| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP028101 | 875,381 | A→G | K85E (AAA→GAA) | C7Y58_04335 → | autotransporter domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP028101 | 875,381 | 0 | A | G | 98.0% | 155.4 / ‑3.6 | 51 | K85E (AAA→GAA) | C7Y58_04335 | autotransporter domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (19/31); total (20/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.94e-01 | |||||||||||
GCAAATGGAGTACCAACAAGAG‑AAGAAATAGCGACATCAAGAGAAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAAAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGATATATGCCTACAAATAGTGAAAATTATTCATTATTGCCTAAAT > CP028101/875273‑875627 | gCAAATGGAGTACCAACAAGAG‑AAGAAATAGCGACATCAAGAGAAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGAAAAATCACCTTGGATGTCATGGCAATTTGGAATATACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGgaga > 1:576470/1‑251 (MQ=14) cAAATGGAGGACCAACAAGAGGAGGAAAT‑GCGACAACAAGAGAAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTGAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCCCCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATaaaggaaaagg < 2:504248/247‑1 (MQ=11) aTGGAGTACCAACAAGAG‑AAGAAATAGCGACATCAAGAGAAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAg > 2:237283/1‑251 (MQ=14) gAGTACCAACAAGAG‑AAGAAATAGCGACATCAAGAGAAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAGGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCa > 2:27188/1‑251 (MQ=14) gAGTACCAACAAGAG‑AAGAAATAGCGACATCAAGAGAAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCa > 1:177107/1‑251 (MQ=14) gAGTACCAACAAGAG‑AAGAAATAGCGACATCAAGAGAAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATAGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGc < 2:190706/250‑1 (MQ=14) aCCAACAAGAG‑AAGAAATCGCGACATCAAGAGAAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCATAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACTTAGGATGTCATGGCAATTTGGAATAAACTATATGTAGAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGaaa > 1:569004/1‑251 (MQ=255) aCCAACAAGAG‑AAGAAATAGCGACATCAAGAGAAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGaaa > 1:459791/1‑251 (MQ=14) aCCAACAAGAG‑AAGAAATAGCGACATCAAGAGAAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGaaa < 2:33953/251‑1 (MQ=14) ccAACAAGAG‑AAGAAATAGCGACATCAAGAGAAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGaaaa < 1:15251/251‑1 (MQ=14) aaGAG‑AAGAAATAGCGACATCAAGAGAAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATc < 1:117951/251‑1 (MQ=14) agag‑AAGAAATAGCGACATCAAGAGAAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATc > 1:147733/1‑250 (MQ=14) cATCAAGAGAAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATAttt < 1:439333/251‑1 (MQ=18) agaAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGTCGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAag < 1:616211/249‑1 (MQ=18) agaAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAGGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAag < 1:27188/249‑1 (MQ=18) aaaTTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCAtt < 2:301204/228‑1 (MQ=14) aaaTTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCAtt > 1:301204/1‑228 (MQ=14) aaaTTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATa > 1:405730/1‑251 (MQ=21) ttAAGAATCTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACaaa < 1:664291/251‑1 (MQ=37) tAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAAt < 2:625340/251‑1 (MQ=37) aaGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGTAGCAAGAGCAGAAAACTCAGCAAGTTTAGCAGGCTTCAGATTCGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAAGTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGTGATACAAAtt < 1:517956/251‑1 (MQ=11) aCTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTAtta > 2:695711/1‑250 (MQ=38) aCTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTGTAGCAGGCTTAAGATTAGAATTAATACAATTAATTGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGTAAAAGGGGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTc < 2:25505/251‑1 (MQ=255) gTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAg > 2:2024/1‑251 (MQ=255) gTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAg > 2:159024/1‑251 (MQ=255) tAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAg < 2:156196/250‑1 (MQ=255) tAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGACCTCGCGGCCTTGTTTTCTTCTCTCTATTTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAg < 1:578150/250‑1 (MQ=14) gAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGTAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAACTAGTAAAATCACGTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGata < 1:620280/250‑1 (MQ=255) gAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGata < 2:576470/250‑1 (MQ=255) aaGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGatata < 2:624492/251‑1 (MQ=255) aaGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGatata < 2:128490/251‑1 (MQ=255) aaGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGatat < 2:106315/250‑1 (MQ=255) tttGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATTCAAATTTATTCAATAGATATATGc < 2:577919/251‑1 (MQ=255) tttGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGATATATg < 1:347765/250‑1 (MQ=255) tttGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGATATATGc < 1:241786/251‑1 (MQ=255) tttGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGATATATGc < 2:147733/251‑1 (MQ=255) tttGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGATATATGc < 2:44323/251‑1 (MQ=255) ttGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGATATATGcc < 2:523440/251‑1 (MQ=255) ttGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGATATATGcc < 1:337326/251‑1 (MQ=255) aTCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAg < 2:83794/237‑1 (MQ=255) aTCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAg > 1:83794/1‑237 (MQ=255) aTCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGata < 1:153657/240‑1 (MQ=255) aTCTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGata > 2:153657/1‑240 (MQ=255) cTAAGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGATATATGCCTACAAAt > 1:432845/1‑251 (MQ=255) aaGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGATATATGCCTACAAATAg > 1:322946/1‑251 (MQ=255) aaGATAGACGAAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGATATATGCCTACAAATAg < 1:184522/251‑1 (MQ=255) gATAGACGCAGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCGGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGATATATGCCTACAAATAGta > 2:219714/1‑250 (MQ=255) aaGCAAGAGCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGATATATGCCTACAAATAGTGCAAattat > 1:653826/1‑251 (MQ=255) agCAGAAAACTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGATATATGCCTACAAATAGTGAAAATTATTCatt < 2:322946/249‑1 (MQ=255) cTCAGAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGATATATGCCTACAAATAGTGAAAATTATTCATTATTGCCTAAAt > 2:519279/1‑251 (MQ=255) cTCAAAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAGAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGATATATGCCTACAAATAGTGAAAATTATTCATTATTGCCTAAAt > 2:216897/1‑251 (MQ=255) | GCAAATGGAGTACCAACAAGAG‑AAGAAATAGCGACATCAAGAGAAAATTTAAGAAACTCAGTAGGAAGTTTGCAATCTAAGATAGACGAAGCAAGAGCAGAAAACTCAAAAAGTTTAGCAGGCTTAAGATTAGAATTAATACAATTAATGGAACAAGGGGATCAAGTAGTAAAATCACCTTGGATGTCATGGCAATTTGGAATAAACTATATGTACAGTAAATGGAATGGTACATATAAAGGAAAAGGAGATAAGGCAGAAAAATATCCATTTGAAGGAATATTTACAAGAGATACAAATTTATTCAATAGATATATGCCTACAAATAGTGAAAATTATTCATTATTGCCTAAAT > CP028101/875273‑875627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |