| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 622,659 | C→A | R317S (CGT→AGT) | unknown → | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase (EC 6.3.2.‑) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 622,659 | 0 | C | A | 100.0% | 229.4 / NA | 66 | R317S (CGT→AGT) | unknown | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase (EC 6.3.2.‑) |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (38/28); total (38/28) | |||||||||||
CGGAATGTCAGTACGTAGGCAAAGATCAGGAATGGTATGCCGAACGCATTAAACATGATTGTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCCGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCACCAGCGTTAAAGCTGGCCGATGCGGTATTTCTATTCCAACCGGAAACTATTCTATGGAA > 1/622426‑622903 | cGGAATGTCAGTACGTAGGCAAAGATCAGGAATGGTATGCCGAACGCATTAAACATGATTGTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGc < 1:308957/251‑1 (MQ=255) aCGTAGGCAAAGATCAGGAATGGTATGCCGAACGCATAAAACATGATTGTACGGAGTTTGCAGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGc < 1:769256/251‑1 (MQ=255) ggCAAAGATCAGGAGTGGTATGCCGAACGCATTAAACATGATTGTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCa > 1:549253/1‑250 (MQ=255) ggCAAAGATCAGGAATGGTATGCCGAACGCATTAAACATGATTGTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATg > 1:656802/1‑238 (MQ=255) ggCAAAGATCAGGAATGGTATGCCGAACGCATTAAACATGATTGTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCa > 1:774651/1‑250 (MQ=255) gATCAGGAATGGTATGCCGAACGCATTAAACATGATTGTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGttt > 1:269078/1‑215 (MQ=255) tCAGGAATGGTATGCCGAACGCATTAAACATGATTGTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTatg < 1:167725/251‑1 (MQ=255) tCAGGAATGGTATGCCGAACGCATTAAACATGATTGTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTatg < 1:371984/251‑1 (MQ=255) aTGGTATGCCGAACGCATTAAACATGATTGTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCg > 1:137567/1‑239 (MQ=255) aTGGTATGCCGAACGCATTAAACATGATTGTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGAtt > 1:337738/1‑251 (MQ=255) ggTATGCCGAACGCATTAAACATGATTGTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGGGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGAttt > 1:496313/1‑250 (MQ=255) aaCGCATTAAACATGATTGTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCAc < 1:268370/251‑1 (MQ=255) aaaCATGATTGTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAGTCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGa > 1:464788/1‑251 (MQ=255) aTTGTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAg > 1:493007/1‑251 (MQ=255) aTTGTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAg > 1:467253/1‑251 (MQ=255) gTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCa > 1:639690/1‑251 (MQ=255) gTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCa > 1:458750/1‑251 (MQ=255) gAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACAtt > 1:131986/1‑251 (MQ=255) gAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACAtt > 1:599354/1‑251 (MQ=255) cGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCAc < 1:417038/251‑1 (MQ=255) ccATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGa < 1:503454/162‑1 (MQ=255) ggTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGt > 1:297573/1‑251 (MQ=255) ggTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGt > 1:869855/1‑251 (MQ=255) gTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTAt > 1:27399/1‑251 (MQ=255) gCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTAtt > 1:701073/1‑250 (MQ=255) cATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTc < 1:493516/250‑1 (MQ=255) ttGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCaa > 1:175491/1‑144 (MQ=255) aaTATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCgg < 1:744984/250‑1 (MQ=255) tatCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGgtgt > 1:417774/1‑251 (MQ=255) atCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCgg > 1:873096/1‑247 (MQ=255) tAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGtt < 1:356555/247‑1 (MQ=255) tAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATG‑TGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGc < 1:782250/251‑1 (MQ=255) ggTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCCCCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGc > 1:435626/1‑250 (MQ=255) ggTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCAc > 1:487051/1‑171 (MQ=255) caATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTatga > 1:110114/1‑147 (MQ=255) caATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTatga < 1:154205/147‑1 (MQ=255) caATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCa > 1:65935/1‑251 (MQ=255) caATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCa > 1:28304/1‑251 (MQ=255) caATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTG‑‑‑GTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATg > 1:119785/1‑215 (MQ=255) atatGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAac < 1:418853/251‑1 (MQ=255) atGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAacac < 1:485860/251‑1 (MQ=255) atGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAacac < 1:342438/251‑1 (MQ=255) gTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAacac > 1:292625/1‑241 (MQ=255) cAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAacac > 1:618715/1‑232 (MQ=255) cGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGa < 1:85111/250‑1 (MQ=255) cATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCAcc < 1:681191/251‑1 (MQ=255) ggTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATAc > 1:593216/1‑130 (MQ=255) gtgAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGaaaa > 1:803898/1‑214 (MQ=255) aGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCACCAGCGTTAAAGc < 1:498637/250‑1 (MQ=255) aGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCACCAGCGTTAAAGc < 1:377771/250‑1 (MQ=255) gAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTatgat > 1:128005/1‑90 (MQ=255) gAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCACCAGCGTTAAAGCTGGCCGa > 1:882278/1‑251 (MQ=255) tGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGa > 1:636959/1‑216 (MQ=255) aCGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGc < 1:583866/169‑1 (MQ=255) aCGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCACCAGCGTTAAAGCTGGCCGATGCGGTATTTCTAtt > 1:233554/1‑251 (MQ=255) aCGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCACCAGCGTTAAAGCTGGCCGATGCGGTATTTCTAtt > 1:746098/1‑251 (MQ=255) cGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCGCCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCACCAGCGTTAAAGCTGGCCGATGCGGTATTTCTATTc < 1:250385/251‑1 (MQ=255) cGTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCACCAGCGTTAAAGCTGGCCGATGCGGTATTTCTATTc < 1:191802/251‑1 (MQ=255) gTTAGGATCCTTTATTAATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCACCAGCGTTAAAGCTGGCCGATGCGGTATTTCTATTc > 1:307086/1‑250 (MQ=255) ttattaATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCAc < 1:182371/108‑1 (MQ=255) ttattaATGCGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCACCAGCGTTAAAGCTGGCCGATGCGGTATTTCTATTCCAACCGGaaa > 1:36053/1‑249 (MQ=255) cGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCACCAGCGTTAAAGCTGGCCGATGCGGTATTTCTATTCCAACCGGAAACTATTCTATgg < 1:301836/251‑1 (MQ=255) cGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCACCAGCGTTAAAGCTGGCCGATGCGGTATTTCTATTCCAACCGGAAACTATTCTATgg < 1:615158/251‑1 (MQ=255) cGAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCACCAGCGTTAAAGCTGGCCGATGCGGTATTTCTATTCCAACCGGAAACTATTCTATg < 1:332496/250‑1 (MQ=255) gAAACGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCACCAGCGTTAAAGCTGGCCGATGCGGTATTTc < 1:840022/224‑1 (MQ=255) aaaCGCAGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCACCAGCGTTAAAGCTGGCCGATGCGGTATTTCTATTCCAACCGGAAACTATTCTATGGaa < 1:697670/251‑1 (MQ=255) | CGGAATGTCAGTACGTAGGCAAAGATCAGGAATGGTATGCCGAACGCATTAAACATGATTGTACGGAGTTTGCCGTTTACCATAAAGGTGAAAAAATCACGGAAGTGCATTGGAATATCGTAGGTGAACACAATATGCGTAACGGTTTGATGGCAATTGCGGCAGCGAATCATGCCGGTGTGAGCATTGAAAATGCCTGCGCGACGTTAGGATCCTTTATTAATGCGAAACGCCGTTTGGAAGTGAAAGGCAATGTTCATGGCATCACCGTTTATGATGATTTCGCCCATCACCCCACCGAAATACAGGCAACATTGACCGCACTTCGCGATAAAGTCGGGCAAAATGCGCGTATTCTGGCGGTGTTAGAGCCGCGTTCCAACACCATGAAAATGGGGGTACATAAAGATGAAATCGCACCAGCGTTAAAGCTGGCCGATGCGGTATTTCTATTCCAACCGGAAACTATTCTATGGAA > 1/622426‑622903 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |