Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP028101158,5380CG25.4% 836.9 / 110.3 401G89R (GGT→CGT) ‡C7Y58_00820YebC/PmpR family DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base C (70/197);  new base G (91/0);  total (204/197)
Fisher's exact test for biased strand distribution p-value = 7.04e-41
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 408 total aligned reads displayed.

CCTTTTTTCTTAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTGGATCTCCTCCA  >  CP028101/158390‑158686
                                                                                                                                                    |                                                                                                                                                    
      ttCTTAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCTATGACCTTCatat                                                                                                                                               >  1:2202984/1‑150 (MQ=255)
      ttCTTAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCatat                                                                                                                                               <  1:160422/150‑1 (MQ=255)
       tCTTAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAACGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTGATAACGTTCATAtc                                                                                                                                              >  2:2415308/1‑150 (MQ=255)
          tAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTTATAACGTTCATATCTCa                                                                                                                                           >  1:1566920/1‑150 (MQ=255)
           aaaCATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCAt                                                                                                                                          >  2:1051202/1‑150 (MQ=255)
           aaaCATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCAt                                                                                                                                          <  1:1010749/150‑1 (MQ=255)
            aaCATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCAtt                                                                                                                                         <  2:782427/150‑1 (MQ=255)
            aaCATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCAtt                                                                                                                                         <  2:3485045/150‑1 (MQ=255)
              cATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTCGTAACGTTCATACCTCATTTc                                                                                                                                       >  2:3257873/1‑150 (MQ=255)
              cATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTc                                                                                                                                       <  2:615752/150‑1 (MQ=255)
              cATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTc                                                                                                                                       <  1:1971250/150‑1 (MQ=255)
                 ccAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTTATGGCGTTCATATCTCATTTCTGt                                                                                                                                    >  1:2865580/1‑150 (MQ=255)
                 ccAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTCGTGGGGTTCATATCTCATTTCTGt                                                                                                                                    >  2:1376193/1‑150 (MQ=255)
                    aGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTaaa                                                                                                                                 <  2:1244575/150‑1 (MQ=255)
                     gATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTaaaa                                                                                                                                <  1:16652/150‑1 (MQ=255)
                       tACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAAGATTAATATCTCCTTTCTGTAAAATc                                                                                                                              >  1:3126521/1‑150 (MQ=255)
                          tGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTac                                                                                                                           <  1:613402/150‑1 (MQ=255)
                          tGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTac                                                                                                                           <  1:1449061/150‑1 (MQ=255)
                           gCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTTATGACGTTCATATCTCATTTCTGTAAAATCTaca                                                                                                                          >  1:494011/1‑150 (MQ=255)
                            cTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCGATGACATTCATATCTCATTTCTGTAAAATCTacac                                                                                                                         >  1:2243751/1‑150 (MQ=255)
                              ccATCTGCTCCACTATTTCCATCCTTACGAGTGAACGCCATTCTCATTTCTGAAGCTGTTCTATTTTTCCCATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTATATGGGATTCATATTTCATTTCTGTAAAATCTACAccc                                                                                                                       >  2:2327700/1‑150 (MQ=255)
                              ccATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTCGTAGGATTCATATCTCATTTCTGTAAAATCTacgtcc                                                                                                                       >  2:1863656/1‑146 (MQ=255)
                              ccATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACAccc                                                                                                                       <  1:2738096/150‑1 (MQ=255)
                              ccATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACAccc                                                                                                                       <  1:2802871/150‑1 (MQ=255)
                                  cTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATGAGGTTCATATCTCATTTCTGTAAAATCTACACCCTCTa                                                                                                                   >  2:2674604/1‑150 (MQ=255)
                                    gCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTGTGTAGGCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAAt                                                                                                                 >  1:2655989/1‑150 (MQ=255)
                                    gCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAAt                                                                                                                 <  1:2303846/150‑1 (MQ=255)
                                     cTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTCGTGGGGTTCATATCTCATTTCTGTAAAATCTACATCCTCTAAtt                                                                                                                >  1:2232848/1‑150 (MQ=255)
                                      tCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTCATGGCTTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATtc                                                                                                               >  2:689523/1‑150 (MQ=255)
                                       ccAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATGATCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATtct                                                                                                              >  1:2468948/1‑150 (MQ=255)
                                       ccAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATtct                                                                                                              <  2:437905/150‑1 (MQ=255)
                                         aaGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTcc                                                                                                            <  2:3326891/150‑1 (MQ=255)
                                         aaGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTcc                                                                                                            <  2:2603950/150‑1 (MQ=255)
                                          aGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCa                                                                                                           <  2:2831996/150‑1 (MQ=255)
                                            aTTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATCTCTGTAAAATCTACACCCTCTAATTCTCCAGa                                                                                                         <  1:935146/150‑1 (MQ=255)
                                             tttCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAGGCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGaa                                                                                                        >  2:1734182/1‑150 (MQ=255)
                                              ttCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAAc                                                                                                       >  1:2006629/1‑150 (MQ=255)
                                                 cATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCtt                                                                                                    >  1:569356/1‑150 (MQ=255)
                                                  aTCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCGTAAGATTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCttt                                                                                                   >  1:799847/1‑150 (MQ=255)
                                                     tttACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCTATGGTGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCtttttt                                                                                                >  2:2335127/1‑150 (MQ=255)
                                                     tttACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATGACGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCtttttt                                                                                                >  1:2850679/1‑150 (MQ=255)
                                                     tttACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCtttttt                                                                                                <  2:2965855/150‑1 (MQ=255)
                                                        aCGAGTGAAAGTCATTCTTATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCGTTTTTTAt                                                                                             <  1:1499008/150‑1 (MQ=255)
                                                        aCGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAAGTTTCATATCTCATTTCTGTAAAACCTACACCCTCTAATTCTCCAGAACCTTTTTTTAt                                                                                             >  1:1763708/1‑150 (MQ=255)
                                                         cGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATGGGTTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCtttttttctt                                                                                            >  2:721955/1‑147 (MQ=255)
                                                         cGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTAtt                                                                                            <  1:182634/150‑1 (MQ=255)
                                                           aGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGc                                                                                          <  1:2941391/150‑1 (MQ=255)
                                                           aGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGc                                                                                          <  2:100441/150‑1 (MQ=255)
                                                             tGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGctc                                                                                        <  1:1076322/150‑1 (MQ=255)
                                                              gAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAGGGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATCGctct                                                                                       >  2:2247906/1‑150 (MQ=255)
                                                               aaaGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCtt                                                                                      <  2:1633584/150‑1 (MQ=255)
                                                                   tCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCTATAGCCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTa                                                                                  >  2:3275551/1‑150 (MQ=255)
                                                                     aTTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTGGGTGGGGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAg                                                                                >  1:1324302/1‑150 (MQ=255)
                                                                     aTTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAg                                                                                <  1:329355/150‑1 (MQ=255)
                                                                     aTTCTCATTTCTGAAGCTGTTCTATTTTTATGATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAg                                                                                <  2:3531139/150‑1 (MQ=255)
                                                                        ctcATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAAGTTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAAACTTTTTTTATTGCTCTTTCTAAGata                                                                             >  2:2484476/1‑150 (MQ=255)
                                                                                tGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTGCATAGGGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTgg                                                                     >  1:3457958/1‑150 (MQ=255)
                                                                                tGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTgg                                                                     <  1:2535789/150‑1 (MQ=255)
                                                                                      tGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATAtt                                                               <  2:2932562/150‑1 (MQ=255)
                                                                                       gTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCGTAGTGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATAttt                                                              >  2:1804249/1‑150 (MQ=255)
                                                                                       gTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATAttt                                                              <  2:125820/150‑1 (MQ=255)
                                                                                         tCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTcc                                                            <  2:1115204/150‑1 (MQ=255)
                                                                                             tttttATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAgct                                                        >  1:1176320/1‑150 (MQ=255)
                                                                                             tttttATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAgct                                                        <  2:1295004/150‑1 (MQ=255)
                                                                                              ttttATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAgctt                                                       <  1:2248756/150‑1 (MQ=255)
                                                                                                 tattatCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAgcttttg                                                    <  1:312262/150‑1 (MQ=255)
                                                                                                   ttaccAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAATCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAgcttttgct                                                  >  1:3523478/5‑150 (MQ=255)
                                                                                                     atCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAAGCTTCATATCTCATTTCTGTAAAATCTATACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAgcttttgcttt                                                >  2:1976152/1‑150 (MQ=255)
                                                                                                        aGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTc                                             <  2:2093002/150‑1 (MQ=255)
                                                                                                         gTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCt                                            >  2:2862457/1‑150 (MQ=255)
                                                                                                         gTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCt                                            <  2:2062821/150‑1 (MQ=255)
                                                                                                           tACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTTTATGGTCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTAt                                          >  1:18790/1‑150 (MQ=255)
                                                                                                            aCTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTAtt                                         <  2:671248/150‑1 (MQ=255)
                                                                                                             cTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAAGCCTCATATCCCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGTTCTTTCTCAGATACCTTTTGGCATATTTCCCGCTTTTGCTTTTTCtcttt                                        >  2:3041608/1‑146 (MQ=255)
                                                                                                              tGCTTCAACTATAAAGGCTGTGCCAGCAGGTCCAGAACCTTCATATCGCATTTATGTAAAATCTACACTCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTgg                                       <  2:410884/150‑2 (MQ=255)
                                                                                                               gCTTCAACTATAAAGGCTGTTCCAGCAGGTCCGTAACATTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCa                                      >  1:2350617/1‑150 (MQ=255)
                                                                                                               gCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAGGGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCa                                      >  2:361254/1‑150 (MQ=255)
                                                                                                               gCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCa                                      <  1:1030404/150‑1 (MQ=255)
                                                                                                                cTTCAACTATAAAGGCTGTTCCAGCAGGTCTATGGTGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCaa                                     >  1:3174503/1‑150 (MQ=255)
                                                                                                                 ttCAACTATAAAGGCTGTTCCAGCAGGTCCATGGGGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCaag                                    >  1:2570733/1‑150 (MQ=255)
                                                                                                                 ttCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCaag                                    <  2:1320473/150‑1 (MQ=255)
                                                                                                                   cAACTATAAAGGCTGTTCCAGCAGGTCCATAAGATTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCaagtc                                  >  1:1391305/1‑150 (MQ=255)
                                                                                                                     aCTATAAAGGCTGTTCCAGCAGGTGGATAGGGTTCATATCTCATTTCTGTAAAATCCACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCaagtcta                                >  1:2982504/1‑150 (MQ=255)
                                                                                                                           aaGGCTGTTCCAGCAGGTCCATAGCGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCtt                          >  2:2796893/1‑150 (MQ=255)
                                                                                                                            aGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTg                         <  1:2365322/150‑1 (MQ=255)
                                                                                                                             ggCTGTTCCAGCAGGTTCATAACGTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTTGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTTTTgg                        >  2:3025533/1‑150 (MQ=255)
                                                                                                                              gCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTggg                       <  1:1218065/150‑1 (MQ=255)
                                                                                                                                tGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGtt                     <  2:3110213/150‑1 (MQ=255)
                                                                                                                                 gTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTg                    <  2:2034722/150‑1 (MQ=255)
                                                                                                                                    ccAGCAGGTCTATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAg                 >  2:965082/1‑150 (MQ=255)
                                                                                                                                    ccAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAg                 <  2:3505490/150‑1 (MQ=255)
                                                                                                                                    ccAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAg                 <  1:864524/150‑1 (MQ=255)
                                                                                                                                    ccAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAg                 <  2:3341347/150‑1 (MQ=255)
                                                                                                                                     cagcagGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGt                <  2:3407182/150‑1 (MQ=255)
                                                                                                                                         agGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTgg            <  1:906954/150‑1 (MQ=255)
                                                                                                                                         agGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTgg            <  2:1485539/150‑1 (MQ=255)
                                                                                                                                            tCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAGGTTTGGAtc         <  1:652629/150‑1 (MQ=255)
                                                                                                                                                   tcTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTGGATCTCCTCCa  >  2:2359051/2‑150 (MQ=255)
                                                                                                                                                   ccTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTGGATCTCCTCCa  >  1:3381925/1‑150 (MQ=255)
                                                                                                                                                   ccTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTGGATCTCCTCCa  <  1:1734182/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CCTTTTTTCTTAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTGGATCTCCTCCA  >  CP028101/158390‑158686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑