| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP028101 | 1,012,551 | G→C | G350R (GGG→CGG) | C7Y58_04950 → | DUF2194 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP028101 | 1,012,551 | 0 | G | C | 99.8% | 1854.0 / NA | 493 | G350R (GGG→CGG) | C7Y58_04950 | DUF2194 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (211/281); minor base A (1/0); total (212/281) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 497 total aligned reads displayed.
AAATAGCAAAACAAAGAAATTTAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTGGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCAGTTATTGAAGTATGTAAAAAAAAT > CP028101/1012405‑1012696 | aaTAGCAAAACAAAGAAATTTAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGa > 1:658766/1‑150 (MQ=255) aTAGCAAAACAAAGAAATTTAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGaa < 1:3284735/150‑1 (MQ=255) tAGCAAAACAAAGAAATTTAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGaaa > 1:2899085/1‑150 (MQ=255) gCAAAACAAAGAAATTTAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATa > 2:1385463/1‑150 (MQ=255) gCAAAACAAAGAAATTTAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATa < 1:2495090/150‑1 (MQ=255) gCAAAACAAAGAAATTTAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATa > 1:3489879/1‑150 (MQ=255) gCAAAACAAAGAAATTTAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGAAATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATa > 1:1650679/1‑150 (MQ=255) cAAAACAAAGAAATTTAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAg < 1:846555/150‑1 (MQ=255) aaaaCAAAGAAATTTAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAgg > 2:1812856/1‑150 (MQ=255) aaCAAAGAAATTTAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGaa < 2:1052363/150‑1 (MQ=255) cAAAGAAATTTAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAAtt > 2:2247236/1‑150 (MQ=255) aaTTTAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGc < 1:3563784/150‑1 (MQ=255) aTTTAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCt < 1:3259360/150‑1 (MQ=255) aTTTAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTAGGGAAATAGGAATTCATGGCt > 1:2335545/1‑150 (MQ=255) tAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACa < 2:3074247/150‑1 (MQ=255) atatatTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAAt < 2:3340834/150‑1 (MQ=255) tatatTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATc > 2:2724874/1‑150 (MQ=255) ttCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATaa < 1:2102427/150‑1 (MQ=255) ttCTGGATTTATGATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCGAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATaa < 2:3561246/150‑1 (MQ=255) gATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCAt > 1:75014/1‑150 (MQ=255) aTTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCAtt < 1:2950178/150‑1 (MQ=255) aTTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCAtt < 1:244463/150‑1 (MQ=255) ttattattaTAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAg < 1:1702369/150‑1 (MQ=255) ttattattaTAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAg < 1:2927214/150‑1 (MQ=255) ttattattaTAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAg < 2:3511307/150‑1 (MQ=255) tattattatAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGt < 1:1123643/150‑1 (MQ=255) attatAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTAttt < 2:2637489/150‑1 (MQ=255) ttatAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTg > 1:891098/1‑150 (MQ=255) gACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGga < 1:1016267/150‑1 (MQ=255) aCTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGgag > 1:2540176/1‑150 (MQ=255) cTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGgaga > 2:893989/1‑150 (MQ=255) cTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGgaga > 2:3409596/1‑150 (MQ=255) tACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGat < 2:1663130/150‑1 (MQ=255) tACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGat < 1:1416559/150‑1 (MQ=255) cAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGatat < 2:1529743/150‑1 (MQ=255) cAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGatat > 2:3000929/1‑150 (MQ=255) cAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGatat > 1:2239186/1‑150 (MQ=255) cAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGatac > 1:3095775/1‑149 (MQ=255) aaTGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATAtt < 2:131685/150‑1 (MQ=255) tgatgCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGa < 2:1029358/150‑1 (MQ=255) gCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGAtttt < 1:1976256/150‑1 (MQ=255) tGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTcc > 2:3238300/1‑150 (MQ=255) tGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTcc < 1:1224754/150‑1 (MQ=255) tGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTcc < 2:2133588/150‑1 (MQ=255) taataaAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGc > 2:370528/1‑150 (MQ=255) ataaAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCtt > 1:253971/1‑150 (MQ=255) ataaAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCtt < 2:1167147/150‑1 (MQ=255) taaAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCttt > 1:2381360/1‑150 (MQ=255) taaAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATACTGATTTTCCAGCttt > 2:1207034/1‑150 (MQ=255) agaTATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTttatctta > 2:2058481/1‑150 (MQ=255) gaTATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTttatcttat > 2:1890997/1‑150 (MQ=255) atatGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTttatcttatc < 1:2715076/150‑1 (MQ=255) tatGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTatca > 1:3161364/1‑150 (MQ=255) tatGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTatca > 2:2232298/1‑150 (MQ=255) gAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATcc > 2:2447805/1‑150 (MQ=255) gAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATcc > 2:1110322/1‑150 (MQ=255) gAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTgg < 1:1394543/150‑1 (MQ=255) ctcACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAg > 1:42527/1‑150 (MQ=255) ctcACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAg > 2:2187815/1‑150 (MQ=255) ctcACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATCTTTACATGGTCGGGAAATAGGAATTCATGGCTACCATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAg > 1:2082088/1‑150 (MQ=255) cacaAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTg > 1:1833252/1‑150 (MQ=255) cacaAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTg < 1:221701/150‑1 (MQ=255) acaAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTga < 1:2752182/150‑1 (MQ=255) caAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTgaa < 1:1589514/150‑1 (MQ=255) caAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTAGTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGAGATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTgaa < 2:2790135/150‑1 (MQ=255) caAATAACAGTAAAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTgaa < 2:3201749/150‑1 (MQ=255) aaaTAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTgaag < 1:1913417/150‑1 (MQ=255) aaaTAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTgaag < 2:157129/150‑1 (MQ=255) aaaTAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTgaag < 2:291082/150‑1 (MQ=255) aCATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGat > 1:2840377/1‑150 (MQ=255) cATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGata < 2:143285/150‑1 (MQ=255) tAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATgg > 1:546910/1‑150 (MQ=255) agaagaCCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATggc > 1:566855/1‑150 (MQ=255) ccTAGATATTGAAGGTAGAGGATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTgg > 2:2357026/1‑150 (MQ=255) tAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGgaa < 1:3402816/150‑1 (MQ=255) tAGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGgaa > 1:589162/1‑150 (MQ=255) ggATATTTAAGGTAGAGAACTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGgaat < 2:2493122/149‑1 (MQ=255) aGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGgaat < 1:1347700/150‑1 (MQ=255) aGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGgaat < 1:261020/150‑1 (MQ=255) aGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGgaat < 1:2193882/150‑1 (MQ=255) aGATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGgaat < 1:479994/150‑1 (MQ=255) gATATTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGgaatg < 2:524699/150‑1 (MQ=255) atTGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGgaatgaat > 1:951673/1‑150 (MQ=255) ttGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATc < 1:2992225/150‑1 (MQ=255) tGAAGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCa < 2:2280862/150‑1 (MQ=255) aaGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCAGt < 2:680346/150‑1 (MQ=255) aaGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCAGt < 2:147621/150‑1 (MQ=255) aaGGTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCAGt < 1:2318988/150‑1 (MQ=255) ggTAGAGAATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCAGTTa < 1:1005538/150‑1 (MQ=255) gagaATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCAGTTATTGa < 1:379804/150‑1 (MQ=255) gagaATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCAGTTATTGa < 1:146281/150‑1 (MQ=255) gagaATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCAGTTATTGa < 1:1875104/150‑1 (MQ=255) gagaATTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCAGTTATTGa < 2:1704393/150‑1 (MQ=255) ggattattTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCAGTTATTGAAg < 1:2605821/148‑1 (MQ=255) gaATTATTTTTACATGGTCAGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCAGTTATTGAAg < 1:1802214/150‑1 (MQ=255) aaTTATTTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTGTCCGGCTTTATCGTGTCATCCTTGGAGAAGTGAAGAAGATATGGCGACTGGAAGGAGTCAGTTATTGGAGt < 2:23239/150‑1 (MQ=255) attattTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCAGTTATTGAAGTa < 2:714080/150‑1 (MQ=255) tattTTTACATGGTCGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCAGTTATTGAAGTATg < 1:1064335/150‑1 (MQ=255) tggtcgGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCAGTTATTGAAGTATGTaaaaaaaaa < 2:46161/150‑2 (MQ=255) tggtcgGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCAGTTATTGAAGTATGTAAAAAAAAt < 2:807071/150‑1 (MQ=255) | AAATAGCAAAACAAAGAAATTTAATATATTCTGGATTTATTATTATAGACTACAATGATGCTGTTAATAAAGAAGATATGAAGGAAATCTCACAAATAACATTAGAAGACCTAGATATTGAAGGTAGAGAATTATTTTTACATGGTGGGGAAATAGGAATTCATGGCTACAATCATAATCCATTAGTATTTGATGGAGATATTGATTTTCCAGCTTTATCTTATCATCCTTGGAGAAGTGAAGAAGATATGGCGGCTGGAATGAATCAGTTATTGAAGTATGTAAAAAAAAT > CP028101/1012405‑1012696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |