Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0281011,329,7040GC30.0% 773.6 / 157.4 406S181T (AGT→ACT) C7Y58_06380hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (169/83);  new base C (0/108);  total (169/237)
Fisher's exact test for biased strand distribution p-value = 4.27e-39
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 428 total aligned reads displayed.

TAAATCAAAAATGGGATATCTTCCAGAAGATTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAGAAAGCAATTATAAATATACTTGCTGTAAAAAAC  >  CP028101/1329555‑1329853
                                                                                                                                                     |                                                                                                                                                     
tAAATCAAAAATGGGATATCTTCCAGAAGATTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAgaaggaag                                                                                                                                                       >  2:1098939/1‑150 (MQ=255)
  aaTCAAAAATGGGATATCTTCCAGAAGATTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAACAGAAAGTGCAGAAGAGGGAAGtt                                                                                                                                                     >  2:1955127/1‑150 (MQ=255)
   aTCAAAAATGGGATATCTTCCAGAAGATTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGTAGAAGAAGGAAGttt                                                                                                                                                    <  2:1983902/150‑1 (MQ=255)
   aTCAAAAATGGGATATCTTCCAGAAGATTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGttt                                                                                                                                                    <  1:2303637/150‑1 (MQ=255)
   aTCAAAAATGGGATATCTTCCAGAAGATTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGttt                                                                                                                                                    >  1:1540442/1‑150 (MQ=255)
    tCAAAAATGGGATATCTTCCAGAAGATTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAAGAGAAAGTGCAGAAGAAGGAAGTTTa                                                                                                                                                   <  1:172097/150‑1 (MQ=255)
     cAAAAATGGGATATCTTCCAGAAGATTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAg                                                                                                                                                  <  2:815244/150‑1 (MQ=255)
     cAAAAATGGGATATCTTCCAGAAGATTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAg                                                                                                                                                  <  2:2367465/150‑1 (MQ=255)
      aaaaaTGGGATATCTTCCAGAAGATTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGa                                                                                                                                                 <  2:1921526/150‑1 (MQ=255)
        aaaTGGGATATCTTCCAGAAGATTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAATTTTAGAAg                                                                                                                                               <  1:3326818/150‑1 (MQ=255)
        aaaTGGGATATCTTCCAGAAGATTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAg                                                                                                                                               <  2:3432180/150‑1 (MQ=255)
               atatCTTCCAGAAGATTTTAGAGAAAATGTTAAAAATAAAGACGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTa                                                                                                                                        >  2:1222999/1‑150 (MQ=255)
                tatCTTCCAGGAGATTTTAGAGAAAATGTGAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATGTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTac                                                                                                                                       <  2:2797698/150‑1 (MQ=255)
                tatCTTCCAGAAGATTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTac                                                                                                                                       <  2:2089326/150‑1 (MQ=255)
                   cTTCCAGAAGATTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACt                                                                                                                                    <  2:909309/150‑1 (MQ=255)
                        agaagaTTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGga                                                                                                                               <  2:2546663/150‑1 (MQ=255)
                        agaagaTTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGga                                                                                                                               <  2:70131/150‑1 (MQ=255)
                          aagaTTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGgaaa                                                                                                                             <  2:3126186/150‑1 (MQ=255)
                           agaTTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGgaaaa                                                                                                                            <  1:1004253/150‑1 (MQ=255)
                            gaTTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGgaaaag                                                                                                                           <  2:164502/150‑1 (MQ=255)
                            gaTTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAAAACTTTTTTACACTGTGgaaaag                                                                                                                           <  1:2852701/150‑1 (MQ=255)
                                ttAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAATTTTACAAGTTTTTTACACTGTGgaaaagaaaa                                                                                                                       <  1:1350989/150‑1 (MQ=255)
                                 tAGAGAAAATGTTAAAAATAAAGAAGAATTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGGAAAAGaaaaa                                                                                                                      <  1:2588337/150‑1 (MQ=255)
                                   gagaAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACa                                                                                                                    >  2:2740682/1‑150 (MQ=255)
                                    agaAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACaa                                                                                                                   <  1:2233389/150‑1 (MQ=255)
                                    agaAAATGTGAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTCAGAAGTTTTTTACACTGTGGAAAAGAAAAACaa                                                                                                                   <  1:2897238/150‑1 (MQ=255)
                                     gaAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAAt                                                                                                                  >  1:1976005/1‑150 (MQ=255)
                                        aaTGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAg                                                                                                               <  1:1916644/150‑1 (MQ=255)
                                         aTGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAATTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGt                                                                                                              <  2:495632/150‑1 (MQ=255)
                                            ttAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGa                                                                                                           >  2:353960/1‑150 (MQ=255)
                                             tAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAATTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGAc                                                                                                          <  1:3250611/150‑1 (MQ=255)
                                               aaaaTAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAg                                                                                                        >  2:2351890/1‑150 (MQ=255)
                                               aaaaTAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAg                                                                                                        >  2:2230450/1‑150 (MQ=255)
                                                    aaaGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTATAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTAtt                                                                                                   <  1:206624/150‑1 (MQ=255)
                                                     aagaagaagTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACCTTAGAATTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTg                                                                                                  <  1:1940563/150‑1 (MQ=255)
                                                      agaagaagTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGa                                                                                                 >  2:709082/1‑150 (MQ=255)
                                                        aagaagTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGaaa                                                                                               <  2:1665501/150‑1 (MQ=255)
                                                        aagaagTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACCTTAGAATTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGaaa                                                                                               <  1:2117964/150‑1 (MQ=255)
                                                         agaagTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAg                                                                                              <  2:2460029/150‑1 (MQ=255)
                                                         agaagTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAg                                                                                              <  1:2695230/150‑1 (MQ=255)
                                                          gaagTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGa                                                                                             <  1:1466255/150‑1 (MQ=255)
                                                             gTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACAt                                                                                          <  2:3193432/150‑1 (MQ=255)
                                                               tAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGc                                                                                        <  1:1862436/150‑1 (MQ=255)
                                                                aGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCt                                                                                       <  2:1517318/150‑1 (MQ=255)
                                                                aGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAAAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCt                                                                                       <  1:3127610/150‑1 (MQ=255)
                                                                 gAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTa                                                                                      >  2:1723470/1‑150 (MQ=255)
                                                                      gTATATGAATGATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAATTGCAGAAGAAGCAACTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTAGTGAAAGACATGCTAGAGTa                                                                                 <  1:3553055/150‑1 (MQ=255)
                                                                      gTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAATTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTa                                                                                 <  2:2282682/150‑1 (MQ=255)
                                                                         tatGAAGAATATAGGGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTACAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAAt                                                                              <  1:2484850/150‑1 (MQ=255)
                                                                         tatGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAAt                                                                              <  1:1280418/150‑1 (MQ=255)
                                                                         tatGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAATTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAAt                                                                              <  2:466097/150‑1 (MQ=255)
                                                                           tGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTa                                                                            >  1:933415/1‑150 (MQ=255)
                                                                           tGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTa                                                                            >  2:2566340/1‑150 (MQ=255)
                                                                           tGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTa                                                                            <  2:585003/150‑1 (MQ=255)
                                                                           tGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTa                                                                            >  1:1436440/1‑150 (MQ=255)
                                                                              agaaTATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTaaaa                                                                         >  1:2000053/1‑150 (MQ=255)
                                                                                aaTATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGACCTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAg                                                                       <  1:2644754/150‑1 (MQ=255)
                                                                                aaTATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAg                                                                       <  2:1300179/150‑1 (MQ=255)
                                                                                 atatAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAgg                                                                      <  1:989686/150‑1 (MQ=255)
                                                                                 atatAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTACAACTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAgg                                                                      <  1:2663060/150‑1 (MQ=255)
                                                                                   agggagaTTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAAAAATAGAAAGTGAAGAAGAGGGAACTTTAGAGGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGAc                                                                    <  1:3035322/147‑1 (MQ=255)
                                                                                    taGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACt                                                                   >  1:363707/1‑150 (MQ=255)
                                                                                    taGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAAGAcc                                                                   >  2:3449319/1‑149 (MQ=255)
                                                                                        gaTTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTAttt                                                               >  2:537538/1‑150 (MQ=255)
                                                                                        gaTTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGAAATGCTAGAGTAAATTAAAAAGGACTAttt                                                               >  1:2334104/1‑150 (MQ=255)
                                                                                          tttAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTtat                                                             >  2:665398/1‑150 (MQ=255)
                                                                                             aaTGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGt                                                          <  2:2937290/150‑1 (MQ=255)
                                                                                               tGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTcc                                                        >  1:1782785/1‑150 (MQ=255)
                                                                                               tGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTcc                                                        >  2:3010587/1‑150 (MQ=255)
                                                                                                gAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCt                                                       >  1:1385913/1‑150 (MQ=255)
                                                                                                gAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGCTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTAGACAGTTATCGACAGAAATGCTAGAGTAAATTAAAAAGGACTATTTATAGTctt                                                       >  1:2409844/1‑148 (MQ=255)
                                                                                                  aaaaaGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCttt                                                     >  1:626925/1‑150 (MQ=255)
                                                                                                     aaGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAATTTTAGAATTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTg                                                  <  2:3227213/150‑1 (MQ=255)
                                                                                                       gAACTTTCATCAAAGAAAAAAGAAATAGAAAGTGCAGAAGAAAGAATTCTAGAACTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGtt                                                <  1:2531558/150‑1 (MQ=255)
                                                                                                        aaCTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATAAATAGTCCtttttaatt                                               <  2:398062/150‑5 (MQ=255)
                                                                                                            tttATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATaa                                           <  1:59402/150‑1 (MQ=255)
                                                                                                              tATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAAtt                                         <  2:2674663/150‑1 (MQ=255)
                                                                                                               aTCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAAttt                                        >  1:1175915/1‑150 (MQ=255)
                                                                                                                tCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAAtttt                                       >  2:2035446/1‑150 (MQ=255)
                                                                                                                tCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAAtttt                                       <  2:138535/150‑1 (MQ=255)
                                                                                                                  aaaGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTa                                     <  1:1227489/150‑1 (MQ=255)
                                                                                                                  aaaGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTa                                     <  1:396573/150‑1 (MQ=255)
                                                                                                                  aaaGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTa                                     <  1:2988764/150‑1 (MQ=255)
                                                                                                                    agagAAAGGAAATAGAAAGTTCAGAGGAGGGAACTTTAGAAGTTTTTTACACTGTGAAAAAGAAAACCAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAACTTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAg                                   <  1:2615484/150‑1 (MQ=255)
                                                                                                                    agagAAAAGAAATAGAAAGTGCAGAAGAAGGAATTTTAGAACTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAg                                   <  1:3480811/150‑1 (MQ=255)
                                                                                                                       gaaaagaaaTAGAAAGTGCAGAAGAAGGAAATTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAGaaa                                <  1:1574572/150‑1 (MQ=255)
                                                                                                                        aaaagaaaTAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAGAAAg                               <  1:764025/150‑1 (MQ=255)
                                                                                                                         aaagagaTAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAGAAAGc                              <  2:966887/150‑1 (MQ=255)
                                                                                                                         aaagaaaTAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAGAAAGc                              <  1:3209685/150‑1 (MQ=255)
                                                                                                                          aagaaaTAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAGAAAGCa                             >  2:1796667/1‑150 (MQ=255)
                                                                                                                              aaTAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTCTCATTTTTCAGAAAGCAAttc                         >  2:3566155/1‑149 (MQ=255)
                                                                                                                               aTAGAAAGTGCAGAAGAAGGAAGTTCAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAGAAAGCAATtat                        <  1:2811367/150‑1 (MQ=255)
                                                                                                                               aTAGAAAGTGCAGAAGAAGGAACTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAGAAAGCAATtat                        <  1:2832179/150‑1 (MQ=255)
                                                                                                                                           gaagaaGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAGAAAGCAATTATAAATATACTTGc            >  1:169444/1‑150 (MQ=255)
                                                                                                                                             agaagGAACTTTAGAATTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAGAAAGCAATTATAAATATACTTGCTg          <  2:2125804/150‑1 (MQ=255)
                                                                                                                                               aaggaatTTTAAAATTTTTTTACACTGTGGAAAAGAAAAACAATCAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAGAAAGCAATTATAAATATACTTGCTGTa        <  1:3081872/150‑1 (MQ=255)
                                                                                                                                                aggaagTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAGAAAACAATTATAAATATACTTGCTGTaa       >  1:2562359/1‑150 (MQ=255)
                                                                                                                                                 ggaacTTTAGAATTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAGAAAGCAATTATAAATATACTTGCTGTaaa      <  2:3084250/150‑1 (MQ=255)
                                                                                                                                                   aagTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAGAAAGCAATTATAAATATACTTGCTGTaaaaa    <  2:1157247/150‑1 (MQ=255)
                                                                                                                                                     gTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAGAAAGCAATTATAAATATACTTGCTGTAAAAAAc  <  2:3508914/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TAAATCAAAAATGGGATATCTTCCAGAAGATTTTAGAGAAAATGTTAAAAATAAAGAAGAAGTTAGAAAAGTATATGAAGAATATAGAGATTTAATGAAAAAAGAACTTTTATCAAAGAGAAAAGAAATAGAAAGTGCAGAAGAAGGAAGTTTAGAAGTTTTTTACACTGTGGAAAAGAAAAACAATAAGTGGACAGTTATTGAAAGACATGCTAGAGTAAATTAAAAAGGACTATTTATAGTCCTTTTTGTTTATAATTTTTAAGAAAGCAATTATAAATATACTTGCTGTAAAAAAC  >  CP028101/1329555‑1329853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑