Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP028101	1,228,379	0	T	.	43.2%	74.0 / 54.3	37	intergenic (‑122/‑108)	C7Y58_05905/C7Y58_05910	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (11/10);  new base . (8/8);  total (19/18)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.73e-01
Rejected as consensus: Frequency below/above cutoff threshold.

CATTATAAAAATAAGAATTATAATAAAGTTCATTATTTTCCCACTTTATATCAAGTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTTT‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTATGCTATAATTAAAATAAAGAATATTTTTGGAAAGGATTAAAAATATATTATGAATGAAGTAATATTTATTATAATGATGATAGTTTTTTCACTTTTAACTTTTTTAGTTGACATAGTTTTACTTATCAGATTTATTACATTAATAAAACAAATATTCTATAAAGA  >  CP028101/1228143‑1228602                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                  cATTATAAAAATAAAAATTATAATAAAGTTCATTATTTTCCCACTTTATATCAAGTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTACAAAAACATTCACACAAAATACAAAAAAAAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTC‑‑T‑TTTTTTTTTTTTTTTT‑CAAGCACTGTTTGaa                                                                                                                                                                                                                   <  1:568350/250‑1 (MQ=255)               gAATTATAATAAAGTTCATTATTTTCCCACTTTATATCAAGTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTT‑‑CAATCACTGTTTGaaaa                                                                                                                                                                                                                 >  2:37220/1‑239 (MQ=255)               gAATTATAATAAAGTTCATTATTTTCCCACTTTATATCAAGTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAAAAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTT‑‑CAAGCACTGTTTGaaaa                                                                                                                                                                                                                 <  1:37220/239‑1 (MQ=255)                  ttATAATAAAGTTCATTATTTTCCCACTTTATATCAAGTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAATCTCCTCTCATATTACTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTTGTTTTTTTTTTTTTTTT‑TAAACACTGTTTTAAAATATATTT‑aaaaaa                                                                                                                                                                                                   >  1:719593/1‑251 (MQ=255)                  ttATAATAAAGTTCATTATTTTCCCACTTTATATCAAGTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTTT‑CAAGCACTGTTTGaaaactgtcttttatata                                                                                                                                                                                                   >  2:708373/1‑237 (MQ=255)                  ttATAATAAAGTTCATTATTTTCCCACTTTATATCAAGTTTAATACTTCCATTAGGATAACGTTTAAGAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTTT‑CAAGCACTGTTTGaaaa                                                                                                                                                                                                                 <  1:708373/237‑1 (MQ=255)                    ataataAAGTTCATTATTTTCCCACTTTATATCAAGTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTTT‑CAAGCATTATTTGAAATTATATTT‑AAAAAatat                                                                                                                                                                                                >  2:749445/1‑251 (MQ=255)                    ataataAAGTTCATTATTTTCCCACTTTATATCAAGTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTTT‑‑AAGCACTGTTTGaaaa                                                                                                                                                                                                                 >  2:92718/1‑234 (MQ=255)                    ataataAAGTTCATTATTTTCCCACTTTATATCAAGTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTT‑‑CAAGCACTGTTTGaaaa                                                                                                                                                                                                                 <  1:92718/234‑1 (MQ=255)                       ataaAGTTCATTATTTTCCCACTTTATATCAAGTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTT‑‑CAAGCACTGTTTGAAAATATATTT‑AAAAAatatat                                                                                                                                                                                              >  1:55111/1‑249 (MQ=255)                                attattTTCCCACTTTATATCAAGTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTT‑‑‑CAAGCACTGTTTGaaaa                                                                                                                                                                                                                 >  2:17922/1‑221 (MQ=255)                                attattTTCCCACTTTATATCAAGTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTT‑‑‑CAAGCACTGTTTGaaaa                                                                                                                                                                                                                 <  1:17922/221‑1 (MQ=255)                                   attTTCCCACTTTATATCAAGTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTTT‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATTTCTAAATTAAAAat                                                                                                                                                                                 >  2:236801/1‑251 (MQ=255)                                          cACTTTATATCAAGTTTAATTCTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAATCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAAAAATTTATTATAAAATCATCTTTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTTT‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTc                                                                                                                                                                          <  1:236801/251‑1 (MQ=255)                                           aCTTTATATCAAGTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTT‑‑‑‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTAt                                                                                                                                                                      >  1:48473/1‑251 (MQ=255)                                            cTTTATATCAAGTTTAATTATTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTTCAAAAACATTCAAACAAAATACAAAAAATAAAATCAAAAATAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTTT‑CAAGCACTGTTTGAAAat                                                                                                                                                                                                                <  1:354243/212‑1 (MQ=255)                                            cTTTATATCAAGTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTTTTCAAGCACTTTTTGAAAATAAATTT‑AAAAAATATATTTAAAATAAAAATAAtttttt                                                                                                                                                                         >  2:228230/1‑249 (MQ=255)                                                       gTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTTT‑TAAGCAATTTTTGAAAAAATATTT‑AAAAAATATTTTTAAATTAAAAATTATTTTTTTaatataaaatt                                                                                                                                                             >  2:427486/1‑241 (MQ=255)                                                       gTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTTT‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTATGCTATAAtt                                                                                                                                                             >  1:271861/1‑251 (MQ=255)                                                         ttAATACTTCTATTAGAATAAATTTTAAAAAAATCTTCTAGACTTGAAAAAACATTAACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTT‑‑‑‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTATGCTATAATTAAAAt                                                                                                                                                        <  2:466006/251‑1 (MQ=255)                                                               cTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTT‑‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTTTTTTTTTATTCTATAATTAAAATaaaa                                                                                                                                                    >  1:427804/1‑250 (MQ=255)                                                                ttCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TATTTTTTTTTATTTT‑CGAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTATAATAAAAATTTTTTTTTTATGTTATAATTAAAATaaaa                                                                                                                                                    >  1:678953/1‑250 (MQ=255)                                                                              tgtttAAGAAAATCTGCAAGAATTTCAAAAACATTCACAAAAAATACAAAAAATAAAATCAAAATTAAAAAAAACTTTTTCAAAAACTCCCCTCATATTTTTAAAATAATTTATTTTAAAATCATCTTTTCTATTAAA‑GTCTTT‑TTTTTTTTTTTTTTTT‑CAAGCACTGTTTGaaaa                                                                                                                                                                                                                 <  1:716858/175‑1 (MQ=255)                                                                              cTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTT‑‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTTTTATGCTATAATTAAAATAAAGAATATTTTTGGTAAg                                                                                                                                     >  2:222023/1‑251 (MQ=255)                                                                                         aattggtggaatttcAAAAACATTTCCACAAAATACAAAAAAAAAAGAAAAAATTAAAAAAAATTTTTTTATAAAATACATTTATATTTATAAAAAAATTTATAAAAAAAACAAATTTTTAAATATA‑AACATA‑TTTTTTTTTTTTTTTT‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTATGCTATAATTAAAATAAAGAATATTTTTGGAAAGGATTAAAAat                                                                                                                           <  1:28059/237‑1 (MQ=255)                                                                                                 gACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAAAAATCTGTTCTATTATA‑GTC‑AT‑TTTTTTTTTTTTTTTT‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTATGCTATAATTAAAATAAAGAATATTTTTGGAAAGGATTAAAAATATATTatg                                                                                                                   <  1:222023/250‑1 (MQ=255)                                                                                                         aaaaaaTTCAAACAAAATAAAAAAAATAAAGTCAAAATTAAAAAAATATTTTTCATAAACTCTTCTCATATTTCTAAAATAATTTATTATAAAATAATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTTT‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTATGCTATAATTAAAATAAAGAATATTTTTGGAAAGGATTAAAAATATATTATGAATGAAGt                                                                                                           <  2:416591/251‑1 (MQ=255)                                                                                                                 acaaaaaaataaaaaaaaaaaaaataaaaTTAAAAAAATTTTTTTTATAATTTTCTTTTATATTTTTAAAATAATTTTTTAAAAAATAATCTTTTTTATTATAATTTTTT‑TTTTTTTTTTTTTTTT‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTATGCTATAATTAAAATAAAGAATATTTTTGGAAAGGATTAAAAATATATTATGAATGAAGTAAtattt                                                                                                    <  2:719593/226‑1 (MQ=255)                                                                                                                   cacaAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTT‑‑‑‑‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTATGCTATAATTAAAATAAAGAATATTTTTGGAAAGGATTAAAAATATATTATGAATGAAGTAATATTTATTATaa                                                                                             >  1:917/1‑251 (MQ=255)                                                                                                                    aaaaaaaaCAAAAAATAAAATAAAAATTAAAAAAATTTTTTTCATAAACTCCTCTTATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTT‑‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTATGCTATAATTAAAATAAAGAATATTTTTGGAAAGGATTAAAAATATATTATGAATGAAGTAATATTtattat                                                                                               <  1:116778/249‑1 (MQ=255)                                                                                                                       aaaTACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTTT‑CAAGCCCTTTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTTTGCTATAATTAAAATAAAGAATATTTTTGGGAAGGATTAAAAATATATTATGAATGAAGTAATATTTATTATaa                                                                                             >  1:325196/1‑251 (MQ=255)                                                                                                                           aaaaaaaaTAAAGTAAAAATTAAAAAAATCTTTTTTATAAACCCCTTTCATTTTTTAAAAATAATTTATTATAAAATTATCTTTTATATTATA‑GTTGTT‑TTTTTTTTTTTTTTT‑‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTATGCTATAATTAAAATAAAGAATATTTTTGGAAAGGATTAAAAATATATTATGAATGAAGTAATATTTATTATAatgatg                                                                                        <  2:427804/249‑1 (MQ=255)                                                                                                                                                                    ctcctattatatTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GACGTT‑TTTTTTTTTTTTT‑‑‑‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTATGCTATAATTAAAATAAAGAATATTTTTGGAAAGGATTAAAAATATATTATGAATGAAGTAATATTTATTATAATGATGATAGTTTTTTCACTTTTAACTTTTTTAGTTGACATAGTTTTAc                                             <  2:48473/243‑1 (MQ=255)                                                                                                                                                                                 tttAAAATAATTTATTTTAAAATATTCTGTTTTATTTTA‑GTTGTT‑TTTTTTTTTTTTTTTT‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTATGCTATAATTAAAATAAAGAATATTTTTGGAAAGGATTAAAAATATATTATGAATGAAGTAATATTTATTATAATGATGATAGTTTTTTCACTTTTAACTTTTTTAGTTGACATAGTTTTACTTATCAGAtt                                   <  2:325196/249‑1 (MQ=255)                                                                                                                                                                                                 ataAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTTT‑CAAGCACTATTTGAAAAAATATTTTAAAAATTTTTTCTAAA‑TAAAAATTATTTTTTTAAGATATAATTAAAATAAATAATTTTTTTATAAAGGTTTTTAAATTTTTTTTTTATAAAGAAATATTTATTATAATATTTAAAGTTTTTTTAATTTTAACTTTTTTATTTTACTTAGTTTTATTTATTAAATTTTTTACATTAATaaaa                   >  2:832393/1‑251 (MQ=255)                                                                                                                                                                                                   aaaaTCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTT‑‑‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTATGCTATAATTAAAATAAAGAATATTTTTGGAAAGGATTAAAAATATATTATGAATGAAGTAatat                                                                                                      >  1:344393/1‑164 (MQ=255)                                                                                                                                                                                                        aaaaatcatatttattattataatattttttttttttttt‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTATGCTATAATTAAAATAAAGAATATTTTTGGAAAGGATTAAAAATATATTATGAATGAAGTAATATTTATTATAATGATGATAGTTTTTTCACTTTTAACTTTTTTAGTTGACATAGTTTTACTTATCAGATTTATTACATTAATAAAACAAat              <  2:917/226‑1 (MQ=255)                                                                                                                                                                                                             gTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTT‑‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATc                                                                                                                                                                                             <  1:101312/68‑1 (MQ=255)                                                                                                                                                                                                                   aatattgttttt‑tttttttttttttttt‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTATGCTATAATTAAAATAAAGAATATTTTTGGAAAGGATTAAAAATATATTATGAATGAAGTAATATTTATTATAATGATGATAGTTTTTTCACTTTTAACTTTTTTAGTTGACATAGTTTTACTTATCAGATTTATTACATTAATAAAACAAATATTCTATAAAGa  <  2:678953/241‑1 (MQ=255)                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                  CATTATAAAAATAAGAATTATAATAAAGTTCATTATTTTCCCACTTTATATCAAGTTTAATACTTCCATTAGGATAACTTTTAAAAAAATCTGCTGGACTTGCAAAAACATTCACACAAAATACAAAAAATAAAGTCAAAATTAAAAAAATCTTTTTCATAAACTCCTCTCATATTTCTAAAATAATTTATTATAAAATCATCTGTTCTATTATA‑GTCGTT‑TTTTTTTTTTTTTTTT‑CAAGCACTGTTTGAAAATATATTT‑AAAAAATATATCTAAAATAAAAATTATTTTCTTATGCTATAATTAAAATAAAGAATATTTTTGGAAAGGATTAAAAATATATTATGAATGAAGTAATATTTATTATAATGATGATAGTTTTTTCACTTTTAACTTTTTTAGTTGACATAGTTTTACTTATCAGATTTATTACATTAATAAAACAAATATTCTATAAAGA  >  CP028101/1228143‑1228602

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑