| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP028101 | 14634 = | NA (NA) | 6 (0.040) | 6/432 | 3.2 | NA | coding (278/1482 nt) | C7Y58_00080 | IS1182‑like element ISFnu1 family transposase |
| ? | CP028101 | 15120 = | NA (NA) | coding (764/1482 nt) | C7Y58_00080 | IS1182‑like element ISFnu1 family transposase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TCTCACTTAATTTAAAAAGTTTTTCCACAAATTGACAAAACAATTCATAGATGATATCACTAGCCTTTGAAAGAAAGCGAGAAATAGTTGAATAACTAGGAACATTAAGCGAATTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP028101/14750‑14634‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atttaTGAGAATGAAGGAAGATTACATGCGCAATGGACAATTAAAACCAGGGTATAATCTTCAGATTGGTGTAATTAGCGAATATATTGCTTCCTATGAAATTTTCCATAATCCAGCAGATACAAAAACTTTAATTCCATTTCTTGAAAAAACAAAATCTCAAAATATAGAAATCAAGAATGTAGTAGCAGATGCAGGATATGAAAGTTTTCCTAATTATGAATAT > CP028101/15120‑15340 TCTCACTTAATTTAAAAAGTTTTTCCACAAATTGACAAAACAATTCATAGATGATATCACTAGCCTTTGAAAGAAAGCGAGAAATAGTTGAATAACTAGGAACATTAAGCGAATTTATGAGAATGAAGGAAGATTACATGCGCAATGGACAATTAAAACCAGGGTATAATCTTCAGATTGGTGTAATTAGCGAATATCTTGCTTCCTATGATATTTTCCATAATCCAGCAGATACAAAAACTTTAATTCCA > 1:515419/1‑251 TTAAAAAGTTTTTCCACAAATTGACAAAACAATTCATAGATGATATCACTAGCCTTTGAAAGAAAGCGAGAAATAGTTGAATAACTAGGAACATTAAGCGAATTTATGAGAATGAAGGAAGATTACATGCGCAATGGACAATTAAAACCAGGGTATAATCTTCAGATTGGTGTAATTAGCGAATATATTGCTTCCTATGATATTTTCCATAATCCAGCAGATACAAAAACTTTAATTCCATTTCTTGAAAA > 2:698222/1‑251 CAATTCATAGATGATATCACTAGCCTTTGAAAGAAAGCGAGAAATAGTTGAATAACTAGGAACATTAAGCGAATTTATGAGAATGAAGGAAGATTACATGCGCAATGGACAATTAAAACCAGGGTATAATCTTCAAATTGGTGTAATTAGCGAATATATTGCTTCCTATGAAATTTTCCATAATCCAGCAGATACAAAAACTTTAATTCCATTTCTTGAAAAAACAAAATCTCAAAATATAGAAATCAAGA > 1:46742/1‑251 ATAGATGATATCACTAGCCTTTGAAAGAAAGCGAGAAATAGTTGAATAACTAGGAACATTAAGCGAATTTATGAGAATGAAGTAAGATTACATGCGCAATGGACAATTAAAACCAGGGTATAATCTTCAGATTGGTGTAATTAGCGAATATATTGCTTCCTATGATATTTTCCATAATCCAGCAGATACAAAAACTTTAATTCCATTTCTTGAAAAAACAAAATCTCAAAATATAGAAATCAAGAATGTAG < 2:515419/251‑1 AAAGAAAGCGAGAAATAGTTGAATAACTAGGAACATTAAGCGAATTTATGAGAATGAAGGAAGATTACATGCGCAATGGACAATTAAAACCAGGGTATAATCTTCAGATTGGTGTAATTAGCGAATATATTGCTTCCTATGATATTTTCCATAATCCAGCAGATACAAAAACTTTAATTCCATTTCTTGAAAAAACAAAATCTCAAAATATAGAAATCAAGAATGTAGTAGCAGATGCAGGACATGAAAG < 1:698222/250‑1 TTGAATAACTAGGAACATTAAGCGAATTTATGAGAATGAAGGAAGATTACATGCGCAATGGACAATTAAAACCAGGGTATAATCTTCAAATTGGTGTAATTAGCGAATATATTGCTTCCTATGAAATTTTCCATAATCCAGCAGATACAAAAACTTTAATTCCATTTCTTGAAAAAACAAAATCTCAAAATATAGAAATCAAGAATGTAGTAGCAGATGCAGGATATGAAAGTTTTCCTAATTATGAATAT < 2:46742/251‑1 TCTCACTTAATTTAAAAAGTTTTTCCACAAATTGACAAAACAATTCATAGATGATATCACTAGCCTTTGAAAGAAAGCGAGAAATAGTTGAATAACTAGGAACATTAAGCGAATTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP028101/14750‑14634‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atttaTGAGAATGAAGGAAGATTACATGCGCAATGGACAATTAAAACCAGGGTATAATCTTCAGATTGGTGTAATTAGCGAATATATTGCTTCCTATGAAATTTTCCATAATCCAGCAGATACAAAAACTTTAATTCCATTTCTTGAAAAAACAAAATCTCAAAATATAGAAATCAAGAATGTAGTAGCAGATGCAGGATATGAAAGTTTTCCTAATTATGAATAT > CP028101/15120‑15340 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |