| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Xen36_18 | 3,935 | 0 | A | C | 43.6% | 106.3 / 42.7 | 103 | S56S (TCA→TCC) | Xen36_02552 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (14/43); new base C (44/0); total (60/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.22e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 110 total aligned reads displayed.
TTAAGACAAGAATTGGTATTGATGATGAGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAGTGTGTTAAATAATTTATATTTTAAAGATGACAAAAAGGGATTTGTACA > Xen36_18/3787‑4084 | ttAAGACAAGAATTGGTATTGATGATGAGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTGGCAATGTTACCTACAATCGAAGATAGAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTcaa < 1:2829008/150‑1 (MQ=255)ttAAGACAAGAATTGGTATTGATGATGAGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTGGCAATGTTACCTACAATCGAAGATAGAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTcaa < 1:888498/150‑1 (MQ=255) tAAGACAAGAATTGGTATTGATGATGAGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTcaac < 1:610458/150‑1 (MQ=255) tAAGACAAGAATTGGTATTGATGATGAGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTcaac > 1:2048609/1‑150 (MQ=255) aGACAAGAATTGGTATTGATGATGAGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACTTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTcaacaa > 1:140603/1‑150 (MQ=255) aGACAAGAATTGGTATTGATGATGAGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACTTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑ATTTccacaa > 1:140605/1‑150 (MQ=255) aGAATTGGTATTGATGATGAGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAgg < 1:3226185/150‑1 (MQ=255) tgatgatgaGCAACAAGATGGACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGtat < 1:3395669/150‑1 (MQ=255) tgatgatgaGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTTAACAAAAAAGTATCACCGtac > 1:2089300/1‑149 (MQ=255) tgatgatgaGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GGTTCCACAAAAAAGTATAACCGtat > 1:1707519/1‑150 (MQ=255) gatgatgaGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACAAAAAAGTATAACCGtata > 1:2072903/1‑150 (MQ=255) atgatgaGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAAAGTTTCAAAAAAAAGG‑ATAACCGCATAg > 1:295528/1‑150 (MQ=255) atgatgaGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACaaaaaaatgtcaccgtatag > 1:2317367/1‑135 (MQ=255) atgatgaGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACAAAAAGGTATAACCGtacga > 1:2317368/1‑147 (MQ=255) atgatgaGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACAAAAAAGTATCACCGTATAg > 1:2317369/1‑150 (MQ=255) atgatgaGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCACCAAAAAGGTATAACCatatca > 1:2317371/1‑148 (MQ=255) gatgaGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGt < 1:438810/150‑1 (MQ=255) gCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTTCACAAAAAAGTATCAccatctcggttctga > 1:625326/1‑137 (MQ=255) aacaaGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACAAAAAAGTGTCACCGTCTAGGTGC‑TGAAg > 1:1971055/1‑150 (MQ=255) caaGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GGGTCACCAAAAAAACATAACCATATCGGTGC‑Tgccgac > 1:598390/1‑145 (MQ=255) caaGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACAAGAAGAAATTGAGTTTATAGTAGTGGAA‑GCTTTGACAAAAAGATATAACCATCTAGGTGC‑TGAAgat > 1:598393/1‑148 (MQ=255) aaGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGGA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTa < 1:2766915/150‑1 (MQ=255) aaGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGGA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTa < 1:680356/150‑1 (MQ=255) gATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATg < 1:1545666/150‑1 (MQ=255) aaCAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACAAAAAAGTATAACCGTATAGGTGC‑TGAAGGTactacat > 1:2151167/1‑144 (MQ=255) aaCAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑ATTTCCACAAAAAAGTATCACCGTATAGGTGC‑TGAAAGTATGACAt > 1:315828/1‑150 (MQ=255) aCAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACAAAAAGGTATAACCGTATAGGTGC‑TGAAAGTATGACacc > 1:2443260/1‑148 (MQ=255) aCAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAAGTATCACCGTATCGGTGC‑TGAAGGTGTGACATc > 1:2443259/1‑150 (MQ=255) cAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACacct < 1:244042/150‑4 (MQ=255) aaaaGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCTATGTTACCTACAATCGAAGATACAATACCAGAAGAGATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAac < 1:2536121/150‑1 (MQ=255) aaaaGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAac < 1:3377859/150‑1 (MQ=255) aaaaGGTATTATTAGTAATGGCGAAAAAGAATTATTAGTTAGGTTACCGATAATAGAAGATACAATACCAGAAGAGATTGAGTTCAGATTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAac < 1:2536122/150‑1 (MQ=255) aaGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGGGTTTATAGTAGTGGAA‑GTTTTCACAAAAAAGGGTAACCCTACAGGTGC‑CTAAGGTATGACACCTg > 1:2225453/1‑144 (MQ=255) aaGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGGGTTTATAGTAGTGGAA‑GGTTCCACAAAAAAGTATCACCGTATCGGTGC‑TGAAGGTATGACACCTGaaaaac > 1:2225452/1‑147 (MQ=255) aaGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGGGTTTATAGTAGTGGAA‑ATTTCCACAAAAAAGTATCACCATATAGGTGC‑TGAAGGTATGACACCTGAAacac > 1:2225450/1‑150 (MQ=255) gTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAg < 1:3723524/150‑1 (MQ=255) gTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAAGTATAAACGTATCGGTGC‑TGAAGGTATGACATCTGAAAcacaa > 1:3367994/1‑149 (MQ=255) tattattaGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTTCCCAAAAAGGTATAACCGTCTCGGTGC‑TGAAAGTGTTACATCTTAcacacaaga > 1:1222003/1‑147 (MQ=255) attattaGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGCGTTTATAGTAGTGGAA‑GTTTCCACAAAAAGATATAACCATATAGGTGC‑TTAAAGTCTTACATCCCAAACACAGGAt > 1:1783873/1‑150 (MQ=255) attattaGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGCGTTTATAGTAGTGGAA‑GTTTCAACAAAAAAGTATAACCGTATCGGTGC‑TGAAAGTATGAAATCTGAAACACAAGAt > 1:1783870/1‑150 (MQ=255) tattaGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGCGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATgg < 1:1529774/150‑1 (MQ=255) attaGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTTCACAAAAAAGTACAACCGTATAGGTGC‑TGAAGGTATGACACCTGAAACACAGGATGGt > 1:86280/1‑150 (MQ=255) attaGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGt > 1:86281/1‑150 (MQ=255) taGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCg < 1:3076732/150‑1 (MQ=255) taGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCg < 1:1829857/150‑1 (MQ=255) tGTTGAAAAAGAATTATTAGCAATGTTATCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACCAAAAAGTATAAACGTATCGGTGC‑TGAAGGTATGACACCTGAAACACAAGATGGTCATTCtcg > 1:2135696/1‑148 (MQ=255) tGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCtagtag < 1:231630/150‑1 (MQ=255) gAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTagtagt < 1:1694151/150‑1 (MQ=255) aaaaaGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACCAAAAAGTATAACCGTATAGGTGC‑TTAAGGTATGACATCCGAAAAACAAGAGGGTCGTTCTCGTAGtt > 1:1372947/1‑150 (MQ=255) aaaaaGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACAAAAAAGTGTCACCATATAGGTGC‑TGAAGGTATGACATCTTAAAAACAGGATGGTCTTTCTAGTCGtt > 1:397040/1‑150 (MQ=255) aaaaaGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGtt < 1:3528202/150‑1 (MQ=255) aaaaaGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GGTTCCACAAAAAGGTATAACCGTATCGGTGC‑TGGAGGTATGACATCTGAAAAACAAGATGGTCGTTCTAGTAGtt > 1:397041/1‑150 (MQ=255) aaaaaGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GGTTCAACAAAAAAGTATAAACGTATAGGTGC‑TGAAGGGATGACACCTTAAACACAGGATGGTCTTTCTCGTAGtt > 1:397043/1‑150 (MQ=255) aaaGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTAt < 1:1030210/150‑1 (MQ=255) aaGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATg < 1:2178107/150‑1 (MQ=255) aaTTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAAt < 1:941834/150‑1 (MQ=255) attattAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑ATTTCCACAAAAAAGGATCACCATATAGGTGC‑TTGAGGTGTTACACCTTAAACACAAGATGGTCGTTCtcgtcgttcttaact > 1:1576000/1‑136 (MQ=255) attaGCAGTGTTACCTACAATCGAAGATACAATACCATAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTaaa < 1:2010450/150‑1 (MQ=255) attaGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTTCACAAAAAAGTATCACCGTCTATGTGCCTCAAG‑TCCGACATCTGAAACACAAGATGGTCGTTCTCGTCGTTACGaactcaa > 1:687070/1‑145 (MQ=255) attaGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTaaa < 1:2010451/150‑1 (MQ=255) ttaGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAAt < 1:2778409/150‑1 (MQ=255) ttaGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAAt < 1:2769949/150‑1 (MQ=255) ttaGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAAt < 1:714566/150‑1 (MQ=255) ttaGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAAt < 1:696188/150‑1 (MQ=255) aGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACAAAAAGGTATGACCGTAGAGGTGC‑TGAAGGTATGACACCTGAAAAACAAGAGGGTCGTTTTCGTAGTTCTTAATTCAATGa > 1:1969088/1‑150 (MQ=255) gCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACAAAAAAGTATCACCGTATAGGTGC‑TTAAAGTGTTACATCTTCAACACAAGATGGTCGTTCTCGTAGTTCTGAATTAAACGAt > 1:748703/1‑150 (MQ=255) aaTGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACAAAAAAGTATAACCGTATAGGTGC‑TTAAGGTCTGACACCTTAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAACGAttt > 1:1155330/1‑150 (MQ=255) tACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTTCACAAAAAAGTATAACCGTATAGGTGC‑TGAAGGTCTGAAATCTGAAAAAGAGGATGGTCGTTCTCGTAGTTGTGAACTaaacgacttttatg > 1:2055781/1‑139 (MQ=255) tACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTtgatg < 1:3285183/150‑1 (MQ=255) tACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑ATTTCAACAAAAAAGTGTAACCATATAGGTGG‑TGAAGGTATGCCATCTGAAACACAGGATGGTCGTTCTCGTAGTTCTGAAttccacgatttttatg > 1:2055777/1‑136 (MQ=255) ccTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑ATTTCCACAAAAAGGTATCACCATATAGGTTC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTCGTAGTTCTGAATTCAACGATTTTGATGaa > 1:3685547/1‑150 (MQ=255) tACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACTGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAAtt < 1:905682/132‑1 (MQ=255) aaTCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑ATTTTCACAAAAAAGTATAACCGTCTAGGTGC‑TTAAGGTATGACACCTTAAACACAAGATGGTCGTTCTAGTAGTTCTGAACTCAATGATTTTTATTAatatca > 1:2207441/1‑148 (MQ=255) aTCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACAAAAAAGTATAACCATACAGATGC‑TTACAGTCTGACACCCGAAAAAAAGGATGGTCTTTTTCTTAGCTGTGCATTAAATAATTTTGATGaacacaaa > 1:2174657/1‑144 (MQ=255) aTCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATaaa < 1:996722/150‑1 (MQ=255) aTCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑ATTTCCACCAAAAAGTATCACCGTCTCGGTGC‑TGAAGGTATGACATCTTAAACACAGGATGGTCGTTTTCGTCGTTATTAACTAAACGATTTTTATGAatatcaa > 1:2174660/1‑147 (MQ=255) aTCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑ATTTCCACAAAAAAGTATAACCATATCGGTGC‑TGAAGGTATGACACCTGAAAAACAAGATGGTCGTTCTCGTAGTTCTGAACTCAATGATTTTGATGAatatcaa > 1:2257111/1‑147 (MQ=255) aTCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑ATTTCCACAAAAAAGTACCACAATACAGGTGC‑TGAAGGTATGACATCTTCAACACCAGATGGTCGTTCTCGTAGTTGTGAACTCAATGATTTTTATGAATATaaa > 1:2174661/1‑150 (MQ=255) gAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACAAAAAAGTATCACCATCTCGGTGC‑TTAAGGTCTGACCTCCTAAACACAAGATGGTCGTTCTCGTCGTTCTTAATTCAACGATTTTTATGAATATcaaaat > 1:159004/1‑148 (MQ=255) gAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACAAAAAAGTATAACCATCTAGGTGC‑TGAAGGTATGACATCTTAAACACAAGATGGTCGTTCTCGTAGTTCTGAATTCAATGATTTTTATGAATATaaaaat > 1:1337884/1‑148 (MQ=255) gAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCATATCGGTGC‑TGAAGGTATGACCTCTTAAACACAAGATGGTTGTTCTCGTAGTTATTAATTAAACGATTTTGATGAATATaaaaat > 1:1553167/1‑148 (MQ=255) gAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑ATTTCCACAAAAAGGTATCACCGTACAGGTGC‑TGAAGGTATGACATCTTAAAAACAGGATGGTCTTTCTCGTAGTTCTGAATTCAATGATTTTGATGAATATCAAAgt > 1:57913/1‑150 (MQ=255) aaGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAgtg < 1:3745580/150‑1 (MQ=255) aaGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAgtg < 1:3297904/150‑1 (MQ=255) tACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCAAAAAAAAGTATCACCATATCGGTGC‑TGAAGGGATGACATCTGAAACACAGGATGGTCGTTCTCATAGTTATGAATTAAATGACTTTGATGAATATGAAAGTGTGtt > 1:2235608/1‑150 (MQ=255) tACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GGTTCCACAAAAAAACATCACCCTCCAGGTGC‑TTAAAGTATGACACCTGAAACACCAAACGGTCGTTCTCGTGGTTGTGCATTAAACAATTTTGATGAAtatacaaaggtgtt > 1:2235613/1‑140 (MQ=255) aCAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCCACAAAAAAGTATCACCATCTAGGTGC‑TGAAGGTATGACATCTGAAAAACAGGATGGTCTTTCTCGTCTTTCTGCATTCAATGATTTTTATGAATCCCAAAGTGTGttc > 1:3675874/1‑149 (MQ=255) cAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAGTGTGTTaa < 1:391196/150‑1 (MQ=255) ccAGAAGAAAGTGAGTTCATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTGCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAGTGTGTTAagtaat < 1:3239500/150‑1 (MQ=255) agaagaAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAGTGTGTTAAATAAttt < 1:3382296/150‑1 (MQ=255) gaagaaATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAGTGTGTTAAATAATTta < 1:766115/150‑1 (MQ=255) aaaTTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAGTGTGTTAAATAATTTATAtt < 1:1874883/150‑1 (MQ=255) ttGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAGTGTGTTAAATAATTTATATTTTa < 1:696338/150‑1 (MQ=255) aGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAGTGTGTTAAATAATTTATATTTTAAAg < 1:654709/150‑1 (MQ=255) gTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAGTGTGTTAAATAATTTATATTTTAAAGa < 1:1345931/150‑1 (MQ=255) agtGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAGTGTGTTAAATAATTTATATTTTAAAGATGAc > 1:3651219/1‑145 (MQ=255) tttCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAGTGTGTTAAATAATTTATATTTTAAAGATGACAAAAAGGGATTTg < 1:978045/150‑1 (MQ=255) ttCAACAAAAAGGTATAATCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAGTGTGTTAAATAATTTATATTTTAAAGATGACAAAAAGGGATTTGt > 1:3544891/1‑150 (MQ=255) ttCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAGTGTGTTAAATAATTTATATTTTAAAGATGACAAAAAGGGATTTGt > 1:3330464/1‑150 (MQ=255) aacaaAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAGTGTGTTAAATAATTTATATTTTAAAGATGACAAAAAGGGATTTGTACa > 1:2039835/1‑150 (MQ=255) | TTAAGACAAGAATTGGTATTGATGATGAGCAACAAGATGAACAATTAAAAGTTATTATTAGTAATGTTGAAAAAGAATTATTAGCAATGTTACCTACAATCGAAGATACAATACCAGAAGAAATTGAGTTTATAGTAGTGGAA‑GTTTCAACAAAAAGGTATAACCGTATAGGTGC‑TGAAGGTATGACATCTGAAACACAGGATGGTCGTTCTAGTAGTTATGAATTAAATGATTTTGATGAATATAAAAGTGTGTTAAATAATTTATATTTTAAAGATGACAAAAAGGGATTTGTACA > Xen36_18/3787‑4084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |