New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP028101 = 900717NA (NA)423 (0.950)
+CCACTTTATC		 144/278 0.8 NA pseudogene (930/1276 nt) C7Y58_04430 ISL3 family transposase
?CP028101 900717 = NA (NA)pseudogene (930/1276 nt) C7Y58_04430 ISL3 family transposase

TCTTGATATATATTAAAATTAGCTTCTAATTCAGGGCTTTTTTCTAAGAGATAATTTACTGCTAAGTTTGCGCTTAAAACTTTGACAGTAATAGTTTATTTGACAAAGATCAGGATAATATTTTAATAATGATTTCCAGAATAGTTTAAA  >  CP028101/900663‑900812
                                                      |                                                                                               
tCTTGATATATATTAAAATTAGCTTCTAATTCAGGGCTTTTTTCTAAGAGATAATTTACTTCTGAGTTTGCGCTTAAAACTTTGAAAGTAATAGTTTGTTTTACAAAGATCAGGATAACACTTTCACCATGATTTCCacaaaaatttgcc  >  1:3067598/1‑138 (MQ=255)
                                                      |                                                                                               
TCTTGATATATATTAAAATTAGCTTCTAATTCAGGGCTTTTTTCTAAGAGATAATTTACTGCTAAGTTTGCGCTTAAAACTTTGACAGTAATAGTTTATTTGACAAAGATCAGGATAATATTTTAATAATGATTTCCAGAATAGTTTAAA  >  CP028101/900663‑900812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.