Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,460,978 (A)6→7 intergenic (‑31/+23) unknown ← / ← unknown Glutamine‑‑fructose‑6‑phosphate aminotransferase [isomerizing] (EC 2.6.1.16)/Transcriptional regulator of glmS gene, DeoR family

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,460,9721.A100.0% 281.7 / NA 82intergenic (‑25/+29)unknown/unknownGlutamine‑‑fructose‑6‑phosphate aminotransferase [isomerizing] (EC 2.6.1.16)/Transcriptional regulator of glmS gene, DeoR family
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base A (42/40);  total (42/40)

GGTATGCGCAATCCCGGTGCCGCCGATTAATGGCGTTTTTTCCACTGCATCATCTAACGCTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAAT‑AAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCACTTCCGCCATAACACGGCTTAAACCAACCAATTCGTTAAAGG  >  1/1460729‑1461209
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                             
ggTATGCGCAATCCCGGTGCCGCCGATTAATGGCGTTTTTTCCACTGCATCATCTAACGCTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAAT‑aaaaaaa                                                                                                                                                                                                                                        >  1:649087/1‑250 (MQ=255)
     gcgcAATCCCGGTGCCGCCGATTAATGGCGTTTTTTCCACTGCATCATCTAACGCTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGttt                                                                                                                                                                                                                                    >  1:852786/1‑251 (MQ=255)
     gcgcAATCCCGGTGCCGCCGATTAATGGCGTTTTTTCCACTGCATCATCTAACGCTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGttt                                                                                                                                                                                                                                    >  1:290910/1‑251 (MQ=255)
     gcgcAATCCCGGTGCCGCCGATTAATGGCGTTTTTTCCACTGCATCATCTAACGCTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGttt                                                                                                                                                                                                                                    >  1:269802/1‑251 (MQ=255)
           tCCCGGTGCCGCCGATTAATGGCGTTTTTTCCACTGCATCATCTAACGCTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGaaa                                                                                                                                                                                                                              >  1:397088/1‑251 (MQ=255)
                        gATTAATGGCGTTTTTTCCACTGCATCATCTAACGCTTTCACTTTGCCTAAGCAGCGCACACGTTGTAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACttt                                                                                                                                                                                                                 >  1:514318/1‑251 (MQ=255)
                        gATTAATGGCGTTTTTTCCACTGCATCATCTAACGCTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACttt                                                                                                                                                                                                                 >  1:43150/1‑251 (MQ=255)
                              tGGCGTTTTTTCCACTGCATCATCTAACGCTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGcac                                                                                                                                                                                                           <  1:62885/251‑1 (MQ=255)
                              tGGCGTTTTTTCCACTGCATCATCTAACGCTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGcac                                                                                                                                                                                                           <  1:700025/251‑1 (MQ=255)
                                        tCCACTGCATCATCTAACGCTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACctc                                                                                                                                                                                                 <  1:267418/251‑1 (MQ=255)
                                              gCATCATCTAACGCTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACCCATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGc                                                                                                                                                                                            >  1:447831/1‑250 (MQ=255)
                                                   atcTAACGCTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGcac                                                                                                                                                                                                           <  1:813976/230‑1 (MQ=255)
                                                   atcTAACGCTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGa                                                                                                                                                                                                        >  1:593486/1‑233 (MQ=255)
                                                    tcTAACGCTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGc                                                                                                                                                                                     <  1:847854/251‑1 (MQ=255)
                                                           cTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATa                                                                                                                                                                              >  1:660154/1‑251 (MQ=255)
                                                           cTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATa                                                                                                                                                                              >  1:38397/1‑251 (MQ=255)
                                                                   ttGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGttttt                                                                                                                                                                      >  1:235968/1‑251 (MQ=255)
                                                                         aaGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCt                                                                                                                                                                   >  1:383432/1‑248 (MQ=255)
                                                                                     cGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACgg                                                                                                                                                                           >  1:294902/1‑228 (MQ=255)
                                                                                     cGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGt                                                                                                                                                                          <  1:628140/229‑1 (MQ=255)
                                                                                       ttGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACaaa                                                                                                                                                   >  1:837179/1‑250 (MQ=255)
                                                                                                        aaTTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATAc                                                                                                                                  <  1:677259/250‑1 (MQ=255)
                                                                                                            gACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCaa                                                                                                                             >  1:405392/1‑251 (MQ=255)
                                                                                                            gACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCaa                                                                                                                             >  1:36063/1‑251 (MQ=255)
                                                                                                                                     tAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACAt                                                                                                     <  1:141694/250‑1 (MQ=255)
                                                                                                                                     tAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACAt                                                                                                     <  1:678731/250‑1 (MQ=255)
                                                                                                                                     tAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACAt                                                                                                     <  1:800890/250‑1 (MQ=255)
                                                                                                                                      aaCCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAAt                                                                                                            <  1:514468/242‑1 (MQ=255)
                                                                                                                                        ccACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACAt                                                                                                     <  1:289332/247‑1 (MQ=255)
                                                                                                                                               aCTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGc                                                                                                                                                                                            <  1:510649/153‑1 (MQ=255)
                                                                                                                                               aCTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGt                                                                                                                                                                          >  1:61856/1‑171 (MQ=255)
                                                                                                                                               aCTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTc                                                                                                          >  1:655863/1‑235 (MQ=255)
                                                                                                                                               aCTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTg                                                                                          >  1:266234/1‑251 (MQ=255)
                                                                                                                                                       cGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGtaattaat                                                                                                                                    >  1:842906/1‑201 (MQ=255)
                                                                                                                                                         aTGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACttt                                                                                                                                                                                                                 <  1:746191/122‑1 (MQ=255)
                                                                                                                                                         aTGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAAt                                                                                                                                                                               <  1:304267/156‑1 (MQ=255)
                                                                                                                                                         aTGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGtaattaat                                                                                                                                    <  1:799894/199‑1 (MQ=255)
                                                                                                                                                         aTGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGtaattaat                                                                                                                                    <  1:289618/199‑1 (MQ=255)
                                                                                                                                                             aaTCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTtg                                                                            <  1:355630/251‑1 (MQ=255)
                                                                                                                                                                  gTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGAtt                                                                       >  1:685335/1‑251 (MQ=255)
                                                                                                                                                                      attaaAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTtgctg                                                                                                                      >  1:567779/1‑200 (MQ=255)
                                                                                                                                                                            aTTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATcac                                                             <  1:136186/251‑1 (MQ=255)
                                                                                                                                                                                ccGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATc                                                         <  1:71790/251‑1 (MQ=255)
                                                                                                                                                                                     atatCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGa                                                                                                                                                                                                        <  1:894698/103‑1 (MQ=255)
                                                                                                                                                                                     atatCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACgg                                                                                                                                                                           <  1:395806/132‑1 (MQ=255)
                                                                                                                                                                                     atatCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGtaattaat                                                                                                                                    >  1:365464/1‑171 (MQ=255)
                                                                                                                                                                                     atatCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATAc                                                                                                                                  <  1:615475/173‑1 (MQ=255)
                                                                                                                                                                                     atatCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCaa                                                                                                                             >  1:587293/1‑178 (MQ=255)
                                                                                                                                                                                     atatCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTtgc                                                                                                                        <  1:340385/183‑1 (MQ=255)
                                                                                                                                                                                     atatCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGc                                                                                                <  1:507923/207‑1 (MQ=255)
                                                                                                                                                                                       atCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACAt                                                                                                     >  1:751470/1‑200 (MQ=255)
                                                                                                                                                                                       atCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAAt                                                          >  1:116255/1‑243 (MQ=255)
                                                                                                                                                                                        tCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACg                                                 <  1:809829/251‑1 (MQ=255)
                                                                                                                                                                                           cGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGtaattaat                                                                                                                                    <  1:431377/165‑1 (MQ=255)
                                                                                                                                                                                           cGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACAt                                                                                                     >  1:219775/1‑196 (MQ=255)
                                                                                                                                                                                            gTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAAAGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGc                                              >  1:112831/1‑250 (MQ=255)
                                                                                                                                                                                             ttGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGc                                                                                                                                                                                     <  1:624169/114‑1 (MQ=255)
                                                                                                                                                                                               gtgCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGcac                                                                                                                                                                                                           <  1:465788/90‑1 (MQ=255)
                                                                                                                                                                                               gtgCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCAc                                                       >  1:710271/1‑238 (MQ=255)
                                                                                                                                                                                                           cgacgaTTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACAt                                                                                                     >  1:19826/1‑180 (MQ=255)
                                                                                                                                                                                                            gacgaTTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCACTTCCGcc                                    >  1:653260/1‑244 (MQ=255)
                                                                                                                                                                                                                aTTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCACTTCCGCCATAACACgg                           >  1:463863/1‑249 (MQ=255)
                                                                                                                                                                                                                aTTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCACTTCCGCCATAACACgg                           >  1:373919/1‑249 (MQ=255)
                                                                                                                                                                                                                aTTCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCACTTCCGCCATAACACGGc                          <  1:799085/250‑1 (MQ=255)
                                                                                                                                                                                                                 ttCCACACATAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACAt                                                                                                     >  1:750927/1‑174 (MQ=255)
                                                                                                                                                                                                                     ccacaTAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCACTTCCGCCATAACACGGCTTAaac                    <  1:366930/250‑1 (MQ=255)
                                                                                                                                                                                                                      cacaTAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCACTTCCGCCATAACACGGCTTAaacc                   <  1:193217/251‑1 (MQ=255)
                                                                                                                                                                                                                      cacaTAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCACTTCCGCCATAACACGGCTTAaac                    >  1:367657/1‑250 (MQ=255)
                                                                                                                                                                                                                        caTAAGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCACTTCCGCCATAACACGGCTTAaaccaa                 >  1:551028/1‑251 (MQ=255)
                                                                                                                                                                                                                            aGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCAc                                           <  1:312842/221‑1 (MQ=255)
                                                                                                                                                                                                                            aGCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCACTTCCGCCATAACACGGCTTAAAccaaccaa             >  1:426839/1‑251 (MQ=255)
                                                                                                                                                                                                                             gCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAAttt                                                                                                                          >  1:433173/1‑141 (MQ=255)
                                                                                                                                                                                                                             gCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACtt                                                     <  1:286104/210‑1 (MQ=255)
                                                                                                                                                                                                                             gCTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCACTTCCGCCATAACACGGCTTAaac                    <  1:643414/243‑1 (MQ=255)
                                                                                                                                                                                                                              cTTTAGCTCTCCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCACTTCCGCCATAACACGGCTTAAACCAACCAAtt           >  1:310979/1‑251 (MQ=255)
                                                                                                                                                                                                                                      ctcCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGcc                                                                                                                                                                                           <  1:131458/67‑1 (MQ=255)
                                                                                                                                                                                                                                      ctcCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACAt                                                                                                     >  1:554807/1‑153 (MQ=255)
                                                                                                                                                                                                                                      ctcCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACg                                                 <  1:465814/205‑1 (MQ=255)
                                                                                                                                                                                                                                       tcCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCACTTCCGCCATAACACGGCTTAAACCAACCAATTCGTTAAAgg  <  1:403174/251‑1 (MQ=255)
                                                                                                                                                                                                                                       tcCTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCACTTCCGCCATAACACGGCTTAAACCAACCAATTCGTTAAAgg  <  1:556163/251‑1 (MQ=255)
                                                                                                                                                                                                                                        ccTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTc                                                                                                          >  1:571567/1‑146 (MQ=255)
                                                                                                                                                                                                                                        ccTGAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATcac                                                             >  1:637498/1‑191 (MQ=255)
                                                                                                                                                                                                                                           gAATTAAATAAAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCACtt                                         <  1:472399/208‑1 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                             
GGTATGCGCAATCCCGGTGCCGCCGATTAATGGCGTTTTTTCCACTGCATCATCTAACGCTTTCACTTTGCCTAAGCAGCGCACACGTTGCAATTCATGTTGCGAATTGACCACCGCCAAACCTGCCGAGTCGTAACCACGATACTCAAGACGATGTAATCCGTTAATTAAAATTTCCGCGATATCACGTTGTGCCACTGCACCGACGATTCCACACATAAGCTTTAGCTCTCCTGAATTAAAT‑AAAAAACGTTTGCGAAAACCACCGCACTTTAAGCACAGATCACCTCTACGCCATGGGCTGCAATACGGTTTTTGCTTTCTTCCGACAACAAACTATCGGTAATTAATACATCAATTTGCTGCCAGGTTAATTCTACATTGGGCATTTTGCGCCCGATTTTTTGTGATTCCACCATCACAATCACTTCACGTGCCACTTCCGCCATAACACGGCTTAAACCAACCAATTCGTTAAAGG  >  1/1460729‑1461209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑