| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | 1 | 1,965,734 | Δ68 bp | intergenic (+224/‑409) | unknown → / → unknown | CRISPR‑associated protein Cas2/hypothetical protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | 1 | 1965734 | 1965801 | 68 | 94 [0] | [0] 93 | unknown/unknown | CRISPR‑associated protein Cas2/hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 1965733 | 0 (0.000) | 74 (0.990) | 54/366 | 0.2 | 100% | intergenic (+223/‑477) | unknown/unknown | CRISPR‑associated protein Cas2/hypothetical protein |
| ? | 1 | 1965802 = | 0 (0.000) | intergenic (+292/‑408) | unknown/unknown | CRISPR‑associated protein Cas2/hypothetical protein | |||||
GTTTAAAGATGTGCTTGTTGTCTAGCTCGCTAACTCCTAGTTCTCATCAAATTCCCGTCAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACTGCTGGATTACGTGGAATAGGCGGAATCTTTAGTGGGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACACTACCGGCACCTGGAATTGGTTAGCCAATACCCGCAGCCATCTTCGGGTGGATCTGTTTTGAAATAGGCGCTTTGTTACATCTGAACTCTGACACCAACTAAACTAAGCACCTTATAAAAATAAGGTGCTTTTCTTTTCCCGCAAACCAACACAAAACTCCTTGCCCTTCCTCCGCAAAAT > 1/1965486‑1965983 | gtTTAAAGATGTGCTTGTTGTCTAGCTCGCTAACTCCTAGTTCTCATCAAATTCCCGTCAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACa > 1:284812‑M1/1‑248 (MQ=255)gtTTAAAGATGTGCTTGTTGTCTAGCTCGCTAACTCCTAGTTCTCATCAAATTCCCGTCAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACa > 1:365918‑M1/1‑248 (MQ=255) tgtCTAGCTCGCTAACTCCTAGTTCTCATCAAATTCCCGTCAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattgg > 1:593081‑M1/1‑230 (MQ=255) gtCTAGCTCGCTAACTCCTAGTTCTCATCAAATTCCCGTCAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaatt < 1:481699‑M1/248‑20 (MQ=255) tAACTCCTAGTTCTCATCAAATTCCCGTCAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacc < 1:411388‑M1/251‑34 (MQ=255) tAACTCCTAGTTCTCATCAAATTCCCGTCAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacc < 1:629809‑M1/251‑34 (MQ=255) cTCCTAGTTCTCATCAAATTCCCGTCAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccg > 1:161774‑M1/1‑215 (MQ=255) tcaAATTCCCGTCAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcggg < 1:198621‑M1/251‑50 (MQ=255) cGTCAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAAC > 1:715174‑M1/1‑193 (MQ=255) aGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttg > 1:164285‑M1/1‑189 (MQ=255) ggCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttga > 1:127754‑M1/1‑188 (MQ=255) ggCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAAGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttga > 1:444349‑M1/1‑188 (MQ=255) cTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaa < 1:856317‑M1/251‑66 (MQ=255) cTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagcca > 1:38231‑M1/1‑186 (MQ=255) aTCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcg > 1:510742‑M1/1‑180 (MQ=255) gATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttg > 1:599048‑M1/1‑175 (MQ=255) ttCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttac < 1:93885‑M1/251‑81 (MQ=255) aTTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaact > 1:237712‑M1/1‑161 (MQ=255) aTTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatc < 1:62831‑M1/244‑84 (MQ=255) cAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacacca > 1:325649‑M1/1‑153 (MQ=255) gTTAATTCATTTGTATAACGACGACATGCCTGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGCTTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaa > 1:434973‑M1/1‑151 (MQ=255) gTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaa > 1:843794‑M1/1‑151 (MQ=255) ttCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaac < 1:242110‑M1/251‑106 (MQ=255) ttCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAAGCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaac < 1:435236‑M1/251‑106 (MQ=255) cATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaac > 1:583219‑M1/1‑144 (MQ=255) gTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaa < 1:141155‑M1/204‑66 (MQ=255) gTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatc < 1:707741‑M1/194‑56 (MQ=255) tataACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcac < 1:386444‑M1/250‑113 (MQ=255) acgacgACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaac < 1:164228‑M1/239‑106 (MQ=255) acgacATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaa < 1:716315‑M1/251‑121 (MQ=255) acATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaat > 1:593163‑M1/1‑128 (MQ=255) cccGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataagg < 1:182505‑M1/250‑128 (MQ=255) cccGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatctt < 1:121327‑M1/168‑46 (MQ=255) cccGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacc > 1:110058‑M1/1‑123 (MQ=255) ccGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtg > 1:392423‑M1/1‑122 (MQ=255) ccGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctg < 1:871843‑M1/179‑58 (MQ=255) ccGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcag > 1:563396‑M1/1‑122 (MQ=255) ccGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcac < 1:277880‑M1/133‑12 (MQ=255) ttATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTCTGTGTTGAAACactaccggcacctggaattggttagccaatacc > 1:334367‑M1/1‑119 (MQ=255) ataCTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgctttt > 1:724783‑M1/1‑117 (MQ=255) taCTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgc > 1:672441‑M1/1‑116 (MQ=255) taCTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaata < 1:29020‑M1/240‑125 (MQ=255) taCTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacac > 1:329042‑M1/1‑116 (MQ=255) taCTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaa > 1:618272‑M1/1‑116 (MQ=255) aCTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaa < 1:312815‑M1/235‑121 (MQ=255) cTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagcc > 1:277478‑M1/1‑114 (MQ=255) aCTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaa < 1:231017‑M1/171‑66 (MQ=255) ctctATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcc > 1:555045‑M1/1‑103 (MQ=255) ctctATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatc > 1:129075‑M1/1‑103 (MQ=255) tctATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTTAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaacc < 1:442496‑M1/251‑150 (MQ=255) ctATTTTGAAATAAGTTAGCGAAATACAGGAAGCAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaacca > 1:816000‑M1/1‑101 (MQ=255) gCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcc > 1:475467‑M1/1‑83 (MQ=255) gCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaac < 1:332928‑M1/188‑106 (MQ=255) tACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcct > 1:580377‑M1/1‑77 (MQ=255) tACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaa > 1:713997‑M1/1‑77 (MQ=255) aaTCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatat < 1:626869‑M1/251‑185 (MQ=255) tGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagact < 1:402940‑M1/251‑192 (MQ=255) ttCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccagctaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccc < 1:450510‑M1/251‑198 (MQ=255) ttCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaa > 1:522904‑M1/1‑54 (MQ=255) gTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatc < 1:471374‑M1/132‑84 (MQ=255) tttttCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttatt < 1:431144‑M1/251‑205 (MQ=255) ttCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagt < 1:432515‑M1/251‑208 (MQ=255) ttCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagt > 1:289631‑M1/1‑44 (MQ=255) ttCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcacc < 1:505845‑M1/157‑114 (MQ=255) ttCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcac > 1:454264‑M1/1‑44 (MQ=255) ttCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaact > 1:365531‑M1/1‑44 (MQ=255) cATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcg > 1:49813‑M1/1‑42 (MQ=255) cATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagt < 1:453766‑M1/249‑208 (MQ=255) cATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaac < 1:233459‑M1/237‑196 (MQ=255) cATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagac < 1:116063‑M1/232‑191 (MQ=255) cATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagac < 1:522537‑M1/232‑191 (MQ=255) atatAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataagg > 1:420042‑M1/1‑41 (MQ=255) ataGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcgggg > 1:349308‑M1/1‑39 (MQ=255) ataGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacacca < 1:700228‑M1/137‑99 (MQ=255) gAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcggggtgctt > 1:781676‑M1/1‑34 (MQ=255) aCCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcggggtgctttgtgctga > 1:794794‑M1/1‑26 (MQ=255) aCCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagac > 1:603088‑M1/1‑26 (MQ=255) aCCTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagac > 1:228354‑M1/1‑26 (MQ=255) ccTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcggggtgctttgtgctgag > 1:334357‑M1/1‑25 (MQ=255) cTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcggggtgctttgtgctgaga < 1:489254‑M1/251‑228 (MQ=255) cTTCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcggggtgctttgtgctgaga < 1:474739‑M1/251‑228 (MQ=255) tCAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcggggtgctttgtgctgagatg < 1:732125‑M1/251‑230 (MQ=255) cAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcggggtgctttgtgctgagatga > 1:177816‑M1/1‑21 (MQ=255) cAGGTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgccc > 1:400656‑M1/1‑21 (MQ=255) ggTGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcggggtgctttgtgctgagatgata > 1:222479‑M1/1‑19 (MQ=255) tGGCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcggggtgctttgtgctgagatgatacc < 1:791207‑M1/251‑235 (MQ=255) ggCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcggggtgctttgtgctgagatgatacc > 1:534753‑M1/1‑16 (MQ=255) gCTGTGTGTTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaac < 1:318715‑M1/174‑160 (MQ=255) gtgtTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcggggtgctttgtgctgagatgatacccgtgaa > 1:339360‑M1/1‑10 (MQ=255) tgtTGAAACactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcggggtgctttgtgctgagatgatacccgtgaac > 1:749230‑M1/1‑9 (MQ=255) aaaCactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagac > 1:757251‑M1/1‑4 (MQ=255) cactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcggggtgctttgtgctgagatgatacccgtgaacctgatacag < 1:530619‑M1/251‑251 (MQ=255) cactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcggggtgctttgtgctgagatgatacccgtgaacctgatacag > 1:202705‑M1/1‑1 (MQ=255) cactaccggcacctggaattggttagccaatacccgcagccatcttcgggtggatctgttttgaaataggcgctttgttacatctgaactctgacaccaactaaactaagcaccttataaaaataaggtgcttttcttttcccgcaaaccaacacaaaactccttgcccttcctccgcaaaatatatagactgaaccccgttattagtcggggtgctttgtgctgaga > 1:357378‑M1/1‑1 (MQ=255) | GTTTAAAGATGTGCTTGTTGTCTAGCTCGCTAACTCCTAGTTCTCATCAAATTCCCGTCAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGAGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACTGCTGGATTACGTGGAATAGGCGGAATCTTTAGTGGGCAGCCACCTTCAGGTGGCTGTGTGTTGAAACACTACCGGCACCTGGAATTGGTTAGCCAATACCCGCAGCCATCTTCGGGTGGATCTGTTTTGAAATAGGCGCTTTGTTACATCTGAACTCTGACACCAACTAAACTAAGCACCTTATAAAAATAAGGTGCTTTTCTTTTCCCGCAAACCAACACAAAACTCCTTGCCCTTCCTCCGCAAAAT > 1/1965486‑1965983 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |