Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	6	47	+T	intergenic (–/–)	– / –	–/–

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	6	43	1	.	T	100.0%	137.6 / NA	42	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base T (19/23);  total (19/23)

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTA‑TTTTCCGCTTGC‑GG‑AAAATGCAGGGCGAAGGCTTGCAGCCCGGTAAATAATGCTCGATGTTATTCGGGCATTTTTATTTGTTGCGCG‑CTGATGATTTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAACTGCTGATTAGATAATGCGATACGTGCTTGAATTTATGCTTACATTTTTAAATAAGTCTTGATAAATCAATATGTA  >  6/1‑272                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                         atctaattttgttaagacggatacaggtgttaatcaatctccgacacttataaaacgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAActa‑tttttga                                                                                                                                                                                                                                   >  1:897988‑M2/202‑248 (MQ=255)      attttgttaagacggatacaggtgttaatcaatctccgacacttataaaacgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGtctaacta‑tttttgagcaag                                                                                                                                                                                                                              >  1:47361‑M2/197‑243 (MQ=255)                gacggatacaggtgttaatcaatctccgacacttataaaacgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAgtgaaacttgtctaacta‑tttttgagcaagctcaaaaatg                                                                                                                                                                                                                    >  1:631333‑M2/187‑233 (MQ=255)                   ggatacaggtgttaatcaatctccgacacttataaaacgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaataatgatactaaGACAGATATAGTGATTTTACTCcaagtgaaacttgtctaacta‑tttttgagcaagctcaaaaatgtag                                                                                                                                                                                                                 >  1:92644‑M2/184‑230 (MQ=255)                    gatacaggtgttaatcaatctccgacacttataaaacgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTccaagtgaaacttgtctaacta‑tttttgagcaagctcaaaaatgtagg                                                                                                                                                                                                                >  1:60513‑M2/183‑229 (MQ=255)                                            acacttataaaacgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGtaaac                                                                                                                                                                                        <  1:828510‑M2/93‑2 (MQ=255)                                            acacttataaaacgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtctttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGtaaac                                                                                                                                                                                        <  1:639394‑M2/93‑2 (MQ=255)                                             cacttataaaacgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGgtaaacc                                                                                                                                                                                       <  1:119271‑M2/94‑3 (MQ=255)                                              acttataaaacgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCggtaaacca                                                                                                                                                                                      <  1:283417‑M2/95‑4 (MQ=255)                                                   taaaacgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTc                                                                                                                                                                                 <  1:21991‑M2/100‑1 (MQ=255)                                                     aaacgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGtaaac                                                                                                                                                                                        >  1:882242‑M2/150‑241 (MQ=255)                                                       acgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATg                                                                                                                                                                             <  1:871823‑M2/104‑1 (MQ=255)                                                        cgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGt                                                                                                                                                                            <  1:796521‑M2/105‑1 (MQ=255)                                                          cgacattgtcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTa                                                                                                                                                                          <  1:624089‑M2/107‑1 (MQ=255)                                                                 gtcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCggg                                                                                                                                                                    >  1:315815‑M2/138‑250 (MQ=255)                                                                  tcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGt                                                                                                                                                                            <  1:92661‑M2/105‑1 (MQ=255)                                                                  tcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGc                                                                                                                                                                   <  1:251811‑M2/114‑1 (MQ=255)                                                                  tcacagatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCa                                                                                                                                                                  >  1:321878‑M2/137‑251 (MQ=255)                                                                       gatgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCAtttt                                                                                                                                                              >  1:791560‑M2/132‑250 (MQ=255)                                                                        atgtaagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTa                                                                                                                                                            >  1:18069‑M2/131‑251 (MQ=255)                                                                           taagtgtaaaaaatggcgatgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAGCCATGCTCGATGTTATTCGGGCATTTTTAttt                                                                                                                                                         <  1:721810‑M2/124‑1 (MQ=255)                                                                                             atgtgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTtttattttttgcgcgtacctaaatt                                                                                                                                       >  1:212832‑M2/110‑241 (MQ=255)                                                                                                tgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCatttttattttttgcgcgtacctaaatttaa                                                                                                                                    >  1:137407‑M2/107‑238 (MQ=255)                                                                                                tgattgttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTttttgcgcgtacc                                                                                                                                             <  1:57031‑M2/136‑5 (MQ=255)                                                                                                     gttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTcgggcatttttattttttgcgcgtacctaaatttaatcgag                                                                                                                               >  1:717953‑M2/102‑233 (MQ=255)                                                                                                     gttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTcgggcatttttattttttgcgcgtacctaaatttaatcgag                                                                                                                               >  1:322230‑M2/102‑233 (MQ=255)                                                                                                     gttcttggtggtctggctgaaaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTttattttttgcgcgtacctaaat                                                                                                                                        <  1:275550‑M2/141‑10 (MQ=255)                                                                                                                         aaataaaataacggaaggtgaaacaggtttttcatttcttcctaaaggttttttaacgggaaaatccaaaaatgatactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGtaaac                                                                                                                                                                                        >  1:587545‑M2/82‑173 (MQ=255)                                                                                                                                                                                     aaaatccaaaaatgatactaagACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTGCGCG‑TACCTAAATTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAACTGCTGATTAGATAATGCGATACGTGCTTGaa                                              <  1:341661/230‑1 (MQ=255)                                                                                                                                                                                                 tgatactaagACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTGCGCG‑TACCTAAATTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAAc                                                                             >  1:400230/10‑208 (MQ=255)                                                                                                                                                                                                    tactaagACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTGCGCG‑TACCTAAATTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAACTGCTGATTAGATAATGc                                                            <  1:531319/216‑1 (MQ=255)                                                                                                                                                                                                    tactaagACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTGCGCG‑TACCTAAATTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAACTGCTGATTAGATAATGCGATAc                                                       >  1:303813/7‑227 (MQ=255)                                                                                                                                                                                                    tactaagACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTGCGCG‑TACCTAAATTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAACTGCTGATTAGATAATGCGATACg                                                      <  1:613501/222‑1 (MQ=255)                                                                                                                                                                                                    tactaaGACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTa                                                                                                                                                                                                                                           >  1:847470‑M2/7‑49 (MQ=255)                                                                                                                                                                                                     actaagACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTGCGCG‑TACCTAAATTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAACTGCTGATTAGATAATGCGATACGTGCTTGAATTTATGCTTACAtttt                              >  1:739068/6‑251 (MQ=255)                                                                                                                                                                                                      ctaagACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTGCGCG‑TACCTAAATTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAACTGCTGATTAGATAATGCGATACGTGCTTGAATTTATGCTTACAttttt                             >  1:756241/5‑251 (MQ=255)                                                                                                                                                                                                          gACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTgcgcgtacctaaatttaat                                                                                                                                   >  1:89368/1‑132 (MQ=255)                                                                                                                                                                                                          gACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTGCGCG‑TACCTAAATTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTaa                                                                                           <  1:723725/185‑1 (MQ=255)                                                                                                                                                                                                          gACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTGCGCG‑TACCTAAATTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAACTGCTGATTAGATAATGCGATACGTGCTTGAATTTa                                          >  1:791023/1‑234 (MQ=255)                                                                                                                                                                                                            cAGATATAGTGATTTTCCTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCAGGCAGAATGTTATTCGGGCATTTTTATTTTTTCCGCG‑TCCATAAATTAAATCGAGAATTGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAACTGCTGATTAGATAATGCGATAc                                                       <  1:226758/219‑1 (MQ=255)                                                                                                                                                                                                               atatAGTGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTGCGCG‑TACCTAAATTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAACTGCTGATTAGAt                                                                 <  1:171824/206‑1 (MQ=255)                                                                                                                                                                                                                     tGATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGGTTGCAGCCCGATAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTGCGCGTCCCA‑AAATTTAATCAAGAAATAAAAATTTACCGCCCCTGCAAATACCCCTAAAGCCACGTAATAACTGCTGATTAGATAATGCGATACGTGCTTGAATTTATGCTTACATTTTTAAATAAGTCTTGATa              <  1:711642/251‑1 (MQ=255)                                                                                                                                                                                                                      gATTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTAttttt                                                                                                                                                       <  1:524522/114‑3 (MQ=255)                                                                                                                                                                                                                       aTTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTGCGCG‑TACCTAAATTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAAc                                                                             >  1:799159/1‑186 (MQ=255)                                                                                                                                                                                                                       aTTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTGCGCG‑TACCTAAATTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAACTGCTGATTAGATAATGCGATACGTGCTTGAATTTATGCTTACATTTTTAAATAAGTc                    <  1:426022/243‑1 (MQ=255)                                                                                                                                                                                                                       aTTTTACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTGCGCG‑TACCTAAATTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAACTGCTGATTAGATAATGCGATACGTGCTTGAATTTATGCTTACATTTTTAAATAAGTCTTGATaaa            <  1:268366/251‑1 (MQ=255)                                                                                                                                                                                                                        ttttACTCCAAGTGAAACTTGTCTAACTATTTTTGAGCAAGCTCA‑AAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTGCGCG‑TACCTAAATTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAACTGCTGATTAGATAATGCGATACGTGCTTGAATTTATGCTTACATTTTTAAATAAGTCTTGATAAAt           >  1:784907/1‑251 (MQ=255)                                                                                                                                                                                                                                 aaGTGAAACTTGTCTAACTATTTTTGAGCAAGC‑TCAAAAATGTAGGGCGAAGGCTTGCAGCCCGGTAAACCATGCTCGATGTTATTCGGGCATTTTTATTTTTTGCGCG‑TACCTAAATTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAACTGCTGATTAGATAATGCGATACGTGCTTGAATTTATGCTTACATTTTTAAATAAGTCTTGATAAATCAatattta  >  1:844796/1‑248 (MQ=255)                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                         ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GACAGATATAGTGATTTTACTCCAAGTGAAACTTGTCTAACTA‑TTTTCCGCTTGC‑GG‑AAAATGCAGGGCGAAGGCTTGCAGCCCGGTAAATAATGCTCGATGTTATTCGGGCATTTTTATTTGTTGCGCG‑CTGATGATTTTAATCGAGAAATGAAAATTTCCCGCCCCTGCAAATACCCCTAAAGCCACGTAATAACTGCTGATTAGATAATGCGATACGTGCTTGAATTTATGCTTACATTTTTAAATAAGTCTTGATAAATCAATATGTA  >  6/1‑272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑