| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 2033224 | 76 (0.870) | 4 (0.050) | 4/386 | 6.4 | 5.3% | intergenic (‑34/+162) | unknown/unknown | Autoinducer 2 (AI‑2) ABC transporter, substrate‑binding protein/Excinuclease ABC subunit C |
| ? | 1 | = 2033274 | 74 (0.940) | intergenic (‑84/+112) | unknown/unknown | Autoinducer 2 (AI‑2) ABC transporter, substrate‑binding protein/Excinuclease ABC subunit C | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCTTTCACCAAAGAAGTGATTTCACGTTAAGGGGAGCGAATCTTATTAAAATATCGGCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGCTTGTCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/2032970‑2033224‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggttcctgagcttgtcgaagAATTAGTCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCACGCCTTAGAAAAA < 1/2033274‑2033031 TCTTTCACCAAAGAAGTGATTTCACGTTAAGGGGAGCGAATCTTATTAAAATATCGGCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGCTTGT > 1:535088/1‑250 CGTTAAGGGGAGCGAATCTTATTAAAATATCGGCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGC < 1:586405/222‑1 CGTTAAGGGGAGCGAATCTTATTAAAATATCGGCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAG < 1:469463/221‑1 GCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGCTTGTCGAAGAATTAGTCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCC < 1:817914/250‑1 TTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGCTTGTCGAAGAATTAGTCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTAC < 1:23798/239‑1 TTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGCTTGTCGAAGAATTAGTCGAAGCATGAGTTTTGTGCCTAAATAGG < 1:800818/229‑1 CCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGCTTGTCGAAGAATTAGTCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTAC > 1:85832/1‑224 ACGGTTCCTGAGCTTGTCGAAGAATTAGTCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGG < 1:472360/251‑1 GTTCCTGAGCTTGTCGAAGAATTAGTCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAA < 1:16808/211‑1 GTTCCTGAGCTTGTCGAAGAATTAGTCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTT < 1:161201/205‑1 GTTCCTGAGCTTGTCGAAGAATTAGTCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAG < 1:776647/112‑1 TCCTGAGCTTGTCGAAGAATTAGTCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCACG > 1:585568/1‑250 TCCTGAGCTTGTCGAAGAATTAGTCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACG > 1:33813/1‑180 TTGTCGAAGAATTAGTCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCACGCCTTAGAAA < 1:617074/251‑1 GTCGAAGAATTAGTCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCACGCCTTAGAAAAA > 1:523635/1‑251 GTCGAAGAATTAGTCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCACGCCTTAGAAA < 1:190974/249‑1 GAATTAGTCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGC > 1:559719/1‑231 TCTTTCACCAAAGAAGTGATTTCACGTTAAGGGGAGCGAATCTTATTAAAATATCGGCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGCTTGTCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/2032970‑2033224‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggttcctgagcttgtcgaagAATTAGTCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCACGCCTTAGAAAAA < 1/2033274‑2033031 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |