Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*Xen36_161700AT48.4% 64.8 / 277.7 192intergenic (+4/‑2)Xen36_02456/Xen36_02457tRNA‑Thr(tgt)/tRNA‑Lys(ttt)
Reads supporting (aligned to +/- strand):  ref base A (47/51);  new base T (45/47);  total (92/100)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 193 total aligned reads displayed.

AGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACCATTTATTCTTACATATTGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGATCTAGCGCCTTACGGCGTGGGGGTT  >  Xen36_16/21‑314
                                                                                                                                                      |                                                                                                                                                
  cATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACCATTTATTCTTACATATTGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAag                                                                                                                                                <  1:1343676/150‑1 (MQ=255)
          ttACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACCATTTATTCTTACATATTGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTa                                                                                                                                        >  1:319580/1‑150 (MQ=255)
                       gTCGGCGGTTCGAACCCGTCATTCTCCACCATTTATTCTTACATATAGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTa                                                                                                                            >  1:1878564/1‑150 (MQ=18)
                          ttcggTTCGAACCCGTCATTCTCCACCATTTATTCTTACATATAGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTagag                                                                                                                         <  1:3398375/148‑1 (MQ=18)
                            cggTTCGAACCCGTCATTCTCCACCATTTATTCTTACATATAGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCa                                                                                                                       <  1:612123/150‑1 (MQ=18)
                             ggTTCGAACCCGTCATTCTCCACCATTTATTCTTACATATTGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATc                                                                                                                     <  1:1303257/150‑1 (MQ=255)
                              gTTCGAACCCGTCATTCTCCACCATTTATTCTTACATATTGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCt                                                                                                                    <  1:2213193/150‑1 (MQ=255)
                              gTTCGAACCCGTCATTCTCCACCATTTATTCTTACATATAGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATc                                                                                                                     >  1:2794673/1‑150 (MQ=18)
                              gTTCGAACCCGTCATTCTCCACCATTTATTCTTACATATAGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATc                                                                                                                     >  1:760890/1‑150 (MQ=18)
                               ttCGAACCCGTCATTCTCCACCATTTATTCTTACATATTGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACGAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTg                                                                                                                   >  1:401302/1‑150 (MQ=255)
                               ttCGAACCCGTCATTCTCCACCATTTATTCTTACATATAGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCt                                                                                                                    >  1:1421788/1‑150 (MQ=18)
                                 cGAACCCGTCATTCTCCACCATTTATTCTTACATATAGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGa                                                                                                                  >  1:1901063/1‑150 (MQ=18)
                                    aCCCGTCATTCTCCACCATTTATTCTTACATATAGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACtt                                                                                                               >  1:3336488/1‑150 (MQ=18)
                                       cGTCATTCTCCACCATTTATTCTTACATATAGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTa                                                                                                            >  1:1852486/1‑150 (MQ=18)
                                        gTCATTCTCCACCATTTATTCTTACATATTGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAAt                                                                                                          <  1:1132982/150‑1 (MQ=255)
                                               tcCACCATTTATTCTTACATATAGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAgg                                                                                                    <  1:3436891/150‑1 (MQ=18)
                                                ccactaTTTATTCTTACATATTGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGt                                                                                                  >  1:256875/1‑150 (MQ=255)
                                                ccaccaTTTATTCTTACATATTGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCCGACTTTTAATCAGAGGGt                                                                                                  >  1:495971/1‑150 (MQ=255)
                                                ccaccaTTTATTCTTACATATAGCCGGCCTAGCTCAATTGTTAGAGCAACTGACTTGTAATCAGTAGGTGGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAggg                                                                                                   <  1:1591468/150‑1 (MQ=18)
                                                   ccaTTTATTTTTACATATTGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCag                                                                                               <  1:2043483/150‑1 (MQ=255)
                                                   ccaTTTATTCTTACATATTGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCag                                                                                               <  1:3118049/150‑1 (MQ=255)
                                                   ccaTTTATTCTTACATATTGCCGGCCTAACTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCag                                                                                               <  1:2043487/150‑1 (MQ=255)
                                                       ttATTCTTACATATTGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGt                                                                                           >  1:3026189/1‑150 (MQ=255)
                                                       ttATTCTTACATATAGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAgg                                                                                            <  1:1891467/150‑1 (MQ=18)
                                                          ttCTTACATATTGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCGGAGGTTCg                                                                                        <  1:1546163/150‑1 (MQ=255)
                                                          ttCTTACATATAGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTc                                                                                         <  1:259813/150‑1 (MQ=18)
                                                            cTTACATATAGCCGGCCTAGCTCAATTGGCAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGa                                                                                       >  1:3056823/1‑150 (MQ=18)
                                                            cTTACATATAGCCGGCCTAGCTCAATTGGCAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGa                                                                                       >  1:3056822/1‑150 (MQ=18)
                                                             ttACATATTGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAAt                                                                                     <  1:30006/150‑1 (MQ=255)
                                                              tACATATTGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATc                                                                                    >  1:3231776/1‑150 (MQ=255)
                                                                cATATAGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATcc                                                                                   >  1:821964/1‑150 (MQ=18)
                                                                cATATAGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATcc                                                                                   <  1:3443258/150‑1 (MQ=18)
                                                                cATATAGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATcc                                                                                   <  1:3306328/150‑1 (MQ=18)
                                                                 atatTGCCGGCCTGGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCctc                                                                                 <  1:799134/150‑1 (MQ=255)
                                                                    tagCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCAGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTa                                                                               >  1:3680752/3‑150 (MQ=18)
                                                                     agCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTAt                                                                              <  1:2132715/149‑1 (MQ=18)
                                                                      gCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATCAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGATCAGAGGTTCGAATCCTCTATg                                                                             >  1:386177/1‑150 (MQ=18)
                                                                       ccGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGc                                                                           >  1:3720636/1‑150 (MQ=255)
                                                                        cGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCt                                                                          >  1:1904848/1‑150 (MQ=255)
                                                                        cGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGAGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGc                                                                           <  1:3380854/150‑1 (MQ=21)
                                                                           ccTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCa                                                                        >  1:1432676/1‑150 (MQ=21)
                                                                           ccTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACGTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCa                                                                        >  1:1147444/1‑150 (MQ=21)
                                                                               gCTCAATTGGTATAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCAtt                                                                   <  1:3590517/150‑1 (MQ=255)
                                                                               gCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttac                                                                    <  1:1698260‑M1/150‑5 (MQ=255)
                                                                                  cAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAATTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgat                                                                 <  1:1635287‑M1/150‑8 (MQ=255)
                                                                                  cAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgat                                                                 >  1:3133861‑M1/1‑143 (MQ=255)
                                                                                  cAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgat                                                                 <  1:1319542‑M1/150‑8 (MQ=255)
                                                                                   aaTTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatt                                                                >  1:1458780‑M1/1‑142 (MQ=255)
                                                                                     ttGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCggg                                                             <  1:1177055/150‑1 (MQ=255)
                                                                                      gggtAGAGCAGCCGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaa                                                             <  1:2018997‑M1/149‑12 (MQ=255)
                                                                                       ggTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaat                                                            >  1:1920021‑M1/1‑138 (MQ=255)
                                                                                       ggTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaat                                                            >  1:1735172‑M1/1‑138 (MQ=255)
                                                                                         tAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaattt                                                          <  1:3067503‑M1/150‑15 (MQ=255)
                                                                                         tAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaattt                                                          <  1:721391‑M1/150‑15 (MQ=255)
                                                                                           gagCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGc                                                       >  1:521806/1‑150 (MQ=255)
                                                                                            agCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaattttta                                                       <  1:2469692‑M1/150‑18 (MQ=255)
                                                                                              cAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaatttttata                                                     >  1:3573841‑M1/1‑131 (MQ=255)
                                                                                               aaCTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaat                                                            <  1:2913236‑M1/142‑13 (MQ=255)
                                                                                               aaCTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaat                                                            <  1:1163505‑M1/142‑13 (MQ=255)
                                                                                                aCTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAAt                                                  <  1:2083770/150‑1 (MQ=255)
                                                                                                 cTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAAtt                                                 <  1:1212911/150‑1 (MQ=255)
                                                                                                    aCTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGc                                              <  1:3577084/150‑1 (MQ=255)
                                                                                                      ttGTAATCAGTAGTTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAg                                            <  1:2305592/150‑1 (MQ=255)
                                                                                                       tGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGa                                           >  1:1306890/1‑150 (MQ=255)
                                                                                                        gTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaatttttatatttagcaaaa                                           >  1:2065187‑M1/1‑121 (MQ=255)
                                                                                                        gTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTAAttacgatttaatttttatatttagcaaaa                                           <  1:888320‑M1/150‑30 (MQ=255)
                                                                                                          aaTCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGc                                        >  1:2226846/1‑150 (MQ=255)
                                                                                                          aaTCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAACCAGGGGGTCAGAGGCTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGc                                        >  1:2226843/1‑150 (MQ=255)
                                                                                                           aTCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCa                                       >  1:1388181/1‑150 (MQ=255)
                                                                                                           aTCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCa                                       >  1:1132788/1‑150 (MQ=255)
                                                                                                             cAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaatttttatatttagcaaaataatg                                      <  1:2805041‑M1/150‑35 (MQ=255)
                                                                                                             cAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaatttttatatttagcaaaataatg                                      <  1:3084529‑M1/150‑35 (MQ=255)
                                                                                                                tAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaatttttatatttagcaaaataatgcag                                   <  1:1673724‑M1/150‑38 (MQ=255)
                                                                                                                 aGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCGTCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaatttttatatttagcaaaataatgcaga                                  >  1:959106‑M1/1‑112 (MQ=255)
                                                                                                                 aGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCGGACGCACTAGAc                                 <  1:422760/150‑1 (MQ=255)
                                                                                                                   gTTGGGGGTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttaagatttaatttttatatttagcaaaataatgcagaag                                >  1:3215724‑M1/1‑110 (MQ=255)
                                                                                                                   gTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACtt                               >  1:1638273/1‑150 (MQ=255)
                                                                                                                    ttGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACTTa                              >  1:2787617/1‑150 (MQ=255)
                                                                                                                     tGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACTTAg                             <  1:911006/150‑1 (MQ=255)
                                                                                                                      gggggTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACTTAgg                            <  1:671055/150‑1 (MQ=255)
                                                                                                                      gggggTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACTTAgg                            <  1:2763256/150‑1 (MQ=255)
                                                                                                                       ggggTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaatttttatatttagcaaaataatgcagaagtagt                            >  1:468904‑M1/1‑106 (MQ=255)
                                                                                                                       ggggTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATAAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGa                           >  1:616861/1‑150 (MQ=255)
                                                                                                                        gggTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaatttttatatttagcaaaataatgcagaagtagtt                           <  1:698265‑M1/150‑46 (MQ=255)
                                                                                                                         ggTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaatttttatatttagcaaaataatgcagaagtagttc                          >  1:938282‑M1/1‑104 (MQ=255)
                                                                                                                         ggTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGATc                         >  1:299220/1‑150 (MQ=255)
                                                                                                                          gTTCCAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaatttttatatttcgcaaaataatgcagaagtagttca                         >  1:1508095‑M1/1‑103 (MQ=255)
                                                                                                                          gTTCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGATTCGAATCCTCTATGGCTCAtcacgatttaatctttatatttagcaaaatactgcagaagtagttca                         >  1:1441844‑M1/1‑103 (MQ=255)
                                                                                                                          gTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGATCt                        >  1:266262/1‑150 (MQ=255)
                                                                                                                          gTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGATCt                        <  1:842380/150‑1 (MQ=255)
                                                                                                                            tCAAGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaatttttatatttagcaaaataatgcagaagtagttcagc                       >  1:3385149‑M1/1‑101 (MQ=255)
                                                                                                                             cAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGATCTAgc                     <  1:141313/150‑1 (MQ=255)
                                                                                                                             cAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGA‑TTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGATCTAgcg                    >  1:732433/1‑150 (MQ=255)
                                                                                                                              aaGTCCTCTGGCCGGCACCATCTTTTGAGCCATTAGCTCAGCTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCAttacgatttaatttttatatttagcaaaataatgcagaagtagttcagcgg                     <  1:3611464‑M1/150‑52 (MQ=255)
                                                                                                                                  ccTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGAGGAATTGGCAGACGCACTAGACTTAGGATCTAGCACCtt                >  1:2117458/1‑150 (MQ=255)
                                                                                                                                   ctctGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGATCTAGCGCCTTa               >  1:1963373/1‑150 (MQ=255)
                                                                                                                                       ggCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTAGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGATCTAGCGCCTTACGGc           <  1:681227/150‑1 (MQ=255)
                                                                                                                                              aCCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGATCTAGCGCCTTACGGCGTggggg    <  1:2143952/150‑1 (MQ=255)
                                                                                                                                               ccAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGATCTAGCGCCTTACGGCGTGGGGGt   >  1:12908/1‑150 (MQ=255)
                                                                                                                                                cAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGATTTAGGATCTAGCGCCTTACGGCGTGGGGGtt  >  1:1493690/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                
AGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACCATTTATTCTTACATATTGCCGGCCTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGTCCTCTGGCCGGCACCAT‑GGAAGAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAATCCTCTATGGCTCACCATTTGCGGGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGATCTAGCGCCTTACGGCGTGGGGGTT  >  Xen36_16/21‑314

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑