| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 682299 | NA (NA) | 6 (0.070) | 5/420 | 6.3 | 10.1% | coding (220/762 nt) | unknown | Mobile element protein |
| ? | 1 | = 2156748 | 55 (0.630) | coding (55/243 nt) | unknown | Mobile element protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGTTAAATGACTTACTTCGTGTGGCTAAAATGCCTCGTTCTATCTTTTATTATCAGCAAGTTAAACACGATTATCGTGAGATAAAAGAAACTATCTTGTTGCGGTATAAAAAGAACAGAAAACGAGATGGCTATCGCCCAATGACACTCAAATTACGTCAAATGGGTTTCCATTTGAATCATAAAACGGTGTTAAAACTGATGAATGCGTTAGGTATTCATTCTATTTTACGCAAGAAAAGACATAGAAaacga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/682051‑682299‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACGAGGCATTTTAGCCACACGAAGTAAGTCATTTAACGCGTGATTTGGCTTCAATCTTTCAATGATTTTTCTTTTTTCTGTCGCTGTTTTTGACGGTCGAGTGCCTCCAACTCCTTTAGGTAAGCAATCTGTGCACGTGCTAATGCCAGCTCTCGCTGCAGCTTTTTAAACGCTTTTGGGGAAAAGTCTGTTTGTTCCGGGATTTCAATCGCTTTCTTTTTCATC < 1/2156748‑2156523 CGTTAAATGACTTACTTCGTGTGGCTAAAATGCCTCGTTCTATCTTTTATTATCAGCAAGTTAAACACGATTATCGTGAGATAAAAGAAACTATCTTGTTGCGGTATAAAAAGAACAGAAAACGAGATGGCTATCGCCCAATGACACTCAAATTACGTCAAATGGGTTTCCATTTGAATCATAAAACGGTGTTAAAACTGATGAATGCGTTAGGTATTCATTCTATTTTACGCAAGAAAAGACATAGAAAA < 1:491060/251‑1 AATGACTTACTTCGTGTGGCTAAAATGCCTCGTTCTATCTTTTATTATCAGCAAGTTAAACACGATTATCGTGAGATAAAAGAAACTATCTTGTTGCGGTATAAAAAGAACAGAAAACGAGATGGCTATCGCCCAATGACACTCAAATTACGTCAAATGGGTTTCCATTTGAATCATAAAACGGTGTTAAAACTGATGAATGCGTTAGGTATTCATTCTATTTTACGCAAGAAAAGACATAGAAAACGAGG < 1:734988/251‑1 ATGACTTACTTCGTGTGGCTAAAATGCCTCGTTCTATCTTTTATTATCAGCAAGTTAAACACGATTATCGTGAGATAAAAGAAACTATCTTGTTGCGGTATAAAAAGAACAGAAAACGAGATGGCTATCGCCCAATGACACTCAAATTACGTCAAATGGGTTTCCATTTGAATCATAAAACGGTGTTAAAACTGATGAATGCGTTAGGTATTCATTCTATTTTACGCAAGAAAAGACATAGAAAACGAGGC < 1:847494/251‑1 ATGACTTACTTCGTGTGGCTAAAATGCCTCGTTCTATCTTTTATTATCAGCAAGTTAAACACGATTATCGTGAGATAAAAGAAACTATCTTGTTGCGGTATAAAAAGAACAGAAAACGAGATGGCTATCGCCCAATGACACTCAAATTACGTCAAATGGGTTTCCATTTGAATCATAAAACGGTGTTAAAACTGATGAATGCGTTAGGTATTCATTCTATTTTACGCAAGAAAAGACATAGAAAACGAGG > 1:215071/1‑250 GCTAAAATGCCTCGTTCTATCTTTTATTATCAGCAAGTTAAACACGATTATCGTGAGATAAAAGAAACTATCTTGTTGCGGTATAAAAAGAACAGAAAACGAGATGGCTATCGCCCAATGACACTCAAATTACGTCAAATGGGTTTCCATTTGAATCATAAAACGGTGTTAAAACTGATGAATGCGTTAGGTATTCATTCTATTTTACGCAAGAAAAGACATAGAAAACGAGGCAaaac < 1:456071/239‑5 ATCTTTTATTATCAGCAAGTTAAACACGATTATCGTGAGATAAAAGAAACTATCTTGTTGCGGTATAAAAAGAACAGAAAACGAGATGGCTATCGCCCAATGACACTCAAATTACGTCAAATGGGTTTCCATTTGAATCATAAAACGGTGTTAAAACTGATGAATGCGTTAGGTATTCATTCTATTTTACGCAAGAAAAGACATGGAAAACGA > 1:131697/1‑213 AGTTAAACACGATTATCGTGAGATAAAAGAAACTATCTTGTTGCGGTATAAAAAGAACAGAAAACGAGATGGCTATCGCCCAATGACACTCAAATTACGTCAAATGGGTTTCCATTTGAATCATAAAACGGTGTTAAAACTGATGAATGCGTTAGGTATTCATTCTATTTTACGCAAGAAAAGACATAGAAAACGAGGCATTTTAGCCACACGAAGTAAGTCATTTAACGCGTGATTTGGCTTCAATCTTT > 1:709404/1‑251 GTTAAACACGATTATCGTGAGATAAAAGAAACTATCTTGTTGCGGTATAAAAAGAACAGAAAACGAGATGGCTATCGCCCAATGACACTCAAATTACGTCAAATGGGTTTCCATTTGAATCATAAAACGGTGTTAAAACTGATGAATGCGTTAGGTATTCATTCTATTTTACGCAAGAAAAGACATAGAAAAC < 1:308548/193‑1 CAAATTACGTCAAATGGGTTTCCATTTGAATCATAAAACGGTGTTAAAACTGATGAATGCGTTAGGTATTCATTCTATTTTACGCAAGAAAAGACATAGAAAACGA > 1:838348/1‑106 TGGGTTTCCATTTGAATCATAAAACGGTGTTAAAACTGATGAATGCGTTAGGTATTCATTCTATTTTACGCAAGAAAAGACATAGAAAACGAGGCATTTTAGCCACACGAAGTAAGTCATTTAACGCGTGATTTGGCTTCAATCTTTCAATGATTTTTCTTTTTTCTGTCGCTGTTTTTGACGGTCGAGTGCCTCCAACTCCTTTAGGTAAGCAATCTGTGCACGTGCTAATGC < 1:338931/234‑1 GTGTTAAAACTGATGAATGCGTTAGGTATTCATTCTATTTTACGCAAGAAAAGACATAGAAAAC > 1:425020/1‑64 AACGAGGCATTTTAGCCACACGAAGTAAGTCATTTAACGCGTGATTTGGCTTCAATCTTTCAATGATTTTTCTTTTTTCTGTCGCTGTTTTTGACGGTCGAGTGCCTCCAACTCCTTTAGGTAAGCAATCTGTGCACGTGCTAATGCCAGCTCTCGCTGCAGCTTTTTAAACGCTTTTGGGGAAAAGTCTGTTTGTTCCGGGATTTCAATCGCTTTCTTTTTCATC > 1:824205/1‑226 AGGCATTTTAGCCACACGAAGTAAGTCATTTAACGCGTGATTTGGCTTCAATCTTTCAATGATTTTTCTTTTTTCTGTCGCTGTTTTTGACGGTCGAGTGCCTCCAACTCCTTTAGGTAAGCAATCTGTGCAC < 1:817342/133‑1 CGTTAAATGACTTACTTCGTGTGGCTAAAATGCCTCGTTCTATCTTTTATTATCAGCAAGTTAAACACGATTATCGTGAGATAAAAGAAACTATCTTGTTGCGGTATAAAAAGAACAGAAAACGAGATGGCTATCGCCCAATGACACTCAAATTACGTCAAATGGGTTTCCATTTGAATCATAAAACGGTGTTAAAACTGATGAATGCGTTAGGTATTCATTCTATTTTACGCAAGAAAAGACATAGAAaacga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/682051‑682299‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACGAGGCATTTTAGCCACACGAAGTAAGTCATTTAACGCGTGATTTGGCTTCAATCTTTCAATGATTTTTCTTTTTTCTGTCGCTGTTTTTGACGGTCGAGTGCCTCCAACTCCTTTAGGTAAGCAATCTGTGCACGTGCTAATGCCAGCTCTCGCTGCAGCTTTTTAAACGCTTTTGGGGAAAAGTCTGTTTGTTCCGGGATTTCAATCGCTTTCTTTTTCATC < 1/2156748‑2156523 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |