Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*Xen36_121250AT39.8% 452.0 / inf 633intergenic (–/+496)–/gabR–/HTH‑type transcriptional regulatory protein GabR
Reads supporting (aligned to +/- strand):  ref base A (195/180);  new base T (133/115);  total (334/299)
Fisher's exact test for biased strand distribution p-value = 7.43e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 684 total aligned reads displayed.

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGTGAGAGCCGAAGAAGAGGAAAGAAGCAAGCGATTGTCACAAGACAAG  >  Xen36_12/1‑273
                                                                                                                                                  |                                                                                                                                                    
gtaggtcacacctgttcccatgCCGAACACAGAAGTTAAGCTCCTTAGCATCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTaaaaa                                                                                                                                                   >  1:2012264‑M1/23‑150 (MQ=255)
         agaagttaagctccttagcgtcgatggtagtcgaacttacgttccgctagagtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAacgtcaaaataaaagttaacacaa                                                                                                                                          >  1:1094656‑M2/93‑140 (MQ=255)
           aagttaagctccttagcgtcgatggtagtcgaacttacgttccgctagagtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAaaacgtcaaaataaaagttaacacaaag                                                                                                                                        <  1:1203075‑M2/60‑13 (MQ=255)
            agttaagctccttagcgtcgatggtagtcgaacttacgttccgctagagtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTaaaacgtcaaaataaaagttaacacaaaga                                                                                                                                       >  1:31203‑M2/90‑137 (MQ=255)
              ttcccatgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGa                                                                                                                                     >  1:1136019‑M1/9‑150 (MQ=255)
                cccatgCCGAACAAAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGCCTCTTTTTTTACGTCTACAATGtcaaagtaaaaattaacac                                                                                                                                            <  1:1057613‑M1/135‑8 (MQ=255)
                 ccatgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAaagaaaaaac                                                                                                                                          <  1:3496037‑M1/137‑4 (MQ=255)
                  gctccttagcgtcgatggtagtcgaacttacgttccgctagagtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTNTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATg                                                                                                                               >  1:3554690‑M2/84‑150 (MQ=255)
                     gCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTACGTCTAAAATGTCAAAGTAAAAATTAA‑‑CACAAAGAAAAATGGCt                                                                                                                            <  1:2489473‑M1/149‑1 (MQ=255)
                        gAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAAAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTACGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCtcgg                                                                                                                         >  1:894356/1‑147 (MQ=21)
                         tcacaagacaagaaaggttcttagcgacgatggtagccAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAATTAA‑‑CACAAAGAAAAATGGCTTGGc                                                                                                                        >  1:1945423‑M1/39‑150 (MQ=255)
                         agcgtcgatggtagtcgaacttacgttccgctagagtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGc                                                                                                                        <  1:3621599‑M2/74‑1 (MQ=255)
                          acacAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTACGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCg                                                                                                                       <  1:3043290/150‑1 (MQ=25)
                                 aGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTg                                                                                                                  <  1:1591693/150‑1 (MQ=255)
                                  ggtagtcgaacttacgttccgctagagtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGaaa                                                                                                               <  1:3397849‑M2/83‑1 (MQ=255)
                                   ttAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGTTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTACGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGaaaa                                                                                                              <  1:928728/150‑1 (MQ=25)
                                    gaaaggttcttagcgacgatggtagccAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAATTAA‑‑CACAAAGAAAAATGGCTTGGCGAAGTGAAAAc                                                                                                             <  1:3704099‑M1/123‑1 (MQ=255)
                                     agtcgaacttacgttccgctagagtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACg                                                                                                            >  1:1554812‑M2/65‑150 (MQ=255)
                                      gtcgaacttacgttccgctagagtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGt                                                                                                           >  1:1164335‑M2/64‑150 (MQ=255)
                                       gccaacttacgttccgctagagtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGTGAAGTGAAAACGtt                                                                                                          >  1:1974557‑M2/63‑150 (MQ=255)
                                       gCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACg                                                                                                            <  1:597122/150‑1 (MQ=255)
                                         tCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTACGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTg                                                                                                        <  1:2843096/150‑1 (MQ=37)
                                         caacttacgttccgctagagtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTg                                                                                                        <  1:819479‑M2/90‑1 (MQ=255)
                                           tcttagcgacgatggtagccAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAATTAA‑‑CACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGaa                                                                                                      >  1:293379‑M1/21‑150 (MQ=255)
                                           cTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAGAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTg                                                                                                        <  1:1850882/150‑1 (MQ=255)
                                           cTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTg                                                                                                        <  1:1790333/150‑1 (MQ=255)
                                             ttacgttccgctagagtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGATCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATc                                                                                                    <  1:441947‑M2/94‑1 (MQ=255)
                                             tAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGACTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTACGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACgctt                                                                                                         <  1:536754/145‑4 (MQ=37)
                                               agcgacgatggtagccAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGTAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCaaagtaaaaattaac                                                                                                                                              >  1:690027‑M1/17‑103 (MQ=255)
                                               agcgacgatggtagccAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAGAGTAAAAATTAA‑‑CACAGAGAAAAATGGCGTGGCGAAGTGCAAACATTTGAATCTg                                                                                                  <  1:167445‑M1/134‑1 (MQ=255)
                                               acgttccgctagagtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTg                                                                                                        <  1:2048706‑M2/90‑1 (MQ=255)
                                                cgttccgctagagtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGa                                                                                                 <  1:665464‑M2/97‑1 (MQ=255)
                                                 cgacgatggtagccAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAATTAA‑‑CACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGAc                                                                                                <  1:1409483‑M1/136‑1 (MQ=255)
                                                 cgacgatggtagccAACTTACGTTCCGCTAGAGTAAAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAATTAA‑‑CACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGAc                                                                                                >  1:2991635‑M1/15‑150 (MQ=255)
                                                     cgctagagtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGaaa                                                                                            >  1:1001251‑M2/49‑150 (MQ=255)
                                                      gctagagtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCCCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAAc                                                                                           >  1:707174‑M2/48‑150 (MQ=255)
                                                         tAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTACGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACgag                                                                                        <  1:1524434/150‑1 (MQ=38)
                                                          gagtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGTTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACaaga                                                                                       <  1:3605282‑M2/107‑1 (MQ=255)
                                                           agtagaacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGaa                                                                                      <  1:392718‑M2/108‑1 (MQ=255)
                                                            tCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACgaga                                                                                       >  1:1745802/1‑150 (MQ=255)
                                                             cGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGaa                                                                                      <  1:2142467/150‑1 (MQ=255)
                                                             cGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTACGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGaaaa                                                                                    <  1:2089869/150‑1 (MQ=38)
                                                                aacgttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAagag                                                                                 >  1:3360951‑M2/38‑150 (MQ=255)
                                                                   gttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAgcgc                                                                              >  1:365243‑M2/35‑150 (MQ=255)
                                                                    ttgccaggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCa                                                                             <  1:1250086‑M2/117‑1 (MQ=255)
                                                                     cGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAgcgc                                                                              <  1:1344719/150‑1 (MQ=255)
                                                                      gTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTACGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAAc                                                                           >  1:1433843/1‑150 (MQ=255)
                                                                        caggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGa                                                                         >  1:2187743‑M2/30‑150 (MQ=255)
                                                                          ggcaagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGt                                                                       <  1:2567679‑M2/123‑1 (MQ=255)
                                                                          cGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTACGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGt                                                                       >  1:476525/1‑150 (MQ=255)
                                                                           gCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACATAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAg                                                                        >  1:1888306/1‑150 (MQ=255)
                                                                            caagaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGttt                                                                     <  1:3221884‑M2/125‑1 (MQ=255)
                                                                            cTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGttt                                                                     >  1:1036158/1‑150 (MQ=39)
                                                                              agaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTtag                                                                   <  1:3108380‑M2/127‑1 (MQ=255)
                                                                              agaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTtag                                                                   >  1:3639699‑M2/24‑150 (MQ=255)
                                                                              agaaatggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTtag                                                                   <  1:860139‑M2/127‑1 (MQ=255)
                                                                               gagTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTtagt                                                                  <  1:2234080/150‑1 (MQ=39)
                                                                                  tAGAACGTTACCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTACGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTaga                                                               <  1:243417/150‑1 (MQ=38)
                                                                                  atggatgcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTaga                                                               <  1:3297165‑M2/131‑1 (MQ=255)
                                                                                   aGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTagag                                                              >  1:1916132/1‑150 (MQ=38)
                                                                                    gAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCCAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATATGACGAAAAGAGAAAAGAGCGCAACGAGTTTAGTAGAGc                                                             >  1:3765652/1‑150 (MQ=38)
                                                                                     aaCGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTACGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCt                                                            >  1:1612064/1‑150 (MQ=38)
                                                                                       cGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTCGTAGAGCTaa                                                          >  1:1718384/1‑150 (MQ=38)
                                                                                        gcgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATATCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAACCGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTaaa                                                         >  1:961972‑M2/14‑150 (MQ=255)
                                                                                         cgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTg                                                                                                        <  1:2468990‑M2/90‑1 (MQ=255)
                                                                                         cgatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAAt                                                        <  1:644855‑M2/138‑1 (MQ=255)
                                                                                          tGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATg                                                       <  1:75134/150‑1 (MQ=38)
                                                                                          tGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTACGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATg                                                       <  1:1499089/150‑1 (MQ=37)
                                                                                          gatgagccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAATg                                                       <  1:2300906‑M2/139‑1 (MQ=255)
                                                                                           gCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAA‑‑TTAATACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGa                                                      >  1:500055/1‑150 (MQ=37)
                                                                                            ccAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATg                                                       >  1:1873452/1‑150 (MQ=255)
                                                                                             cAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGa                                                      <  1:796263/150‑1 (MQ=255)
                                                                                              agccgcaTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAATGAGTa                                                   <  1:3244403‑M2/143‑1 (MQ=255)
                                                                                              aGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAg                                                     <  1:3330175/150‑1 (MQ=255)
                                                                                               ggCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGt                                                    <  1:2691815/150‑1 (MQ=255)
                                                                                                   aGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGt                                                <  1:2358876/150‑1 (MQ=255)
                                                                                                     ttGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGTga                                              <  1:2114978/150‑1 (MQ=255)
                                                                                                       gagaCCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGTgaga                                            >  1:3311701/1‑150 (MQ=255)
                                                                                                       gagaCCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGc                                          >  1:1808658/1‑150 (MQ=25)
                                                                                                        agaCCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGcc                                         <  1:729472/150‑1 (MQ=25)
                                                                                                         gaCCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGTGAGAGCCg                                        >  1:2204350/1‑150 (MQ=25)
                                                                                                         gaCCGCAAGGTCTCCTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGTGAGAGCCg                                        >  1:2631556/1‑150 (MQ=21)
                                                                                                          aCCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGTGAGAGcc                                         <  1:2166400/150‑1 (MQ=255)
                                                                                                            cGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGTGAGAGcc                                         >  1:3265469/1‑146 (MQ=21)
                                                                                                                 ggTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATANAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAagag                                <  1:1380870/150‑1 (MQ=21)
                                                                                                                     tctTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGACAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAGAGGaaa                            >  1:3455870/1‑150 (MQ=18)
                                                                                                                     tctTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAGAGGaaa                            >  1:2601344/1‑150 (MQ=21)
                                                                                                                     tctTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGCTTAGCAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAGAGGaaa                            >  1:978173/1‑150 (MQ=255)
                                                                                                                      ctTTTTTTACGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGTGAGAGCCGAAGAAGAGGAaag                           >  1:3519444/1‑150 (MQ=21)
                                                                                                                             tATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGTGAGAGCCGAAGAAGAGGAAAGaagca                      <  1:1638246/150‑1 (MQ=255)
                                                                                                                              aTGTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGTGAGAGCCGAAGAAGAGGAaag                           <  1:2252133/142‑1 (MQ=21)
                                                                                                                              aTGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAGAGGAaagaag                        <  1:2551662/145‑1 (MQ=18)
                                                                                                                                gTCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGTTAAATGAGTAAGTGAGAGCCGAAGAAGAGGAAAGAAGCAAGCGa                 >  1:3175081/1‑150 (MQ=21)
                                                                                                                                 tCTAAAATGTCAAAGTAAAAAAGAAAACATAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGTGAGAGCCGAAGAAGAGGAAAGAAGCAAGCg                  >  1:1281988/1‑150 (MQ=255)
                                                                                                                                 tCTAAAATGTCAAAGTAAAAA‑‑TTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGCGAGAGCCGAAGAAGAGGAAAGAAGCAAGCGAt                >  1:145792/1‑150 (MQ=21)
                                                                                                                                        tGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGTGAGAGCCGAAGAAGAGGAaaga                          >  1:1224799/1‑135 (MQ=255)
                                                                                                                                          tCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGTGAGAGCCGAAGAAGAGGAAAGAAGCAAGCGATTGTcaca         >  1:630394/1‑150 (MQ=255)
                                                                                                                                          tCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGTGAGAGCCGAAGAAGAGGAAAGAAGCAAGCGATTGTcaca         <  1:2785138/150‑1 (MQ=255)
                                                                                                                                              aGTACAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGTGAGAGCCGAAGAAGAGGAAAGAAGCAAGCGATTGTCacaagac     >  1:252982/1‑150 (MQ=255)
                                                                                                                                               gTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGt                                                    >  1:344219/1‑102 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGTTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGTGAGAGCCGAAGAAGAGGAAAGAAGCAAGCGATTGTCACAAGACAAG  >  Xen36_12/1‑273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑