Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP028101128,3870GA23.8% 1025.6 / 65.3 473E118K (GAA→AAA) rpsB30S ribosomal protein S2
Reads supporting (aligned to +/- strand):  ref base G (293/53);  new base A (0/108);  total (293/180)
Fisher's exact test for biased strand distribution p-value = 0.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 480 total aligned reads displayed.

TATTTGTTGGAACTAAAAAACAAGCTCAAGAAGCTATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGAAAAAGTTCCAGATGCAATATATGTAGTAGATGTA  >  CP028101/128238‑128536
                                                                                                                                                       |                                                                                                                                                     
 aTTTGTTGGAACTAAAAAACAAGCTCAAGAAGCTATTAAAGAACAAGCAGAAAGATCTGGAATGTCCTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGGGAATTGAAAGAATGAAAGAA‑TTA‑Ga                                                                                                                                                      >  2:2491572/1‑150 (MQ=255)
     gttgGAACTAAAAAACAAGCTCAAGAAGCTATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑Gaaaaa                                                                                                                                                  >  1:1059682/1‑150 (MQ=255)
     gttgGAACTAAAAAACAAGCGCAAGAAGCTATGAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTAAGaaaa                                                                                                                                                   <  2:2632650/150‑1 (MQ=255)
      ttgGAACTAAAAAACAAGCTCAAGAAGCTATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAAAA‑TTA‑AAAAAAt                                                                                                                                                 <  2:1581874/150‑1 (MQ=255)
       tgGAACTAAAAAACAAGCTCAAGAAGCTATTAAAGCACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAAtt                                                                                                                                                >  2:2522918/1‑150 (MQ=255)
       tgGAACTAAAAAACAAGCTCAAGAAGCTATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑CTA‑AAAAAAtt                                                                                                                                                <  1:265863/150‑1 (MQ=255)
        ggAACTAAAAAACAAGCTCAAGAAGCTATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TCA‑AAAAAAtta                                                                                                                                               <  1:3285915/150‑2 (MQ=255)
           aCTAAAAAACAAGCTCAAGAAGCTATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGAt                                                                                                                                            >  1:2084775/1‑150 (MQ=255)
            cTAAAAAACAAGCTCAAGAAGCTATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATg                                                                                                                                           >  1:2336453/1‑150 (MQ=255)
             tAAAAAACAAGCTCAAGAAGCTATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGc                                                                                                                                          >  1:1556148/1‑150 (MQ=255)
             tAAAAAACAAGCTCAAGAAGCTATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGc                                                                                                                                          >  2:2947930/1‑150 (MQ=255)
                    cAAGCTCAAGAAGCTATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGa                                                                                                                                   >  1:2966829/1‑150 (MQ=255)
                          cAAGAAGCTATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTa                                                                                                                             >  2:1374708/1‑150 (MQ=255)
                          cAAGAAGCTATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATCGGATGCAGAAGGAATCTTa                                                                                                                             >  2:3027289/1‑150 (MQ=255)
                          cAAGAAGCTATGAAAGAACAAGCAGAAAAATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAGTGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑AAAAAATTAAATGCAGAAGGAACCTTa                                                                                                                             <  2:3486014/150‑1 (MQ=255)
                              aagCTATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑AAAAAATTGGATGCAAAAGGAACCTTAGATa                                                                                                                         <  2:3429746/150‑1 (MQ=255)
                               agCTATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATAc                                                                                                                        >  2:1628593/1‑150 (MQ=255)
                                 cTATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAg                                                                                                                      >  1:1832092/1‑150 (MQ=255)
                                  tATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TCA‑GAAAAATTGGATGCAGAAGGAACCTTAGATACAGa                                                                                                                     <  2:603937/150‑1 (MQ=255)
                                   agtgaaGAACAAGCAGAAAGATCTAGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAGAAGAGAATTGAAAGAATGAAAGAA‑TTA‑AAAAAATTGGATGCAGAAAGAATCTTAGATACAGAt                                                                                                                    <  2:1225108/146‑1 (MQ=255)
                                    ttAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TCA‑AAAAAATTAGATACAAAAGAAATCTTAGATACAGAtt                                                                                                                   <  2:1832416/150‑1 (MQ=255)
                                     tAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATta                                                                                                                  >  2:2779350/1‑150 (MQ=255)
                                      aaaGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATtat                                                                                                                 >  1:2036022/1‑150 (MQ=255)
                                       aaGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATtata                                                                                                                >  1:1033524/1‑150 (MQ=255)
                                              aGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTaaaaa                                                                                                         >  2:527163/1‑150 (MQ=255)
                                                  gAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAaagaa                                                                                                     >  1:2257916/1‑150 (MQ=255)
                                                   acaGATTTGGAATGTACCATGCAACTATTAGATTGCTAGGTTGCACGTTCACAAACTTCTCTACCATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAaagagg                                                                                                    >  2:2342988/3‑148 (MQ=255)
                                                     aGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑AAAAAATTGAATGCAGAAGGAACCTTAGATACAGATTATACTAAAAAAGAAgct                                                                                                  <  2:3198158/150‑1 (MQ=255)
                                                      gATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGCA‑TTA‑AAAAAATTGGATGCAAAAGGAATCTTAGATACAGATTATACTAAAAAAGAAgctg                                                                                                 <  2:2051242/150‑1 (MQ=255)
                                                      gATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAgctg                                                                                                 >  1:1668969/1‑150 (MQ=255)
                                                       cctagccatctACTATTTACATAGTACATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAgctgc                                                                                                >  2:383286/11‑150 (MQ=255)
                                                       aTCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAgctgc                                                                                                <  1:548321/150‑1 (MQ=255)
                                                       aTCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTAGATACAAAAGGAACCTCAGATACAGATTATACTAAAAAAGAAgctgc                                                                                                <  2:656470/150‑1 (MQ=255)
                                                          tGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGa                                                                                             >  1:1419417/1‑150 (MQ=255)
                                                              aTGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAAttt                                                                                         >  1:3373097/1‑150 (MQ=255)
                                                                gTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAg                                                                                       >  2:63154/1‑150 (MQ=255)
                                                                gTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAAAA‑TTA‑AAAAAATTGGATGCAGAAGGAACCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAg                                                                                       <  2:888692/150‑1 (MQ=255)
                                                                 tACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGa                                                                                      >  1:2124426/1‑150 (MQ=255)
                                                                 tACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑CAAAAATTGAATACAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGa                                                                                      <  1:1112143/150‑1 (MQ=255)
                                                                 tACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑AAAAAATTGGATGCAGAAGGAACCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGa                                                                                      <  1:1157301/150‑1 (MQ=255)
                                                                  aCTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGaa                                                                                     >  1:1618927/1‑150 (MQ=255)
                                                                  aCTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAAAA‑TTA‑CAAAAATTGAATACAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGaa                                                                                     <  1:375088/150‑1 (MQ=255)
                                                                    tATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGaaaa                                                                                   >  1:63019/1‑150 (MQ=255)
                                                                     aTGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑AAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAg                                                                                  <  1:3185048/150‑1 (MQ=255)
                                                                     aTGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAAAA‑CTA‑AAAAAATTGAATGCAGAAAGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAg                                                                                  <  2:797439/150‑1 (MQ=255)
                                                                     aTGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTAAAAGCAAAAAGAGAATGGAAAGAA‑GAAAAAACTCA‑AAAAACTTAAATGCAGAAGGAACCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAg                                                                                  <  1:3022790/150‑1 (MQ=255)
                                                                       gTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAGAGaa                                                                                >  1:3139675/1‑150 (MQ=255)
                                                                       gTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAACAA‑CTA‑CAAAAATTAAATGCAGAAAGAACCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGaa                                                                                <  1:3221628/150‑1 (MQ=255)
                                                                        tAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAAt                                                                               >  1:1335940/1‑150 (MQ=255)
                                                                         aaaTAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAAtt                                                                              >  2:1944305/1‑150 (MQ=255)
                                                                          aaTAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑AAAAAATTGGATACAAAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAAtga                                                                             <  2:1132773/150‑3 (MQ=255)
                                                                            tagtagATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑AAAAAATTAGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATc                                                                           <  1:1243732/150‑1 (MQ=255)
                                                                                agATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTaaa                                                                       >  2:2090637/1‑150 (MQ=255)
                                                                                 gATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAAc                                                                      >  1:2581560/1‑150 (MQ=255)
                                                                                 gATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑CTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAAc                                                                      <  2:1072964/150‑1 (MQ=255)
                                                                                   tGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAAAA‑TTA‑AAAAAATTGGATACAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTACTGAATTTAGAAAAGAATTATCTAAACtt                                                                    <  2:737013/150‑1 (MQ=255)
                                                                                     gCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTc                                                                  <  2:2169826/150‑1 (MQ=255)
                                                                                     gCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTc                                                                  >  2:1791094/1‑150 (MQ=255)
                                                                                       tAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTa                                                                >  1:254036/1‑150 (MQ=255)
                                                                                            ggAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TCA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAAc                                                           <  1:698905/150‑1 (MQ=255)
                                                                                            ggAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TCA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAAc                                                           <  2:2982159/150‑1 (MQ=255)
                                                                                            ggAATGTTAACAAACTTCTCTACAATAAAAAAGAGAATTGAAAGAATGAAAAAA‑TTA‑GAAAAATTGGATGCAGAAAGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAAc                                                           <  2:145249/150‑1 (MQ=255)
                                                                                            ggAATGGTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATAAAAAAA‑CTA‑AAAAAATTAGATACAGAACGAACCTTAGATACAGAGTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAAc                                                           <  2:2231857/150‑1 (MQ=255)
                                                                                            ggAAGGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑CCA‑AAAAAATTAAATGCAGAAGGAACCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAAc                                                           <  1:2287405/150‑1 (MQ=255)
                                                                                             gAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑CCA‑GAAAAATTGAATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACt                                                          <  1:909975/150‑1 (MQ=255)
                                                                                              aaTGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACtt                                                         >  1:1454109/1‑150 (MQ=255)
                                                                                              aaTGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACtt                                                         >  1:2502614/1‑150 (MQ=255)
                                                                                                tGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTAt                                                       >  2:1672226/1‑150 (MQ=255)
                                                                                                tGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTAt                                                       >  2:2229694/1‑150 (MQ=255)
                                                                                                 gTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATc                                                      >  1:721332/1‑150 (MQ=255)
                                                                                                   tAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTg                                                    >  2:1296364/1‑150 (MQ=255)
                                                                                                    aaCAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGACAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGACAAGAATTATCTAAACTTCCCAAAAACTTATCTgg                                                   >  1:2440684/1‑150 (MQ=255)
                                                                                                    aaCAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTgg                                                   >  1:1949704/1‑150 (MQ=255)
                                                                                                          cTTCTCTACAATCAAAAAGAGAATTGAAAGAATGCAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTag                                             >  2:3468482/1‑150 (MQ=255)
                                                                                                           ttCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAAAA‑TTA‑AAAAAATTGAATGCAAAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTaga                                            <  1:12943/150‑1 (MQ=255)
                                                                                                            tctcTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑CAAAAATTGAATGCAGAAGGAATCTTAGATACAGATTATACGAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTagag                                           <  1:491513/150‑1 (MQ=255)
                                                                                                               ctACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGata                                        >  1:795165/1‑150 (MQ=255)
                                                                                                               ctACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGata                                        <  1:219316/150‑1 (MQ=255)
                                                                                                                 acgaTCAAAGAGAGAATTGAAAGGATGAAAGAA‑CTA‑AAAAAATTAAATGCAAAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATg                                      <  1:1803595/147‑1 (MQ=255)
                                                                                                                 aCAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑AAAAAATTGGATGCAGAAGGAACCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATg                                      <  2:213340/150‑1 (MQ=255)
                                                                                                                   aaTCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑AAAAAATTGGATACAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGa                                    <  2:439732/150‑1 (MQ=255)
                                                                                                                    aTCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGaa                                   >  2:2716987/1‑150 (MQ=255)
                                                                                                                     tCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGaaa                                  >  2:2377179/1‑150 (MQ=255)
                                                                                                                      cAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGaaaa                                 >  2:1272526/1‑150 (MQ=255)
                                                                                                                      cAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGaaaa                                 >  1:2825010/1‑150 (MQ=255)
                                                                                                                      cAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑AAAAAATTGGATGCAGAAGGAACCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGaaaa                                 <  1:2863298/150‑1 (MQ=255)
                                                                                                                            gagaATTGAAAGAATGAAAGAA‑TTA‑AAAAAATTGGATGCAGAAGGAACCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGAAAAAGTTcc                           <  1:868548/150‑1 (MQ=255)
                                                                                                                            gagaATTGAAAGAAGGAAAAAA‑TCA‑AAAAAATTGGATGCAAAAGGAACCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGAAAAAGTTcc                           <  1:3419107/150‑1 (MQ=255)
                                                                                                                              gaATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGAAAAAGTTCCAg                         >  2:1534073/1‑150 (MQ=255)
                                                                                                                              gaATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGAAAAAGTTCCAg                         >  2:685966/1‑150 (MQ=255)
                                                                                                                                aTTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGAAAAAGTTCCAGAt                       >  2:3114005/1‑150 (MQ=255)
                                                                                                                                 ttGAAAGAATGAAAAAA‑TTA‑AAAAAATTGGGCGCAGAAGAAATCTTAGATACAGATTATACTAAAAAAGAAGCTACTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGAAAAAGTTCCAGATg                      <  2:1507788/150‑1 (MQ=255)
                                                                                                                                    aaagaatgaaagaa‑tTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGAAAAAGTTCCAGATGCaa                   >  1:3468402/1‑150 (MQ=255)
                                                                                                                                     aagaatgaaagaa‑cCA‑GAAAAATTGGATGCAGAAGGAACCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGAAAAAGTTCCAGATGCAat                  <  2:3155195/150‑1 (MQ=255)
                                                                                                                                      agaatgaaagaa‑tTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGAAAAAGTTCCAGATGCAata                 >  2:1004689/1‑150 (MQ=255)
                                                                                                                                        aatgaaaaaa‑cTA‑AAAAAATTGGATGCAGAACGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGAAAAAGTTCCAGATGCAatata               <  2:3269/150‑1 (MQ=255)
                                                                                                                                          tgaaagaa‑tTA‑AAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAATAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGAAAAAGTTCCAGATGCAATATATg             <  1:1737748/150‑1 (MQ=255)
                                                                                                                                           gaaagaa‑tTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGAAAAAGTTCCAGATGCAATATATgt            >  1:2768670/1‑150 (MQ=255)
                                                                                                                                            aaagaa‑tTA‑AAAAAATTGGATGCAAAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGAAAAAGTTCCAGATGCAATATATgta           <  2:2311150/150‑1 (MQ=255)
                                                                                                                                            aaagaa‑tCA‑AAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGAAAAAGTTCCAGATGCAATATATgta           <  1:2418110/150‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                     
TATTTGTTGGAACTAAAAAACAAGCTCAAGAAGCTATTAAAGAACAAGCAGAAAGATCTGGAATGTACTATGTAAATAGTAGATGGCTAGGTGGAATGTTAACAAACTTCTCTACAATCAAAAAGAGAATTGAAAGAATGAAAGAA‑TTA‑GAAAAATTGGATGCAGAAGGAATCTTAGATACAGATTATACTAAAAAAGAAGCTGCTGAATTTAGAAAAGAATTATCTAAACTTTCTAAAAACTTATCTGGAATTAGAGATATGGAAAAAGTTCCAGATGCAATATATGTAGTAGATGTA  >  CP028101/128238‑128536

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑