New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP028101	= 1538202	40 (0.280)	4 (0.030)	4/424	3.6	6.8%	coding (1082/1995 nt)	aroB	bifunctional 3‑dehydroquinate synthase/phosphatase
	?	CP028101	= 1539472	72 (0.530)					coding (692/774 nt)	C7Y58_07385	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGTTCTTTCAATAGCTTCTTCTTTTAAAAATTTATTTTTATTTACATCTTCCCCAAGTTTAACTATTTCTAAATCCTTATAAATTTCTTTTTTAAAAGTAATATTTTCATTATCTTTTTCAACTTCTGCAATTAATAAACGACAAGAATTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP028101/1538051‑1538202 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaattagGAGTATGGTATTCATTAAAAGGAAAAGCTGAACTTATTACACCTGAATGGGACTTTTCTATAAATCAATTAAGAAGTTTTTAAAAATACAAACAGAGGTTAAAATTATAGCCTCTGTTTTTTTGTTTCTATAAAATATGATATAATATACTAAAT  <  CP028101/1539472‑1539318                                                                                                                                                                                                                                                                                                                     AGTTCTTTCAATAGCTTCTTCTTTTAAAAATTTATTTTTATTTACATCTTCCCCAAGTTTAACTATTTCTAAATCCTTATAAATTTCTTTTTTAAAAGTAATATTTTCATTATCTTTTTCAACTTCTGCAATTAATAAACGACAAGAATTAGGAGTATGGTATTCATTAAAAGGAAAAGCTGAACTTATTACACCTGAATGGGACTTTTCTATAAATCAATTAAGAAGTTTTTAAAAATACAAACAGAGGT                                                          >  1:296497/1‑251           ATAGCTTCTTCTTTTAAAAATTTATTTTTATTTACATCTTCCCCAAGTTTAACTATTTCTAAATCCTTATAAATTTCTTTTTTAAAAGTAATATTTTCATTATCTTTTTCAACTTCTGCAATTAATAAACGACAAGAATTAGGAGTATGGTATTCATTAAAAGGAAAAGCTGAACTTATTACACCTGAATGGGACTTTTCTATAAATCAATTAAGAAGTTTTTAAAAATACAAAC                                                                <  1:52221/235‑1           ATAGCTTCTTCTTTTAAAAATTTATTTTTATTTACATCTTCCCCAAGTTTAACTATTTCTAAATCCTTATAAATTTCTTTTTTAAAAGTAATATTTTCATTATCTTTTTCAACTTCTGCAATTAATAAACGACAAGAATTAGGAGTATGGTATTCATTAAAAGGAAAAGCTGAACTTATTACACCTGAATGGGACTTTTCTATAAATCAATTAAGAAGTTTTTAAAAATACAAAC                                                                >  2:52221/1‑235                                                          TTTAACTATTTCTAAATCCTTATAAATTTCTTTTTTAAAAGTAATATTTTCATTATCTTTTTCAACTTCTGCAATTAATAAACGACAAGAATTAGGAGTATGGTATTCATTAAAAGGAAAAGCTGAACTTATTACACCTGAATGGGACTTTTCTATAAATCAATTAAGAAGTTTTTAAAAATACAAACAGAGGTTAAAATTATAGCCTCTGTTTTTTTGTTTCTATAAAATATGATATAATATACTAAAT  <  2:296497/250‑1                                                                                                                                                                                                                                                                                                                     AGTTCTTTCAATAGCTTCTTCTTTTAAAAATTTATTTTTATTTACATCTTCCCCAAGTTTAACTATTTCTAAATCCTTATAAATTTCTTTTTTAAAAGTAATATTTTCATTATCTTTTTCAACTTCTGCAATTAATAAACGACAAGAATTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP028101/1538051‑1538202 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaattagGAGTATGGTATTCATTAAAAGGAAAAGCTGAACTTATTACACCTGAATGGGACTTTTCTATAAATCAATTAAGAAGTTTTTAAAAATACAAACAGAGGTTAAAATTATAGCCTCTGTTTTTTTGTTTCTATAAAATATGATATAATATACTAAAT  <  CP028101/1539472‑1539318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.