Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP028101158,5380CG28.2% 390.6 / 83.8 215G89R (GGT→CGT) ‡C7Y58_00820YebC/PmpR family DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base C (40/100);  new base G (55/0);  total (115/100)
Fisher's exact test for biased strand distribution p-value = 6.58e-23
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 218 total aligned reads displayed.

CTTTTTTCTTAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTGGATCTCCTCCAC  >  CP028101/158391‑158687
                                                                                                                                                   |                                                                                                                                                     
cTTTTTTCTTAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTGCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCtt                                                                                                                                                     <  1:192095/150‑1 (MQ=255)
  tttttCTTAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCAGTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGTTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACATTCa                                                                                                                                                   >  1:2382296/1‑150 (MQ=255)
    tttCTTAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCata                                                                                                                                                 <  1:1849208/150‑1 (MQ=255)
     ttCTTAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTCATAAGGTTCatat                                                                                                                                                >  1:2432082/1‑150 (MQ=255)
      tCTTAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATAtc                                                                                                                                               <  1:1806152/150‑1 (MQ=255)
         tAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTCATAGGTTTCATATCTCa                                                                                                                                            >  1:14967/1‑150 (MQ=255)
         tAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCTATAGTCTTCATATCTCa                                                                                                                                            >  1:2793028/1‑150 (MQ=255)
         tAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATCTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCGGGTCCATAGTGTTCATATCTCa                                                                                                                                            >  1:2766270/1‑150 (MQ=255)
          aaaCATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCAt                                                                                                                                           >  1:525543/1‑150 (MQ=255)
           aaCATCCGAGATACTGCTCCATCTGCTCCAATATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCATTTACTGCTTCAACTATAAATGCTGTTCCAGCAGGTCCATAACCTTCATATCTCAtt                                                                                                                                          <  1:3319759/150‑1 (MQ=255)
                ccAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTCATGGCGTTCATATCTCATTTCTGt                                                                                                                                     >  1:1357284/1‑150 (MQ=255)
                ccAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGt                                                                                                                                     <  1:1503382/150‑1 (MQ=255)
                ccAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGt                                                                                                                                     <  1:2695799/150‑1 (MQ=255)
                 caggATACTGCTCTATCTGCTCTAAAATTTCCATCTTTACGAGTGAGAGTCATCCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAATGCTGTTCCAGCAGGTTCATAACCTTCATATCTCATTTCTgga                                                                                                                                    <  1:3251273/147‑3 (MQ=255)
                   aGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTaaa                                                                                                                                  <  1:2946042/150‑1 (MQ=255)
                    gATACTGCTCCATTTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTaaaa                                                                                                                                 <  1:2036193/150‑1 (MQ=255)
                     aTACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAAt                                                                                                                                <  1:3369261/150‑1 (MQ=255)
                        cTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTa                                                                                                                             <  1:100709/150‑1 (MQ=255)
                         tGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTac                                                                                                                            <  1:621355/150‑1 (MQ=255)
                          gCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTCATGAGGTTCATATCTCATTTCTGTAAAATCTaca                                                                                                                           >  1:466905/1‑150 (MQ=255)
                                    cTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTCATAACGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAAtt                                                                                                                 >  1:2488688/1‑150 (MQ=255)
                                        aaGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCTATAGCCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTcc                                                                                                             >  1:1376851/1‑150 (MQ=255)
                                        aaGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAGCGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTcc                                                                                                             >  1:1009452/1‑150 (MQ=255)
                                           aTTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACGATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATCTCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGa                                                                                                          <  1:3007329/150‑1 (MQ=255)
                                             ttCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAGCGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAAc                                                                                                        >  1:1234520/1‑150 (MQ=255)
                                             ttCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAAc                                                                                                        >  1:1373999/1‑150 (MQ=255)
                                             ttCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAAc                                                                                                        <  1:1660109/150‑1 (MQ=255)
                                             ttCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAAc                                                                                                        <  1:2141554/150‑1 (MQ=255)
                                               ccATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAGCCTTCATATCTCATTTCTGTAAAATTTACACCCTCTAATTCTCCAGAACCt                                                                                                      >  1:1731050/1‑150 (MQ=255)
                                               ccATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCt                                                                                                      >  1:1731045/1‑150 (MQ=255)
                                               ccATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCt                                                                                                      >  1:1731047/1‑150 (MQ=255)
                                                    tttACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCTATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCtttttt                                                                                                 >  1:1527454/1‑150 (MQ=255)
                                                     ttACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCTATGGCGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCttttttt                                                                                                >  1:763733/1‑150 (MQ=255)
                                                     ttACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCttttttt                                                                                                <  1:1986148/150‑1 (MQ=255)
                                                      tACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAATGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTa                                                                                               >  1:1031281/1‑150 (MQ=255)
                                                        cGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTAtt                                                                                             <  1:895016/150‑1 (MQ=255)
                                                          aGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGTAGGTTTATAGTCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGc                                                                                           >  1:950744/1‑150 (MQ=255)
                                                            tGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGTAGGTCTATAGTGTTCATATCTCATTTCTGTAAAATTTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGctc                                                                                         >  1:2287118/1‑150 (MQ=255)
                                                             gAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCTATGAGGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGctct                                                                                        >  1:1228785/1‑150 (MQ=255)
                                                             gAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCTATAGTCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGctct                                                                                        >  1:654147/1‑150 (MQ=255)
                                                              aaaGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTTATAGTCTTCATATCTCCTTTCTGTAAACTCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCtt                                                                                       >  1:1987620/1‑150 (MQ=255)
                                                              aaaGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCtt                                                                                       <  1:285920/150‑1 (MQ=255)
                                                               aaGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTCGTGGGTTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCttt                                                                                      >  1:1772813/1‑150 (MQ=255)
                                                               aaGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCttt                                                                                      <  1:1176846/150‑1 (MQ=255)
                                                                aGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTc                                                                                     <  1:2385181/150‑1 (MQ=255)
                                                                 gTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCt                                                                                    <  1:864474/150‑1 (MQ=255)
                                                                  tCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTa                                                                                   <  1:1572989/150‑1 (MQ=255)
                                                                    aTTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAg                                                                                 <  1:773650/150‑1 (MQ=255)
                                                                     ttCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAAGGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTCTTGCTCTTTCTCAGa                                                                                >  1:3385470/1‑150 (MQ=255)
                                                                       ctcATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGata                                                                              <  1:1573233/150‑1 (MQ=255)
                                                                          aTTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACTTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCt                                                                           >  1:2852237/1‑150 (MQ=255)
                                                                               tGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCTGTAGGGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTTTAAGATATCTTTTgg                                                                      >  1:2270508/1‑150 (MQ=255)
                                                                               tGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCTATGGTGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTgg                                                                      >  1:949043/1‑150 (MQ=255)
                                                                               tGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAGCCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTgg                                                                      >  1:2195810/1‑150 (MQ=255)
                                                                               tGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTgg                                                                      <  1:2417609/150‑1 (MQ=255)
                                                                                 aaGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCa                                                                    <  1:3293317/150‑1 (MQ=255)
                                                                                      gTTCTCTTTTTCTTCTCAGTTACTTCTTCAACTATCAAGGCTGTTTCCGCATGTTCATGAGACTCATATCTCATTTCTGTAAAATCTCCACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTTTTTTTCAGATAGCTTTTGGCATAttt                                                               >  1:252577/1‑150 (MQ=255)
                                                                                      gTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTCATAGGGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATAttt                                                               >  1:1419153/1‑150 (MQ=255)
                                                                                          tATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCTATGGTGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAg                                                           >  1:170673/1‑150 (MQ=255)
                                                                                               ttattaTCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAgctttt                                                      <  1:676329/150‑1 (MQ=255)
                                                                                               ttattaTCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAgctttt                                                      <  1:918258/150‑1 (MQ=255)
                                                                                                  ttatCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAgcttttgct                                                   <  1:341349/150‑1 (MQ=255)
                                                                                                  ttatCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAgcttttgct                                                   <  1:2090119/150‑1 (MQ=255)
                                                                                                    atCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAgcttttgcttt                                                 <  1:1432175/150‑1 (MQ=255)
                                                                                                       aGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTTATAGGTTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTc                                              >  1:2662380/1‑150 (MQ=255)
                                                                                                       aGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTc                                              <  1:1345095/150‑1 (MQ=255)
                                                                                                       aGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTc                                              <  1:1615354/150‑1 (MQ=255)
                                                                                                       aGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTc                                              <  1:2358266/150‑1 (MQ=255)
                                                                                                        gTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCt                                             <  1:1232999/150‑1 (MQ=255)
                                                                                                        gTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCt                                             <  1:368496/150‑1 (MQ=255)
                                                                                                          tACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTAt                                           <  1:3158824/150‑1 (MQ=255)
                                                                                                           aCTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTCATGGGGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTAtt                                          >  1:1320767/1‑150 (MQ=255)
                                                                                                           aCTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTAtt                                          <  1:2469116/150‑1 (MQ=255)
                                                                                                            cTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCGGTGAGGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTg                                         >  1:3376146/1‑150 (MQ=255)
                                                                                                              gCTTCAACTATAAAGGCTGTTCCAGCAGGTTTATGGTCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCa                                       >  1:2172699/1‑150 (MQ=255)
                                                                                                              gCTTCAACTATAAAGGCTGTTCCAGCAGGTTTATAGGTTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCa                                       >  1:63848/1‑150 (MQ=255)
                                                                                                              gCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAGGCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGCTATCTTTTGGCATATTTCCCGCTTTTGCTTTTTCTATTGCa                                       >  1:1473573/1‑150 (MQ=255)
                                                                                                                ttCAACTATAAAGGCTGTTCCAGCAGGTCTATGAGTTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCCTTTGCTTTTTCTATTGCaag                                     >  1:670239/1‑150 (MQ=255)
                                                                                                                ttCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCaag                                     <  1:80240/150‑1 (MQ=255)
                                                                                                                     cTATAAAGGCTGTTCCAGCAGGTCTATGGTGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCaagtctaa                                >  1:281947/1‑150 (MQ=255)
                                                                                                                     cTATAAAGGCTGTTCCAGCAGGTCTATGGGGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCaagtctaa                                >  1:1336054/1‑150 (MQ=255)
                                                                                                                      tataAAGGCTGTTCCAGCAGGTGCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCaagtctaag                               >  1:398652/1‑150 (MQ=255)
                                                                                                                       ataAAGGCTGTTCCAGCAGGTTCATAGTCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCaagtctaagt                              >  1:3147590/1‑150 (MQ=255)
                                                                                                                       ataAAGGCTGTTCCAGCAGGTGCATAGAGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCaagtctaagt                              >  1:3147586/1‑150 (MQ=255)
                                                                                                                       ataAAGGCTGTTCCAGCAGGTCCATAAGGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGTaagtctaagt                              >  1:1984165/1‑150 (MQ=255)
                                                                                                                       ataAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCaagtctaagt                              >  1:2068526/1‑150 (MQ=255)
                                                                                                                            ggCTGTTCCAGCAGGTTCATAACTTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTgg                         >  1:1179748/1‑150 (MQ=255)
                                                                                                                            ggCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTgg                         <  1:1590862/150‑1 (MQ=255)
                                                                                                                              cTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGt                       <  1:1241435/150‑1 (MQ=255)
                                                                                                                                   ccAGCAGTTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTAGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAg                  <  1:2215189/150‑1 (MQ=255)
                                                                                                                                       cagGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTg              <  1:1032488/150‑1 (MQ=255)
                                                                                                                                       cagGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTg              <  1:2904276/150‑1 (MQ=255)
                                                                                                                                        agGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTgg             <  1:2958555/150‑1 (MQ=255)
                                                                                                                                        agGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTgg             <  1:1944681/150‑1 (MQ=255)
                                                                                                                                        agGTCCATAACCTGCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTgg             <  1:2742385/150‑1 (MQ=255)
                                                                                                                                         ggTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTGGa            <  1:1254655/150‑1 (MQ=255)
                                                                                                                                           tCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTGGAtc          <  1:3308312/150‑1 (MQ=255)
                                                                                                                                            ccATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTGGAtct         <  1:2750917/150‑1 (MQ=255)
                                                                                                                                              aTAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGTTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTGGATctcc       <  1:2228157/150‑1 (MQ=255)
                                                                                                                                                  ccTTCCTACCTCACTTCCGTAAAATCCACACCCTCTAATTCCCCAGAACCTCTTTTTATTACTCTTTCCAAGATACCTTTTGTCACATTTCCCAATTTTGCTCTTTTTATTGCAAGTCTAAGTCTTGGGTTGGAGTTTGGATTtcctccc   >  1:3252812/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
CTTTTTTCTTAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTGGATCTCCTCCAC  >  CP028101/158391‑158687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑