New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Xen36_1	= 162706	75 (0.500)	51 (0.290) +TGACTAGAGTTGAAA	31/268	4.2	60.2%	intergenic (+475/‑353)	trxB/Xen36_00155	Thioredoxin reductase/Nucleotide‑binding protein
	?	Xen36_5	= 192873	0 (0.000)					intergenic (+171/–)	Xen36_01570/–	hypothetical protein/–
Rejected: Coverage evenness skew score above cutoff.

TGTGTTTTAGCGACATAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen36_5/192724‑192873                                                                                                                                                      |                tgtgTTTTAGCGACATAAGCCTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCttt                 >  1:545864/1‑150 (MQ=255)    gtTTTAGCGACATAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCtttttt              >  1:850663/1‑147 (MQ=255)    gtTTTAGCGACATAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCtttttt              >  1:751270/1‑147 (MQ=255)    gtTTTAGCGACATAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCtttttt              <  1:3392065/150‑4 (MQ=255)    gtTTTAGCGACATAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCtttttt              <  1:1765672/150‑4 (MQ=255)        tAGCGACATAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCttttttcaac          <  1:1185803/150‑8 (MQ=255)        tAGCGACATAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCttttttcaac          <  1:1316777/150‑8 (MQ=255)         aGCGACATAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCttttttcaact         >  1:1683340/1‑142 (MQ=255)         aGCGACATAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCttttttcaact         <  1:3752151/150‑9 (MQ=255)          gCGACATAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCttttttcaactc        >  1:1608838/1‑141 (MQ=255)          gCGACATAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCttttttcaactc        <  1:528615/150‑10 (MQ=255)          gCGACATAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGATGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCttttttcaactc        >  1:1070042/1‑141 (MQ=255)             aCATAAGCTTTTTTCGTACGTCGTAAACATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGAATGAATGAAAATGCGCTTGCAACAAGCttttttcacctctaa     >  1:494907/1‑138 (MQ=21)             aCATAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCttttttcaactctag     >  1:494908/1‑138 (MQ=255)              cATAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCttttttcaactctagt    >  1:1308570/1‑137 (MQ=255)              cATAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCttttttcaactctagt    >  1:1308568/1‑137 (MQ=255)               aTAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTCGCAACAAGCttttttcaactctagtc   <  1:1377194/150‑15 (MQ=18)                tAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCttttttcaactctagtca  >  1:1561470/1‑135 (MQ=18)                tAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCttttttcaactctagtca  >  1:1257573/1‑135 (MQ=18)                                                                                                                                                      |                TGTGTTTTAGCGACATAAGCTTTTTTCGTACGTCGTAAAAATTTTAATACGAAGTGTAAAATGAGGCTGGGATATAAATCAATGTCCTAGGGTCTATAATATTATATTGGCAGTAGTTGACTGAATGAAAATGCGCTTGCAACAAGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen36_5/192724‑192873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.