New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP028101	= 332833	NA (NA)	28 (0.210)	20/426	1.7	NA	noncoding (2300/2928 nt)	C7Y58_01745	23S ribosomal RNA
	?	CP028101	= 332842	NA (NA)					noncoding (2291/2928 nt)	C7Y58_01745	23S ribosomal RNA

GGGTAGCTTTTATCCGTTGAGCGACGACCCTTCCATTCGGAATCGCCGGATCACTATGTCCTGCTTTCGCATCTGCTCGACCCGTCAGTCTTGCAGTCAAGCTCTCTTATGCCATTGCACTCTATGGTTGATTTCCATCCAACCTGAGAGAACCTTTGAACGCCTCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP028101/332666‑332833 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcctccgAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAACAGGCTGATCCTACCCGAGAGTCCATATCGACGGTAGGGTTTGGCAC  <  CP028101/332842‑332610                                                                                                                                                                                                                                                                                                                                                                                                                   GGGTAGCTTTTATCCGTTGAGCGACGACCCTTCCATTCGGAATCGCCGGATCACTATGTCCTGCTTTCGCATCTGCTCGACCCGTCAGTCTTGCAGTCAAGCTCTCTTATGCCATTGCACTCTATGGTTGATTTCCATCCAACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGGTCTCTCAGGATGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGA                                                                                                                                                          >  1:191464/1‑249                                                     ACTATGTCCTGCTTTCGCATCTGCTCGACCCGTCAGTCTTGCAGTCAAGCTCTCTTATGCCATTGCACTCTATGGCCGCCTTCCATCCAACCTGAGAGACCCTTTGAACGCCTCCGAAAGCGTAACGGACACTTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGACCTTGACTGCCAGACTGACGGGTCGAGCAGATGCGCAAGAAGGACATAGTGATCAGGCGg                                                                                                    >  2:189989/1‑250                                                          GTCCTGCTTTCGCATCTGCTCGACCCGTCAGTCTTGCAGTCAAGCTCTCTTATGCCATTGCACTCTATGGTTGATTTCCATCCAACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGGTGGCTGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGGCGATGCGAAAGCAGGACATAGGGATCCGGCGATTCCG                                                                                               >  2:188571/1‑251                                                          GTCCTGCTTTCGCATCTGCTCGACCCGTCAGTCTTGCAGTCAAGCTCTCTTATGCCATTGCACTCTATGGTTGATTTCCATCCAACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGATCTCTCAGGTTGGATGGAAATCAACCATAGAGAGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATACGAAAGCAGGACACAGTGATCCGGCGATTCCG                                                                                               >  1:190873/1‑251                                                                                                      CTCTCTTATGCCATTGCACTCTATGGTTGATTTCCATCCAACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGG                                                     <  1:188571/249‑1                                                                                                        CTCTTATGCCATTGCACTCTATGGTTGATTTCCATCCAACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAA                                                 >  1:212859/1‑251                                                                                                        CTCTTATGCCATTGCACTCTATGGTTGATTTCCATCCAACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGATCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAA                                                 >  2:266970/1‑251                                                                                                                CCATTGCACTCTATGGTTGATTTCCATCCAACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAG                                                                <  1:675724/228‑1                                                                                                                          CTATGGTTGATTTCCATCCAACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAACAGGCTGCTCCTACCCG                                >  2:310098/1‑250                                                                                                                          CTATGGTTGATTTCCATCCAACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAAC                                                <  1:182874/234‑1                                                                                                                          CTATGGTTGATTTCCATCCAACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGAAAAC                                                >  2:182874/1‑234                                                                                                                          CTATGGTTGATTTCCATCCAACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGCTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAACAGGCTGGTCCTACCCGA                               >  2:410506/1‑251                                                                                                                           TATGGTTGATTTCCATCCAACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAACAGGCTGATCCTACCCGAG                              <  1:310098/251‑1                                                                                                                               GTTGATTTCCATCCAACCTGAGAGAACCTTTGAACGCCTCCGACAGAGTGACGGAGGCGATCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCC                                                          <  1:543080/219‑1                                                                                                                                TTGATTTCCATCCAACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAACAGGCTGATCCTACCCGAGAGTCC                         <  2:212859/251‑1                                                                                                                                              ACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAACAGGCTGATCCTACCCGCGAGTCCATATCGACGGTAGG           >  1:628687/1‑251                                                                                                                                              ACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAACAGGCTGATCCTACCCGAGAGTCCATATCGACGGTAGG           >  1:455979/1‑251                                                                                                                                              ACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAACAGGCTGATCCTACCCGAGAGTCCATATC                    >  2:515372/1‑242                                                                                                                                              ACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGAGTCGTCGCTCAACGGTTAAAAGCTACCCCCGGGATAACAGGCTGATCCTACCCGAGAGTCCATATCGACGGTAGG           >  1:562537/1‑251                                                                                                                                              ACCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGCTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAACAGGCTGATCCTACCCGAGAGTCCATATC                    <  1:515372/242‑1                                                                                                                                               CCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAACAGGCTGATCCTACCCGAGAGTCCATATCGACGGTAGGG          <  2:455979/251‑1                                                                                                                                               CCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAACAGGCTGATCCTACCCGAGAGTCCATATC                    >  1:300789/1‑241                                                                                                                                               CCTGAGAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAACAGGCTGATCCTACCCGAGAGTCCATATC                    <  2:300789/241‑1                                                                                                                                                    GAGAACCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAACAGGCTGATCCTACCCGAGAGTCCATATCGACGGTCGGGTTTGG     >  2:151528/1‑251                                                                                                                                                       AACCTTGGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAACAGGCTGATCCTACCCGAGAGTCCATATCGACGGTAGGGTTTGGCAC  <  2:628687/251‑1                                                                                                                                                         CCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGC                                                               <  1:418919/188‑1                                                                                                                                                         CCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGC                                                               >  2:418919/1‑188                                                                                                                                                         CCTTTGAACGCCTCCGAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATA                                                                    <  1:334576/183‑1                                                                                                                                                                                                                                                                                                                                                                                                                   GGGTAGCTTTTATCCGTTGAGCGACGACCCTTCCATTCGGAATCGCCGGATCACTATGTCCTGCTTTCGCATCTGCTCGACCCGTCAGTCTTGCAGTCAAGCTCTCTTATGCCATTGCACTCTATGGTTGATTTCCATCCAACCTGAGAGAACCTTTGAACGCCTCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP028101/332666‑332833 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcctccgAAAGAGTAACGGAGGCGTTCAAAGGTTCTCTCAGGTTGGATGGAAATCAACCATAGAGTGCAATGGCATAAGAGAGCTTGACTGCAAGACTGACGGGTCGAGCAGATGCGAAAGCAGGACATAGTGATCCGGCGATTCCGAATGGAAGGGTCGTCGCTCAACGGATAAAAGCTACCCTGGGGATAACAGGCTGATCCTACCCGAGAGTCCATATCGACGGTAGGGTTTGGCAC  <  CP028101/332842‑332610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.