New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP028101	539881 =	494 (1.040)	8 (0.020)	8/278	22.7	1.7%	intergenic (+177/‑55)	rrf/C7Y58_02750	5S ribosomal RNA/ribosome maturation factor
	?	CP028101	539907 =	454 (1.020)					intergenic (+203/‑29)	rrf/C7Y58_02750	5S ribosomal RNA/ribosome maturation factor
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTCTACATCTACAAGAGAGAGGTTCATTTCTTCTATAAAAGGATTAACAATTCTTGTAATTTTTTCTACAATTTGATTATTCTCTTCCATAGTGATTTTTCTCCTCCTTTTCTACAAAATAAGGAGTGGCTTTGTCCACTCCTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP028101/540025‑539881 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccactccttaTTTTGTAGAAAAGGAGGAGAAAAATCACTATGGAAGAGAATAATCAAATTGTAGAAAAAATTACAAGAATTGTTAATCCTTTTATAGAAGAAATGAACCTCTCTCTTGTAGATGTAGAGTATGTACAAGATGGAGG  >  CP028101/539907‑540042                                                                                                                                                                                                                                                                                           CTCTACATCTACAAGAGAGAGGTTCATTTCTTCTCTAAAAGGATTAACAACTCTTTTAATTTTTTCTCCAAGTTGATTATTCTCTTCCATAGTGAGTTTTCTCCTCCTTTTCTTCAAAATAAGGAGTGGCTTTTTCCACCCCTTCTTTTG                                                                                                                                     >  1:180079/1‑150                                           ATTAACAATTCTTGTAATTTTTTCTACAATTTGATTATTCTCTTCCATAGTGATTTTTCCCCTCCTTTTCTACAAACTAAGGAGTGGCCTTGTCCACTCCTTATTTTGTAGAAAAGGAGGAGAAAAATCACTATGGAAGAGAATAATCAA                                                                                           >  2:630950/1‑150                                                                         TTGATTATTCTCTTCCATATTGATTTTTCTCCTCCTTTTCTACAAAATAAGGATTGGCTTTGTCCACTCCTTATTTTGTAGAAAAGGAGGAGAAAAATCACTATGGAAGAGAATAATCAAATTGTAGAAAAAATTACAAGAATTGTTAAT                                                             <  1:1943563/150‑1                                                                                         ATAGTGATTTTTCTCCTCCTTTTCTACAAAATAAGGAGTGGCTTTGTCCACTCCTTATTTTGTAGAAAAGGAGGAGAAAAATCACTATGGAAGAGAATAATCAAATTGTAGAAAAAATTACAAGAATTGTTAATCCTTTTATAGAAGAAA                                             >  2:772523/1‑150                                                                                                TTTTTCTCCTCCTTTTCTACAAAATAAGGAGTGGCTTTGTCAACTCCTTATTTTGTAGAAAAGGAGGAGAAAAATCAATATGGAAGAGAATAATCAAATTGTAGAAAAAATTACAAGAATTGTTAATCCTTTTATAGAAGAAATGAACCT                                      >  1:1348601/1‑150                                                                                                           CTTTTCTACAAAATAAGGAGTGGCTTTGTCCACTCCTTATTTTGTAGAAAAGGAGGAGAAAAATCACTATGGAAGAGAATAATCAAATTGTAGAAAAAATTACAAGAATTGTTAATCCTTTTATAGAAGAAATGAACCTCTCTCTTGTAG                           <  1:630950/150‑1                                                                                                                         AAGGAGTGGCTTTGTCCACTCCTTATTTTGTAGAAAAGGAGGAGAAAAATCACTATGGAAGAGAATAATCAAATTGTAGAAAAAATTACAAGAATTGTTAATCCTTTTATAGAAGAAATGAACCTCTCTCTTGTAGATGTAGAGTATGTA             >  2:1147762/1‑150                                                                                                                                    aaaTCCACTCCTTATTGTGTAGAAAAGGAGGAGAAAAATCACTATGGAAGAGAATAATCAAATTGTAGAAAAAATTACAAGAATTTTGAATCCTTTTATAGAAGAAATGAACCTCTCTCTTGTAGATGTAGAGTATGTACAAGATGGAGG  <  1:1105662/147‑1                                                                                                                                                                                                                                                                                           CTCTACATCTACAAGAGAGAGGTTCATTTCTTCTATAAAAGGATTAACAATTCTTGTAATTTTTTCTACAATTTGATTATTCTCTTCCATAGTGATTTTTCTCCTCCTTTTCTACAAAATAAGGAGTGGCTTTGTCCACTCCTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP028101/540025‑539881 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccactccttaTTTTGTAGAAAAGGAGGAGAAAAATCACTATGGAAGAGAATAATCAAATTGTAGAAAAAATTACAAGAATTGTTAATCCTTTTATAGAAGAAATGAACCTCTCTCTTGTAGATGTAGAGTATGTACAAGATGGAGG  >  CP028101/539907‑540042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.