Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP028101	693,938	C→T	pseudogene (890/1244 nt)	C7Y58_03400 ←	IS3 family transposase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP028101	693,938	0	C	T	100.0%	101.0 / NA	42	pseudogene (890/1244 nt)	C7Y58_03400	IS3 family transposase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (29/13);  total (29/13)

ATCTAAACTATTTCCTTTTCTTGACATACTTTGAGTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGCTTTTCTCCTCTTAAATTAAATTCTGTTACATCTGTAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAATCTCTCTTAATATGATTA  >  CP028101/693695‑694025                                                                                                                                                                                                                                                    |                                                                                        aTCTAAACTATTTCCTTTTCTTGACATACTTTGAGTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCTAGTTATGACTGCGCGAAATATCATACGAAACTATAGATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTtct                                                                                   >  1:702695/1‑250 (MQ=255) aTCTAAACTATTTCCTTTTCTTGACATACTTTGAGTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTtct                                                                                   >  1:364502/1‑250 (MQ=25) aTCTAAACTATTTCCTTTTCTTGACATACTTTGAGTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTtct                                                                                   >  2:529935/1‑250 (MQ=25)        cTATTTCCTTTTCTTGACATACTTTGAGTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCttaa                                                                           >  1:307056/1‑251 (MQ=21)        cTATTTCCTTTTCTTGACATACTTTGAGTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCttaa                                                                           >  2:631964/1‑251 (MQ=21)          aTTTCCTTTTCTTGACATACTTTGAGTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCGTAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCttaaat                                                                         >  1:750961/1‑251 (MQ=21)               cTTTTCTTGACATACTTTGAGTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTtaaattaaat                                                                    >  1:869405/1‑251 (MQ=21)                 tttCTTGACATACTTTGAGTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTc                                                                  <  2:648304/251‑1 (MQ=21)                 tttCTTGACATACTTTGAGTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATATTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTc                                                                  <  1:494909/251‑1 (MQ=21)                            aCTTTGAGTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTc                                                                  <  1:458400/240‑1 (MQ=25)                            aCTTTGAGTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTc                                                                  >  2:458400/1‑240 (MQ=25)                                 gAGTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATc                                                         <  1:69225/244‑1 (MQ=25)                                 gAGTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATc                                                         >  2:69225/1‑244 (MQ=25)                                  aGTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAAc                                                  <  1:73741/250‑1 (MQ=25)                                   gTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCa                                                >  1:130298/1‑251 (MQ=21)                                           cttctCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGAt                                        <  2:123400/251‑1 (MQ=21)                                               tctTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTgg                                    >  1:500974/1‑251 (MQ=21)                                                ctTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGa                                   >  2:144479/1‑251 (MQ=21)                                                  ttCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGc                                 <  2:364502/251‑1 (MQ=21)                                                      gTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGc                                 >  1:376658/1‑247 (MQ=18)                                                      gTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGc                                 <  2:376658/247‑1 (MQ=18)                                                        ctttcttGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATAAATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTg                            >  2:907001/1‑250 (MQ=18)                                                          ttcttGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCtt                         >  2:372891/1‑251 (MQ=18)                                                               gATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCaaaa                    >  2:749543/1‑251 (MQ=18)                                                               gATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCaaaa                    >  1:224380/1‑251 (MQ=18)                                                               gATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCAAAATATCATACGAAACTATATATCTGCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCaaaa                    >  1:755467/1‑251 (MQ=16)                                                                    gAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAAtct                 >  2:566973/1‑249 (MQ=17)                                                                    gAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAAtct                 >  1:202005/1‑249 (MQ=17)                                                                    gAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAAtct                 >  2:639825/1‑249 (MQ=17)                                                                    gAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAAtct                 >  1:583429/1‑249 (MQ=17)                                                                      ataatGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAAtctct               >  1:535992/1‑249 (MQ=17)                                                                         atGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAATCTCTCTTaa          >  2:48025/1‑251 (MQ=14)                                                                          tGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGTACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAATCTCTCTTAat         >  2:596995/1‑251 (MQ=14)                                                                          tGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAATCTCTCTTAat         >  2:553352/1‑251 (MQ=14)                                                                          tGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAATCTCTCTTAat         >  2:601584/1‑251 (MQ=14)                                                                          tGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAATCTCTCTTAat         >  1:6185/1‑251 (MQ=14)                                                                          tGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTCGCTTCAAAATCTCTCTTAat         >  1:622708/1‑251 (MQ=14)                                                                            cTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAATCTCTCTTAata        <  1:536439/250‑1 (MQ=14)                                                                            cTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAATCTCTCTTAata        <  2:755467/250‑1 (MQ=14)                                                                            cTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCACTTTCTTTAAATGCTAAATTTATCATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAATCTCTCTTAata        <  1:639825/250‑1 (MQ=9)                                                                               aTACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAATCTCTCTTAATATGAt    <  2:202005/251‑1 (MQ=14)                                                                                 aCTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGTTTTTCTCCTCTTAAATTAAATTCTGTTACATCTATAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAATCTCTCTTAATATGATTa  <  1:453302/251‑1 (MQ=14)                                                                                                                                                                                                                                                    |                                                                                        ATCTAAACTATTTCCTTTTCTTGACATACTTTGAGTTATCTTCTTCTCTTTCAGTCTTTCTTGATATGAATAATGCTGATACTGTCATCCTTGATCACTATGAAATATCAAATTTTCATAGTTTTCATTTTCTTTAAATGCTAAATTTAACATATGATTTATCTGCTCCAAGTTAGGACTGCGCGAAATATCATACGAAACTATATATCTTCCATAAGCATCTAATATTGGAGATAAGTATAGCTTTTCTCCTCTTAAATTAAATTCTGTTACATCTGTAAACCATTTTTGATTTGGAGCTGTTGCTTCAAAATCTCTCTTAATATGATTA  >  CP028101/693695‑694025

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑