| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP028101 | 1,054,222 | (G)11→10 | coding (138/150 nt) | C7Y58_05125 → | site‑specific DNA‑methyltransferase (Type III DNA modification enzyme) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP028101 | 1,054,222 | 0 | G | . | 93.8% | 482.5 / 44.9 | 163 | coding (138/150 nt) | C7Y58_05125 | site‑specific DNA‑methyltransferase (Type III DNA modification enzyme) |
| Reads supporting (aligned to +/- strand): ref base G (9/1); new base . (142/10); total (151/12) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 173 total aligned reads displayed.
GTAGAAAATGGAAAAGTTAGATGGAACTAGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGGGTACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAATTGGGATAATACAGAAAATATCTA > CP028101/1054078‑1054370 | gTAGAAAATGGAAAAGTTAGATGGAACTAGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAgg > 1:1316336/1‑150 (MQ=255)gTAGAAAATGGAAAAGTTAGATGGAACTAGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAgg > 2:344676/1‑150 (MQ=255)gTAGAAAATGGAAAAGTTAGATGGAACTAGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAgg > 2:26494/1‑150 (MQ=255) aGAAAATGGAAAAGTTAGATGGAACTAGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGAt > 2:118717/1‑150 (MQ=255) aGAAAATGGAAAAGTTAGATGGAACTAGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGAt > 2:118718/1‑150 (MQ=255) aaaaTGGAAAAGTTAGATGGAACTAGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGG‑‑‑TACAGGATTtag < 1:1571677/150‑1 (MQ=255) aaTGGAAAAGTTAGATGGAACTAGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGG‑‑TACAGGATTtagt < 2:439382/150‑1 (MQ=255) tGGAAAAGTTAGATGGAACTAGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTtagt‑a > 2:1497480/1‑150 (MQ=255) ggAAAAGTTAGATGGAACTAGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTtagtcg > 2:1743631/1‑148 (MQ=255) gAAAAGTTAGATGGAACTAGTATGAATTTAGTTCAAGAAAATANTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGG‑‑TACAGGATTTAGT‑AGAt > 1:1786382/1‑150 (MQ=255) aGTTAGATGGAACTAGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑GGATTCt > 1:2206032/1‑150 (MQ=255) gTTAGATGGAACTAGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGGGTACAGGATTTAGT‑AGATTCt > 2:259487/1‑150 (MQ=255) tAGATGGAACTAGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAg > 2:570528/1‑150 (MQ=255) aGATGGAACTAGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAgg > 1:603921/1‑150 (MQ=255) gATGGAACTAGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGG‑‑TACAGGATTTAGT‑AGATTCTAAGGaa > 1:1016770/1‑150 (MQ=255) aGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATActc > 2:461757/1‑150 (MQ=255) aGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATActc > 2:461758/1‑150 (MQ=255) aGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATActc > 1:3119655/1‑150 (MQ=255) tATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCtt > 1:2299201/1‑150 (MQ=255) tATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCtt > 1:528240/1‑150 (MQ=255) aTGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCttt > 2:1019105/1‑150 (MQ=255) tGAATTTAGTTTGAGAAAATATTAAAAAGTTAAAAGAAATTTGTCCAGAGATATTTATAGAAGGAAGAATAGCCTTTGATGTATTAAAGCAAATTTTAGTTAGGGGGTGGCG‑CACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTa < 1:830854/150‑1 (MQ=11) gAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGG‑‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAAc < 1:645275/150‑1 (MQ=255) aagttAGTTCAAGAAAAGATGAAAAAGTTAAAAGAAATTTTTCTAGAGGTGTTTATAGAAGGAGGAAGAGATTTTGATTTATTAAAGCCCATTTTAGT‑CCTGGGGTTGCTTACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAAc < 1:1079738/147‑1 (MQ=2) aaTTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGGGTACAGGATTTAGT‑AGATTCTAAGGAAAGCTACTCTTTaa > 2:2437203/1‑150 (MQ=255) tatttCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTAGAGAAGGAAAAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGA‑‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTtgga < 2:33039/147‑1 (MQ=11) gTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTACCTtggaa > 1:1446828/1‑150 (MQ=255) gTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTtggaa > 1:3322240/1‑150 (MQ=255) gTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGG‑‑TACAGGATTTAGT‑AAATTCTAAGGAAAGATACTCTTTAACTtggaat > 1:3473717/1‑150 (MQ=255) ttCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGG‑‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTtggaatg < 2:958045/150‑1 (MQ=9) tCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACATGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTtggaatg > 1:3249314/1‑150 (MQ=255) tCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGG‑‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTtggaatgg > 1:544398/1‑150 (MQ=2) cAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTtggaatgg > 1:1051676/1‑150 (MQ=37) cAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTtggaatgg > 1:1752069/1‑150 (MQ=37) cAAGAAAATATTAAAAAGTTAAAAAAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAACAAATTTTAGTT‑CGGGGGGGGGGTACAGGATTTAGT‑AGATTCTAAGGAAAGATGCTCCTTAACCtggaatgg > 2:3496849/1‑150 (MQ=11) gAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGaaa > 2:2760065/1‑150 (MQ=37) aaaaTATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGACTGGaaaa > 2:2151289/1‑150 (MQ=255) aaaaGATTAAAAAGTGAAAAGAAATTTTTCCAGAGATGTTGATAAAAGGAAGAGGAGACTTTGGTTCATGAAAGCAAATTTTAGT‑‑GGGGGGGGTGGTACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAAt < 2:814058/150‑1 (MQ=11) aaaTATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGGGTACAGGATTTAGT‑AGACTCTAAGGAAAGATACTCTTTAACTTGGAATGGaaaa > 2:1744797/1‑150 (MQ=255) aaaTATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAAt > 1:3397748/1‑150 (MQ=25) aaaTATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAAt > 1:693882/1‑150 (MQ=25) aaaTACTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGGGTACCGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGaaaa > 2:1744790/1‑150 (MQ=255) atTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAag > 1:1169577/1‑150 (MQ=17) ttAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTACGGAAAGATACTCTTTAACTTGGAATGGAAAATCAaga > 1:1299228/1‑150 (MQ=12) ttAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAaga > 1:1299233/1‑150 (MQ=17) aaaaaGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTCAACTTGGAATGGAAAATCAAGAG‑c > 2:843553/1‑150 (MQ=2) aGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑Caaaa > 1:571985/1‑148 (MQ=11) gTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGAc > 1:816393/1‑150 (MQ=11) tAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACaa > 2:1476030/1‑150 (MQ=11) aaaaGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACaaa > 2:852601/1‑150 (MQ=11) aGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAg > 2:3505645/1‑150 (MQ=11) aaTTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGGGTACAGGACTTAGTCAG‑TTCTCAGAAAAGATACTCTTTAACTTGGAATGGAAAATCAA‑AGACAAAACAAATAGca > 2:3039313/1‑150 (MQ=11) ccAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGaagt > 1:619889/1‑150 (MQ=11) cAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAACTCAAGAG‑CAAGACAAATAGCACAAGaagta > 2:3343659/1‑150 (MQ=2) gagaTATTTATAGAAGGAAGACTAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGAAAAATCACAAAAGaagtaag > 2:2594757/1‑150 (MQ=11) gaTATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑TGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAagtaagta > 2:1465078/1‑150 (MQ=2) tataGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGaa > 1:2129237/1‑150 (MQ=11) tataGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGACTCTAAGGAAAGACACTCCTTCACCTGGAATGGAAAACTAAAAA‑CAAAACAAACAACACAAGAAAGAAGGACAGGaa > 2:1790683/1‑150 (MQ=2) tataGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TAAAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAACCAAGAG‑CAAAAAAAATAGCACAAGaagtaagcccaggac > 1:2786432/1‑142 (MQ=11) tataGAAGGAAGAATAGAATTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑CACAGGATTCAGT‑AAATTCCAAGGAAAGACACCCTTCAACTTGGAATGGAAAACCAAGAG‑CAAGACAAACAGCACAAGAAGCAAGTACAGGaa > 1:2786437/1‑150 (MQ=11) aggaagAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTaa > 2:545146/1‑150 (MQ=11) aggaagAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTaa > 1:3524674/1‑150 (MQ=11) aggaagAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTaa > 2:675444/1‑150 (MQ=11) aggaagAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTaa > 2:887678/1‑150 (MQ=11) aagaaTAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGAc > 2:579779/1‑150 (MQ=11) gACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCaa > 1:3465371/1‑150 (MQ=17) aCTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCaaa > 1:335889/1‑150 (MQ=18) cTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAaag > 1:1936689/1‑150 (MQ=18) ttGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAaagaa > 1:2901224/1‑150 (MQ=18) gATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAagaaga > 2:2288093/1‑150 (MQ=18) gATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAagaaga > 2:2288094/1‑150 (MQ=18) gATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAagaaga > 1:1479153/1‑150 (MQ=18) aTTTATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAgaagaa > 2:2995899/1‑150 (MQ=21) tttATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAAt > 1:1653562/1‑150 (MQ=25) tttATTAAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAAt > 1:2513451/1‑150 (MQ=25) ttattaAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATc > 2:796603/1‑150 (MQ=25) attaAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCaa > 2:1528419/1‑150 (MQ=37) ttaAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCaaa > 1:142220/1‑150 (MQ=37) ttaAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCaaa > 1:2140866/1‑150 (MQ=37) taAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCaaaa > 2:2702054/1‑150 (MQ=37) taAAGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCaaaa > 2:1682311/1‑150 (MQ=37) aGCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATCCTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAAt > 1:1581431/1‑150 (MQ=255) gCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAAtt > 1:1527029/1‑150 (MQ=37) gCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAAtt > 1:453062/1‑150 (MQ=37) gCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGAAAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAAtt > 1:2949696/1‑150 (MQ=255) gCAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAAATTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAAtt > 2:3409523/1‑150 (MQ=255) cAAATTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAATTg > 2:200005/1‑150 (MQ=37) aaaTTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAATTgg > 2:411107/1‑150 (MQ=37) aaTTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGGCCAGCCAAAGAAGAATCAAAAAATTggg > 1:3030157/1‑150 (MQ=255) aaTTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAATTggg > 1:3030158/1‑150 (MQ=37) aaTTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAATTggg > 1:240800/1‑150 (MQ=37) aaTTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAATTggg > 1:240801/1‑150 (MQ=37) aTTTTAGTTAGGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAATTGGGa > 2:1831761/1‑150 (MQ=255) ttttatttagggggggtgTACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAATTGGGata < 2:2503647/141‑1 (MQ=255) agttagGGGGGGGGG‑TACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTACCTTGGACTGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAATTGGGataata > 1:189948/1‑150 (MQ=255) gttaggggggggggTACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAATTGGGATAATAc > 2:3394019/5‑150 (MQ=255) gttaggggggggggTACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAATTGGGATAATAc > 2:2925286/5‑150 (MQ=255) gttaggggggggggTACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAATTGGGATAATAc > 2:2925282/5‑150 (MQ=255) ggggggTACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAATTGGGATAATACAGAAAata > 1:3502656/1‑150 (MQ=39) cagTACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTA‑AGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAATTGGGATAATACAGAAAATATCta < 2:1482040/148‑1 (MQ=255) | GTAGAAAATGGAAAAGTTAGATGGAACTAGTATGAATTTAGTTCAAGAAAATATTAAAAAGTTAAAAGAAATTTTTCCAGAGATATTTATAGAAGGAAGAATAGACTTTGATTTATTAAAGCAAATTTTAGTTAGGGGGGGGGGGTACAGGATTTAGT‑AGATTCTAAGGAAAGATACTCTTTAACTTGGAATGGAAAATCAAGAG‑CAAGACAAATAGCACAAGAAGTAAGTACAGGAACATTAAGACCAGCCAAAGAAGAATCAAAAAATTGGGATAATACAGAAAATATCTA > CP028101/1054078‑1054370 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |