| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP028101 | 1,889,727 | 0 | C | G | 27.1% | 827.0 / 150.8 | 392 | S100T (AGT→ACT) | C7Y58_09125 | diguanylate cyclase |
| Reads supporting (aligned to +/- strand): ref base C (64/194); new base G (96/0); total (197/195) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.11e-43 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 394 total aligned reads displayed.
GCCCTATTCCTTCATATTCTCCATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACGAAGTTCTTTATTTGTTATA > CP028101/1889578‑1889876 | cccTGTTCCTTCATATTCTCCATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACt > 2:2460701/1‑150 (MQ=255) cccTATTTCTTCATATTCTCCATTGATTCCAAGAGAGTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTTTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACt < 1:3056536/150‑1 (MQ=255) ttCCTTCATATTCTCCATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCcat < 1:2852529/150‑1 (MQ=255) tCCTTCATATTCTCCATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCcatc < 1:151028/150‑1 (MQ=255) tcTTCATATTCTCCATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCcatca > 2:904104/2‑150 (MQ=255) ccTTCATATTCTCCATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCcatca > 1:3350465/1‑150 (MQ=255) ccTTCATATTCTCCATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCcatca > 1:43597/1‑150 (MQ=255) ttCATATTCTCCATTAATTCCAAGAGATTTTAAAGTTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCata < 1:648077/150‑1 (MQ=255) tCATATTCTCCATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCatat < 2:412908/150‑1 (MQ=255) tatTCTCCATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCTAACATCATATTTCCAATAACAAGACTTCCATCatatata > 2:1116693/1‑150 (MQ=255) tatTCTCCATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATAAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCatatata < 1:1745838/150‑1 (MQ=255) atTCTCCATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCatatatat > 2:1444180/1‑150 (MQ=255) ttCTCCATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCAtatatata < 1:1841390/150‑1 (MQ=255) ttCTCCATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCAtatatata < 1:582137/150‑1 (MQ=255) tcCATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGAGTTCCATCATATATATAAGt > 2:213176/1‑150 (MQ=255) tcCATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGAGTTCCATCATATATATAAGt > 2:932093/1‑150 (MQ=255) ccATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGAGTTCTATCATATATATAAGtt > 2:1524643/1‑150 (MQ=255) aTTAATTCCAAGAGATTTTAAAATTCCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTgg < 2:2821951/150‑1 (MQ=255) ttAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGc < 2:755878/150‑1 (MQ=255) tAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGcc < 2:2802324/150‑1 (MQ=255) tAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGcc < 1:2989415/150‑1 (MQ=255) tAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGcc < 1:2770273/150‑1 (MQ=255) aaTTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCa < 2:2483806/150‑1 (MQ=255) ttCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGAGTTCCATCATATATATAAGTTGGCCAAt > 2:2095325/1‑150 (MQ=255) ttCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAAt < 2:1017067/150‑1 (MQ=255) tCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGAGTTCCATCATATATATAAGTTGGCCAATc > 2:1357856/1‑150 (MQ=255) ccAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATGTATATAAGTTGGCCAATCt < 1:2948546/150‑1 (MQ=255) ccAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCt < 1:1003879/150‑1 (MQ=255) cAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTTTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCtt < 2:3246044/150‑1 (MQ=255) cAAGAGATTTTAAAATCTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGAATTCGATCATATATATAGGTCGGCCAATCtt > 1:2656347/1‑150 (MQ=255) aaGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGAGTTCCATCATATATATAAGTTGGCCAATCttt > 2:588056/1‑150 (MQ=255) agagATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTc < 2:1224817/150‑1 (MQ=255) agagATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGAATTCCATCATATATATAAGTTGGCCAATCTTTc > 1:1433519/1‑150 (MQ=255) agaTTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCgg < 2:2233769/150‑1 (MQ=255) agaTTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCgg < 1:34614/150‑1 (MQ=255) ttttAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGc < 2:510603/150‑1 (MQ=255) ttAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGATTTCCGTCATATATATAAGTTGGCCAATCTTTCGGAGCTa > 2:191807/1‑150 (MQ=255) aaaaTTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAAt < 2:3469252/150‑1 (MQ=255) aaTTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAAtac < 1:3234514/150‑1 (MQ=255) aTTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAAtact > 1:736356/1‑150 (MQ=255) aTTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAAtact > 1:897638/1‑150 (MQ=255) aTTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAAtact < 1:410842/150‑1 (MQ=255) cTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGAGTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATActacta > 2:1320637/1‑150 (MQ=255) ttCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATa < 2:2939142/150‑1 (MQ=255) ttCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATa < 2:978904/150‑1 (MQ=255) tCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATac < 1:2474236/150‑1 (MQ=255) cccTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATaca < 2:3192855/150‑1 (MQ=255) cccTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACGAATaca < 1:1699679/150‑1 (MQ=255) aaTTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGAGTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTaa > 1:190405/1‑150 (MQ=255) ttGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGAGTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATgg > 2:3363606/1‑150 (MQ=255) tGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGAGTTTGATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATggg > 1:1252458/1‑150 (MQ=255) tGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATggg < 2:1552296/150‑1 (MQ=255) tGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATggg < 1:3294107/150‑1 (MQ=255) tGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATggg < 2:12619/150‑1 (MQ=255) gTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAAAAGGTGCATTGTAAAATGGGTAAAAGCcttctt > 2:2624844/1‑150 (MQ=255) tATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGAGTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCttt > 1:1406890/1‑150 (MQ=255) aTCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCCTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTc > 2:2156546/1‑150 (MQ=255) ccAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGAGTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCa > 2:3188776/1‑150 (MQ=255) ccAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGAGTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCa > 1:1985310/1‑150 (MQ=255) ccAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATAGATATAAGCTGGCCAATCCTTCGGAGCTAGCACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCa > 1:3040477/1‑150 (MQ=255) caacaaCTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCaa > 2:699287/1‑150 (MQ=255) cTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGGGTTCCATCATATATATAAGTTGGCAAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCa > 1:1814444/1‑150 (MQ=255) tCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGGGTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAAt > 1:1161586/1‑150 (MQ=255) ccAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAAtt < 1:2334426/150‑1 (MQ=255) atatTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGGGTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAAttttc > 1:1775307/1‑149 (MQ=255) tatTTAATGAATGTGCTGCCAACATCATATTTCCAATAGCAAGAATTCCATCATATATATAAGTTGGCCAATCTGTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTAc > 1:3535601/1‑150 (MQ=255) tatTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTAc < 2:3262079/150‑1 (MQ=255) atTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACa < 2:1691823/150‑1 (MQ=255) tttAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACaa < 1:1659307/150‑1 (MQ=255) ttAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGGCTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAAt > 1:1103974/1‑150 (MQ=255) tAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAAtt > 1:1335605/1‑150 (MQ=255) aatgaatgTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTc > 1:1010091/1‑150 (MQ=255) tgtgCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCAttttt < 2:341083/150‑1 (MQ=255) tgtgCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCAttttt < 1:1015055/150‑1 (MQ=255) tgctgaCAACATCATGTTTCCAAGAAAAAGATTTCCATCATATAGATAAGTGGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAGCCTCCAATTTTACAATTCATTTTTGa < 1:2130516/150‑1 (MQ=255) gctgcCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGAt < 1:2705032/150‑1 (MQ=255) ctgcCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATa > 1:804154/1‑150 (MQ=255) tgcCAACATCATATTTCCAATAACAAGAGTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATaa > 2:2018808/1‑150 (MQ=255) cAACATCATATTTCCAATAACAAGAGTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAAttt > 2:2366710/1‑150 (MQ=255) aaCATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTa < 2:242931/150‑1 (MQ=255) atcatATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCGAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCa < 2:1807417/150‑1 (MQ=255) tcatATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCAc < 2:2887134/150‑1 (MQ=255) tcatATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCAc < 1:2642544/150‑1 (MQ=255) tcatATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCAc < 1:2296612/150‑1 (MQ=255) catATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACg > 2:2576831/1‑150 (MQ=255) tatTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACGaa < 2:311264/150‑1 (MQ=255) atTTCCAGTAACAAGACTTCCATCATATATATAAGTTGGCCGATCGTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAGAATTGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACGAAg < 2:3559047/150‑1 (MQ=255) atTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACGAAg > 1:192914/1‑150 (MQ=255) tttCCAATAACAAGAGTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACGAAGt > 1:215396/1‑150 (MQ=255) tttCCAATAACAAGAGTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGCCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACGAAGt > 2:1733538/1‑150 (MQ=255) cAATAACAAGATTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACGAAGTTCtt > 1:475566/1‑150 (MQ=255) cAATAACAAGAGTTCCGTCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACGAAGTTCtt > 2:781850/1‑150 (MQ=255) aaTAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACGAAGTTCttt < 2:1435336/150‑1 (MQ=255) aTAACAAGACTTCCATCATATATATAAGTTGGCCAACCTTTCGGAGCTAATACTACTAATACAACCGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATACTTTATCACGAAGTTCTTTa < 1:3115488/150‑1 (MQ=255) tAACAAGAATTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACGAAGTTCTTTAt > 1:2220488/1‑150 (MQ=255) cAAGAGTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACGAAGTTCTTTATTTg > 2:1979779/1‑150 (MQ=255) cAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACGAAGTTCTTTATTTg < 2:2397561/150‑1 (MQ=255) aaGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACGAAGTTCTTTATTTGt < 2:95617/150‑1 (MQ=255) aGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACGAAGTTCTTTATTTGtt > 1:3197924/1‑150 (MQ=255) aGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACGAAGTTCTTTATTTGtt > 2:1039714/1‑150 (MQ=255) | GCCCTATTCCTTCATATTCTCCATTAATTCCAAGAGATTTTAAAATTTCTTTTCCCTCTTCACTTTCAAATTCTTGTTTTGCTCTATGTATCCAACAACTTCCAATATTTAATGAATGTGCTGCCAACATCATATTTCCAATAACAAGACTTCCATCATATATATAAGTTGGCCAATCTTTCGGAGCTAATACTACTAATACAACAGGTGCATTGTAAAATGGGTCAAAGTCTTCTTTCCAACCTCCAATTTTACAATTCATTTTTGATAATTTATCACGAAGTTCTTTATTTGTTATA > CP028101/1889578‑1889876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |