAGGCGGCaa > 1:137512/1‑251 (MQ=255) tAAGCCGATTAAGGTACAGGCAATTAACGGGCGTTGGGTTTGCCATTCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑Tc < 1:23702/251‑1 (MQ=255) tAAGCCGATTAAGGTACAGGCAATTAACGGGCGTTGGGTTTGCCATTCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑Tc < 1:232113/251‑1 (MQ=255) gATTAAGGTACAGGCAATTAACGGGCGTTGGGTTTGCCATTCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTTATTTTGAAA‑TTTACGCACGACCCGCTCAATG‑CCTTTGGCA‑TCAAGGGGCTTGGAggcgggcaaatctttttt > 1:230318/1‑238 (MQ=255) aTTAAGGTACAGGCAATTAACGGGCGTTGGGTTTGCCATTCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTTAAACTTTTCGCACGTCCCGCTCAATG‑CCCTTTGCA‑TCAAGGGGTTTGAAGGGGGCCATA‑TCttttttg > 1:756726/1‑247 (MQ=255) aGGTACAGGCAATTAACGGGCGTTGGGTTTGCCATTCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGaa < 1:497951/228‑1 (MQ=255) ggCAATTAACGGGCGTTGGGTTTGCCATTCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGAt < 1:212798/249‑1 (MQ=255) gCAATTAACGGGCGTTGGGTTTGCCA‑TCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGAt < 1:538085/247‑1 (MQ=255) aaTTAACGGGCGTTGGGTTTGCCATTCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTTA‑TTTTAAACTTTTCGCACGTCCAGCTCAATG‑CCTTTTGCA‑TCAAAGGGTTTTAAGGCGGCAATA‑TCTTTTTCGTCCCCGGGTACCg > 1:679696/1‑250 (MQ=255) aTTAACGGGCGTTGGGTTTGCCATTCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTTTCA‑TTTTAAAATTTTTGCACGTCCAGCTCAATG‑CCTTTTGCA‑TCAAGGGGTTTGAAGGCGGCAATA‑TCTTTTTCGTCCACGGATACCGc > 1:460264/1‑250 (MQ=255) ccATTCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTAc < 1:804264/250‑1 (MQ=255) ccATTCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGACGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTAcc < 1:86358/251‑1 (MQ=255) gTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAg < 1:285937/192‑1 (MQ=255) aaTCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTTTAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTTTCGTCCACGGATACCGC‑CTTGGGAATCATTTTTTTTCCATCGCGATACg > 1:165845/1‑250 (MQ=255) aaTCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATAc < 1:238765/249‑1 (MQ=255) aaTCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGc < 1:418606/251‑1 (MQ=255) aTCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGcc < 1:408367/251‑1 (MQ=255) tGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGccacc < 1:853374/251‑1 (MQ=255) cgccgcAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGccgccc < 1:282460/250‑1 (MQ=255) cgccgcAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGccaccc < 1:775534/250‑1 (MQ=255) ccgcAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTTTCA‑TTTTAAAATTTACGCACGTCCAGCTCAATT‑CCCTTTGCA‑TCAAGGGGTTTTTAGGCGGCAATATTCTTT‑TCGTCCCCGGATACCGC‑CCTGGTAATCATTTTTTTTCCATCCCGATACGCCCTGccaccccc > 1:261036/1‑248 (MQ=255) gcAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTTAAAATTTTCGCACGTCCAGCTCAATG‑CCTTTTGCA‑TCAAGGGGTTTTAAGGCGGCAATA‑TCTTTTTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTTCCATCGCGATACGCCATGCCACCCACAtt > 1:345534/1‑251 (MQ=255) cAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACAtt < 1:541441/250‑1 (MQ=255) aaaTACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTTAAACTTTTCGCACGTCCCGCTCAAAG‑CCTTTTGCA‑TCAAGGGCTTTTAAGGCGGCAATA‑TCTTTGTTGTCCCCGGATACCGC‑CTTTGTAATCATTTTTTTTTCATCTCGATACGCCATGccaccccccttgt > 1:294165/1‑244 (MQ=255) aaaTACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTTAAAATTTACGCACGTCCAGCTCAATT‑CCTTTTGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTTTCGTCCACGGATACCGC‑CTTGGTAATCATTTTTTTACCATCGCGATaa > 1:340906/1‑231 (MQ=255) aaTACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTTTAACTTTACTCACGCCCAGCTCAATGTCCTTT‑GCG‑TCAAGGGCTTTTGAGGCGGGAATA‑TCTTTTTCGTCCACGGATAACGC‑ATTGGGTATTATTTTTTTTACATCGCGATACGCCATGCCACCCACATTGAt > 1:728750/1‑251 (MQ=255) aTACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTTTAACTTTTTGCACGTCCAGCTCCAAG‑CCCTTTGCA‑TCAAGGGGGTTTTAGGCGGCAATA‑ACTTTGTCGGCCACGGGTACCCC‑ATTGGGAAACCTTTTTTTACCCTCGCGCTACGCCATGCCACCCCCATTGAT‑g > 1:632949/1‑251 (MQ=255) tACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑gg < 1:829877/251‑1 (MQ=255) aCCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTaaaa < 1:529018/251‑1 (MQ=255) aaaCACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATc < 1:497265/248‑1 (MQ=255) cacCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGATGTTA‑TTTGATATTTTTATCACGGCATTCTCTATT‑CCATTGGGA‑TCAAAGGGTTTGTAGGGGGCGATA‑ACTTTGTCTTTCCCGGGTAGCGC‑GTTGGGAATCATTTTTTTTTCATCGCGATACTCCAAGCCACCCCCATTGAT‑GGATTTtaaaaaaacgc > 1:737345/1‑243 (MQ=255) aatTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑ACTTTGGCA‑TCCAGGGGTTTGAAGGCGGGAATA‑TCTTTTTCGTCCACCGGTACCGCAATTGG‑AATCATTTTTTTTTCATCCCGATAAGCCCTGCCACCCCCATTGAT‑GGAtttgtctcttttacaaatttccc > 1:623937/1‑230 (MQ=255) tttGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGaaa < 1:544950/251‑1 (MQ=255) gTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTTAAAATTTTAGCACGTCCCGCTCAATT‑CCTTTTGCC‑TCAAGGGCTTTTAAAGCGGCAATA‑TCTTTTTCGTCCACGGGTACCGC‑ATTGGTAATCATTTTTTTTTCATCGCGATACGCCCTGCCCCCCACATTTAT‑GGGTTTTAAAACAAAACCCCCCTCGGGAAGACG‑Caaa > 1:602715/1‑250 (MQ=255) gTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTTAAAATTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCGTTGAAGGCGGCAATA‑TCTTTTTCGTCCACGGATACCGC‑ATTGGGAATCATTTTTTTACCATCCCGGTACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCCCATCGGGAAGACG‑Caaa > 1:552524/1‑250 (MQ=255) aaTTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATAcgtc < 1:228840/251‑1 (MQ=255) tCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATc < 1:548555/217‑1 (MQ=255) aTTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGcc < 1:372669/179‑1 (MQ=255) aTTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTa < 1:360453/251‑1 (MQ=255) ccTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTTAAACTTTTCGCACGTCCAGCTCAAAG‑CCTTTTGGA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTTTCGTCCCCCGATACCGC‑CTTGGGAATCATTTTTTTTCCATCGCGATACGCCATGCCACCCACATTTAT‑GGGTTTTAAAAAAACGCCCCCATCGGGAAAACG‑CCAAAAGTCCGTCGGGTTGGGaaaaa > 1:788799/1‑249 (MQ=255) ccTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTTAAAATTTTCGCACGTCCAGCTCCATG‑CCTTTTGCA‑TCAAGGGCTTTTAAGGCGGCAATA‑TCTTTTTTGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTTCCATCGCGATACGCCCTGCCACCCACATTGAT‑GGATTTTAAAAAAACGCCCCCATCGGGAAGACG‑CAAAACGCCCGTCGGATTGGTAAACa > 1:192872/1‑251 (MQ=255) ccTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCAt < 1:109522/215‑1 (MQ=255) aaaGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTTA‑TTTTAAACTTTTCGCACGGCCCGCTCAATG‑CCTTTGGCC‑TCAAGGGGTTTTAAGGCGGCAATA‑TCTTTTTCGTCCCCGGATAACGC‑CTTGGGAATCATTTTTTTTTCATCGCGATACGCCATGCCACCCACATTGAT‑GGGTTTTAAATCAAAGCCCGCATCGGGAAAACG‑CAAAACATCCGTCGGGTTGGTaaaaaacaaa > 1:825060/1‑244 (MQ=255) gtaagtTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTTA‑GTTGAAACTTTTTGTACGTCCCGCTCAATG‑CCTTTTGCATCAAAGGGTTTTGAA‑GCGGTAAAA‑TCTTTTTCTTTCACGGATAACGC‑CTTTGTAATTATTTTTTTATCACCGCGATAAGCCATTCCACCCACAATTATAGAATTAAAAATAAAC‑CCCGCATCGGAAAGACG‑CCAAACGTCCCCCGGATTTGTaaaaaacaaaat > 1:603629/1‑241 (MQ=255) taagtTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAAcat < 1:636329/249‑1 (MQ=255) taagtTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAAcat < 1:659446/249‑1 (MQ=255) gtTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTTAAACTTTACGCCCGTCCCGCTCAATG‑CCTTTTGCA‑TCAAGGGCTTTTAAGGGGGGAATA‑TCTTTTTCGTCCCCGGATAACGC‑CTTGGGAATCATTTTTTTTCCATCGCGATACGCCATGCCACCCACATTGAT‑GGGTTTTAAATCAACGCCCGCATCGGGAAGACG‑CAATACGTCCGGCGGGTTGGGAAAAAGCAACAACATg > 1:224372/1‑250 (MQ=255) ttATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAAcat < 1:731248/245‑1 (MQ=255) tttttCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCCCGTCCAGCTCAATG‑CCTTTTGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGGAATCATTTTTTTTCCATCGCGATACGCCATGCCACCCACATTGAT‑GGGTTTTAAATTAAAGCCCGCATCGGaaa > 1:68367/1‑205 (MQ=255) cAATAAATCCATCATGTACTGGCGGTTTTCC‑TTTTAAAATTTACGCACGCCCCGCTCAAAG‑CCTTTTGCC‑TCAAGGGCTTTGAAGGCGGCAATA‑Tc > 1:461293/1‑96 (MQ=255) cAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTTAAAATTTTCGCCCCTCCAGCTCAATG‑CCTTTTGCATCAAAGGGCTTT‑AAGGCGGCAATA‑TCTTTTTCGTCCCCCGGTACCGC‑ATTGGTAATCATTTTTTTTCCATCGCGATACGCCATGCCACCCCCATTGAT‑GGATTTTAAAACAACACCCCCCTCGGAAAGACGCCAAAAC‑TCCCTCGGATTGGTAAAAAGCAAAATCACGCGTTCGCCCGCa > 1:695581/1‑250 (MQ=255) cAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑gg < 1:185285/170‑1 (MQ=255) aaaTCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTc < 1:540937/251‑1 (MQ=255) ccATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAGTACGTCCGTCGGATTGGTAAACAGCAACATCATGc < 1:840060/231‑1 (MQ=255) catcatGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGgt < 1:597884/251‑1 (MQ=255) atcatGTACTGGCGGTTGTCA‑TTTTAAACTTTACGCACGTCCAGCTCAATG‑CCTTTTGCA‑TCAAAGGCTTTGAAGGCGGCAAAA‑TCTTTTTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTTCCATCGCGATACGCCCTGCCCCCCACATTGAT‑GGATTTTAAATCAACGCCCGCATCGGAAAGACG‑CAATAc > 1:463868/1‑197 (MQ=255) atcatGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑a < 1:26791/108‑1 (MQ=255) atcatGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGc < 1:565466/229‑1 (MQ=255) atcatGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCg < 1:90509/230‑1 (MQ=255) catGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTGGGCA‑TCAAGGGCTTTGa < 1:531637/71‑1 (MQ=255) atGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTAcc < 1:882618/125‑1 (MQ=255) atGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCCCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTgg < 1:868574/109‑1 (MQ=255) tGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGttgttg < 1:709795/251‑1 (MQ=255) tACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACAtt < 1:814359/149‑1 (MQ=255) tACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTa < 1:741454/251‑1 (MQ=255) tGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTAAAc < 1:708124/251‑1 (MQ=255) gCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTAAAcc < 1:683428/250‑1 (MQ=255) gCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTAAAcc < 1:24760/250‑1 (MQ=255) tCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTAAACCCGCACCa < 1:539568/250‑1 (MQ=255) a‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTAAACCCGCACCAttt > 1:463928/1‑251 (MQ=255) tttGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTaa < 1:164020/193‑1 (MQ=255) cTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTc > 1:271691/1‑217 (MQ=255) cTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAggg > 1:528091/1‑221 (MQ=255) cTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGttgttg > 1:701049/1‑227 (MQ=255) cTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTAAACCCGCACCATTTTATCCACg > 1:613211/1‑251 (MQ=255) cTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACATCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTAAACCCGCACCATTTTATCCa > 1:445407/1‑249 (MQ=255) tttACGCACGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTAAACCCGCACCATTTTATCCACGt > 1:242827/1‑251 (MQ=255) aCGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTAAACCCGCACCATTTTATCCACGTTTACCAc < 1:518687/251‑1 (MQ=255) cGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGgt > 1:231851/1‑213 (MQ=255) cGTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCAGCATATTCAGGGTTGTTGTAAACCCGCACCATTTTATCCACGTTTACCACg > 1:607481/1‑251 (MQ=255) gTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTc > 1:94854/1‑207 (MQ=255) gTCCAGCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTAAACCCGCACCATTTTATCCa < 1:697434/239‑1 (MQ=255) gCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGc < 1:784025/102‑1 (MQ=255) gCTCAATG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTc < 1:565902/202‑1 (MQ=255) aTG‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTAAACCCGCACCATTTTATCCACGTTTACCACGTGGGCGGTGAc < 1:113225/251‑1 (MQ=255) g‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑gg < 1:860824/110‑1 (MQ=255) g‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTAAACCCGCACCATTTTATCCACGTTTACCACGTGGGCGGTGAcc > 1:103847/1‑250 (MQ=255) g‑CCTTTGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTAAACCCGCACCATTTTATCCACGTTTACCACGTGGGCGGTGAcc > 1:211301/1‑250 (MQ=255) tGGCA‑TCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTAAACCCGCACCATTTTATCCACGTTTACCACGTGGGCGGTGACCCCGGGc < 1:721175/251‑1 (MQ=255) | TTGAATATCGCCCAACACTAAGCCGATTAAGGTACAGGCAATTAACGGGCGTTGGGTTTGCCATTCGTCAAGAATCGATCCTGCGCCGCAAATACAGGCGACCAGAAACACCAGAATAATTTGTAAAGTGGTAATTTCCATAATCATTTCCTTTAAAGTAAGTTATTTTTCTTCAATAAATCCATCATGTACTGGCGGTTGTCA‑TTTGAAACTTTACGCACGTCCAGCTCAATG‑CCTTTGGCA‑CCAAGGGCTTTGAAGGCGGCAATA‑TCTTTGTCGTCCACGGATACCGC‑ATTGGTAATCATTTTTTTACCATCGCGATACGCCATGCCACCCACATTGAT‑GGATTTAAAATCAACGCCCGCATCGGAAAGACG‑CAATACGTCCGTCGGATTGGTAAACAGCAACATCATGCGTTCGCCGGCATATTCAGGGTTGTTGTAAACCCGCACCATTTTATCCACGTTTACCACGTGGGCGGTGACCCCGGGC > 1/1153540‑1154028 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |