| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 618,427 | A→G | intergenic (+59/+6) | unknown → / ← unknown | type IV secretion system protein VirB10/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 618,427 | 0 | A | G | 100.0% | 308.1 / NA | 87 | intergenic (+59/+6) | unknown/unknown | type IV secretion system protein VirB10/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (51/36); total (51/36) | |||||||||||
GGCGGGAGTGATCCACTTATGGATACACCTGCGTTTACCCCGACCGCTGCAAGAAAGAACCAATTTAACCCGAATTTATTATTAGAACAAGGTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTACAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATGGTGCTTTGAAATATCCTGTTCCTGATAATCAAAAATTGGCAGT > 1/618192‑618671 | ggcgggAGTGATCCACTTATGGATACACCTGCGTTTACCCCGACCGCTGCAAGAAAGAACCAATTTAACCCGAATTTATTATTAGAACAAGGTACGCGTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATcc < 1:455212/250‑1 (MQ=255) cTTATGGATACACCTGCGTTTACCCCGACCGCTGCAAGAAAGAACCAATTTAACCCGAATTTATTATTAGAACAAGGTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTa > 1:656288/1‑251 (MQ=255) cTTATGGATACACCTGCGTTTACCCCGACCGCTGCAAGAAAGAACCAATTTAACCCGAATTTATTATTAGAACAAGGTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTa > 1:382867/1‑251 (MQ=255) tATGGATACACCTGCGTTTACCCCGACCGCTGCAAGAAAGAACCAATTTAACCCGAATTTATTATTAGAACAAGGTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTaaa > 1:118981/1‑251 (MQ=255) tATGGATACACCTGCGTTTACCCCGACCGCTGCAAGAAAGAACCAATTTAACCCGAATTTATTATTAGAACAAGGTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTaaa > 1:532583/1‑251 (MQ=255) cacCTGCGTTTACCCCGACCGCTGCAAGAAAGAACCAATTTAACCCGAATTTATTATTAGAACAAGGTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCt > 1:336299/1‑250 (MQ=255) gCGTTTACCCCGACCGCTGCAAGAAAGAACCAATTTAACCCGAATTTATTATTAGAACAAGGTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGtt > 1:42695/1‑251 (MQ=255) cGTTTACCCCGACCGCTGCAAGAAAGAACCAATTTAACCCGAATTTATTATTAGAACAAGGTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTc < 1:649541/251‑1 (MQ=255) tACCCCGACCGCTGCAAGAAAGAACCAATTTAACCCGAATTTATTATTAGAACAAGGTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCa < 1:611472/249‑1 (MQ=255) aTTTAACCCGAATTTATTATTAGAACAAGGTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAg > 1:310556/1‑251 (MQ=255) tattaGAACAAGGTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATcc < 1:709778/171‑1 (MQ=255) attaGAACAAGGTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAg < 1:292858/159‑1 (MQ=255) gAACAAGGTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATTAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTgag > 1:27302/1‑251 (MQ=255) gAACAAGGTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTgag > 1:494307/1‑251 (MQ=255) aGGTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGt > 1:689921/1‑251 (MQ=255) gTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTc < 1:43339/191‑1 (MQ=255) cGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTc > 1:423129/1‑203 (MQ=255) cGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGa > 1:901792/1‑251 (MQ=255) cGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGa > 1:414974/1‑251 (MQ=255) gCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTT‑ATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGaaa > 1:724543/1‑251 (MQ=255) cTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGaaa > 1:537639/1‑251 (MQ=255) ttCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGA‑TTTTTTCCCGTTGAGAAAGTTGGGAAAGCgg > 1:562439/1‑250 (MQ=255) cTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCtt > 1:488223/1‑251 (MQ=255) tgtgTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGt < 1:777139/251‑1 (MQ=255) gtgtATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATcc < 1:462515/144‑1 (MQ=255) gtgtATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAAt > 1:810607/1‑164 (MQ=255) gtgtATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGtt > 1:875471/1‑251 (MQ=255) gtgtATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGtt > 1:797086/1‑251 (MQ=255) gtATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTc > 1:813100/1‑174 (MQ=255) ttACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGcc < 1:777563/251‑1 (MQ=255) tACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCt < 1:238935/251‑1 (MQ=255) aaGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCa < 1:358086/251‑1 (MQ=255) ttCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTgg < 1:14196/132‑1 (MQ=255) ttCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAAt > 1:874357/1‑251 (MQ=255) cAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCt > 1:616416/1‑185 (MQ=255) atatTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAg > 1:679063/1‑206 (MQ=255) atatTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCa > 1:141450/1‑239 (MQ=255) atatTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAAt < 1:491734/251‑1 (MQ=255) atatTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAAt < 1:171953/251‑1 (MQ=255) atTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTc > 1:572602/1‑162 (MQ=255) ggtggGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTc > 1:238071/1‑159 (MQ=255) ggcaggcaAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGAc < 1:854197/250‑1 (MQ=255) ggcaAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTc > 1:684229/1‑136 (MQ=255) gTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCt < 1:410989/165‑1 (MQ=255) gTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCa < 1:530067/221‑1 (MQ=255) gTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTtc < 1:89312/247‑1 (MQ=255) gTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAg > 1:292909/1‑194 (MQ=255) gTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTa > 1:640140/1‑251 (MQ=255) gTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTa > 1:568827/1‑251 (MQ=255) gTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTa > 1:718878/1‑251 (MQ=255) gTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTa > 1:381312/1‑251 (MQ=255) ttattGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTAttt < 1:333350/251‑1 (MQ=255) attGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGt > 1:210014/1‑251 (MQ=255) attGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGt > 1:155535/1‑251 (MQ=255) attGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGt < 1:141500/251‑1 (MQ=255) gCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTg > 1:672567/1‑202 (MQ=255) gCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGtttt > 1:138358/1‑251 (MQ=255) gCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGtttt > 1:274719/1‑251 (MQ=255) atgTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGt < 1:145224/251‑1 (MQ=255) gtgtAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTc < 1:800755/117‑1 (MQ=255) gtgtAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCt < 1:143773/145‑1 (MQ=255) gtgtAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGAc > 1:630559/1‑221 (MQ=255) gtgtAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTaa > 1:849103/1‑251 (MQ=255) aCGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTAt > 1:92679/1‑250 (MQ=255) ggCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTtctc > 1:870937/1‑216 (MQ=255) gTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATgg > 1:469930/1‑251 (MQ=255) ttAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATgg < 1:657497/250‑1 (MQ=255) ttAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATgg < 1:231461/250‑1 (MQ=255) ttAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATgg < 1:271515/250‑1 (MQ=255) ttAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATgg < 1:341595/250‑1 (MQ=255) ttAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATgg < 1:802127/250‑1 (MQ=255) ttAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATgg < 1:300473/250‑1 (MQ=255) ttAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATGGt > 1:497623/1‑251 (MQ=255) aataaGCGGTCGATGATCGCGTCCGACAGACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGtt > 1:61952/1‑164 (MQ=255) cGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATGGTGCTTTGaaa < 1:328279/249‑1 (MQ=255) cGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATGGTGCTTTGaaa < 1:690088/249‑1 (MQ=255) cGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATGGTGCTTTGaaa < 1:567080/249‑1 (MQ=255) gTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAAt > 1:93886/1‑91 (MQ=255) gTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGAtt < 1:469581/106‑1 (MQ=255) gTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATGGTGCTTTGAAatat > 1:798129/1‑250 (MQ=255) gTCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATGGTGCTTTGAAatat > 1:437639/1‑250 (MQ=255) tCGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATGGTGCTTTGAAATATcc < 1:147333/251‑1 (MQ=255) cGATGATCGCGTCCGACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATGGTGCTTTGAAATATCCt < 1:277827/251‑1 (MQ=255) gACAAACCGCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCCCGGACATTTTCTCTCCTATTTGt > 1:432911/1‑193 (MQ=255) gCTTTGTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAAt < 1:536655/159‑1 (MQ=255) gTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAACATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCCTTGAGACAGTTGGGAAAGCGCCTTGTTTTGCCTCTTCTCCCATTTCTATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGTTTATTTATCTTCTTTATGGTGCttttcattatcc > 1:349899/1‑214 (MQ=255) gTTTTGCAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATGGTGCTTTGAAATATCCTGTTCCTGATAATCAAAAATTGGCAGt > 1:729005/1‑250 (MQ=255) | GGCGGGAGTGATCCACTTATGGATACACCTGCGTTTACCCCGACCGCTGCAAGAAAGAACCAATTTAACCCGAATTTATTATTAGAACAAGGTACGCTTATTCCTTGTGTATTACGTGTGAAAGTGATTTCCAATATTGGTGGGCAGGCAAGTTGTATTATTGCAAATGATGTGTAAACGTTCCGGCGTTAATAATAAGCGGTCGATGATCGCGTCCGACAAACCGCTTTGTTTTACAGCATCAATATCCTGCGCGTTGGCGGCTAAAATACGCTCCTGTTCCAACTCCAATTACTCGGCAATGATTGTCAAGGCTTGATTTTTTTCCCGTTGAGAAAGTTGGGAAAGCGGCTTGTTTTGCCTGTTCTCCCATTTCAATTAAATTCACGGACATTTTCTCTCCTATTTGTTTTTTACGGTAATTTATCGTCTTTATGGTGCTTTGAAATATCCTGTTCCTGATAATCAAAAATTGGCAGT > 1/618192‑618671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |