BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Xen36_1	169165 =	127 (0.840)	38 (0.400) +CGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTT	27/190	2.8	32.8%	intergenic (+182/+264)	mleS/Xen36_00161	Malolactic enzyme/Epimerase family protein
*	?	Xen36_1	= 169278	118 (0.780)		27/190	2.8	32.8%	intergenic (+295/+151)	mleS/Xen36_00161	Malolactic enzyme/Epimerase family protein

Only 100 of 176 total aligned reads displayed.

TTTCAAGTGGCCTTTTCGTATTTACTTTAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACTAGAGTTGAAAAAAGCTTGTTGC  >  Xen36_1/169020‑169313

tttCAAGTGGCCTTTTCGTATTTACTTTAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAA‑TGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACt                                                                                                                                                 <  1:712091/150‑1 (MQ=255)

     aGTGGCCTTTTCGTATTTACTTTAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGca                                                                                                                                             <  1:3634250/150‑1 (MQ=255)

      gcggCCTTTTCGTATTTACTTTAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGcac                                                                                                                                            <  1:350880/148‑1 (MQ=255)

      gTGGCCTTTTCGTATTTACTTTAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGcac                                                                                                                                            <  1:3663920/150‑1 (MQ=255)

         gCCTTTTCGTATTTACTTTAAAATTAATCAACCAATATTCATAAGTGACTCTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACatt                                                                                                                                         >  1:545805/1‑150 (MQ=255)

          ccTTTT‑GTATTTACTTTAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACattat                                                                                                                                       <  1:1559013/150‑1 (MQ=255)

           cTTTTCGTATTTACTTTAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACattat                                                                                                                                       <  1:3257760/150‑1 (MQ=255)

             tttCGTATTTACTTTAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTg                                                                                                                                     <  1:2801975/150‑1 (MQ=255)

             agcttctatgttggggccccgccaacttgcacattattgtaagctgactttccgccagcttctatgttggggccccgccaacttgcacattattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACattatt                                                                                                                                      >  1:1586925‑M1/134‑150 (MQ=255)

              ttCGTATTTACTTTAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGt                                                                                                                                    <  1:176532/150‑1 (MQ=255)

                cGTATTTACTTTAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAATGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTaa                                                                                                                                  <  1:1033066/150‑1 (MQ=255)

                 tctatgttggtgccccgccaacttgcacattattgtaagctgactttccgccagcttctatgttggggccccgccaacttgcacattattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTaa                                                                                                                                  >  1:600236‑M1/130‑150 (MQ=255)

                 tctatgttggggccccgccagcttgcacattattgtaagctgactttccgccagcttctatgttggggtcccgccaacttgcacattattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTaa                                                                                                                                  >  1:2230656‑M1/130‑150 (MQ=255)

                 tctatgttggggccccgccaacttgcacattattgtaagctgactttccgccagcttctatgttggggccccgccaacttgcacattattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTaa                                                                                                                                  >  1:600234‑M1/130‑150 (MQ=255)

                  tATTTACTTTAAAATTAATCAGCTAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGc                                                                                                                                <  1:2256190/150‑1 (MQ=255)

                   aTTTACTTTAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCt                                                                                                                               <  1:283169/150‑1 (MQ=255)

                     tgttggtgccccgccaacttgcacattattgtaagctgactttccgccagcttctatgttggggccccgccaacttgcacattattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTAAGCTg                                                                                                                              >  1:3435360‑M1/126‑150 (MQ=255)

                     tgttggggccccgccaacttgcacattattgtaagctgactttccgccagcttctatgttggggccccgccaacttgcacattattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTAAGCTg                                                                                                                              >  1:3435361‑M1/126‑150 (MQ=255)

                      tACTTTAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGAc                                                                                                                            >  1:1237386/1‑150 (MQ=255)

                       ttggggccccgccaacttgcacattattgtaagctgactttccgccagcttctatgttggggccccgccaacttgcacattattgtaagttgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTAAGCTGAc                                                                                                                            <  1:59637‑M1/27‑1 (MQ=255)

                       ttggggccccgccaacttacacattattgtaagctgactttccgccagcttctatgttggggccccgccaacttgcacattattgttagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTAAGCTGAc                                                                                                                            >  1:1552385‑M1/124‑150 (MQ=255)

                       aCTTTAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGCTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTTTGTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGAc                                                                                                                            <  1:1410019/150‑1 (MQ=255)

                          ttAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTc                                                                                                                        >  1:2985147/1‑150 (MQ=255)

                          ttAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTc                                                                                                                        >  1:2985146/1‑150 (MQ=255)

                          ttAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTc                                                                                                                        >  1:1414545/1‑150 (MQ=255)

                          gggccccgccaacttgcacattattgtaagctgactttccgccagcttctatgtttgggccccgccaacttgcacattattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTAAGCTGACttt                                                                                                                         >  1:1213381‑M1/121‑150 (MQ=255)

                           ggccccgccaacttgcacattattgtaagctgactttccgccagcttctatgttggggccccgccaacttgcacattattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTAAGCTGACTTTc                                                                                                                        <  1:1524631‑M1/31‑1 (MQ=255)

                            gccccgccaacttgcacattattgtaagctgactttccgccagcttctatgttggggccccgccaacttgcacagtattgtaagctgactttccgtcatcttctgtgttggggcccctCCAACTCGCACACTATTATAAGCTGACTTTcc                                                                                                                       <  1:382264‑M1/32‑1 (MQ=255)

                            aaaaTTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCg                                                                                                                      <  1:370182/150‑1 (MQ=255)

                              cccgccaacttgcacattattgtaagctgactttccgccagcttctatgttggggccccgccaacttgcacattattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTAAGCTGACTTTCCGt                                                                                                                     <  1:718148‑M1/34‑1 (MQ=255)

                               ccgccaacttgcacattattgtaagctnactttccgccagcttctatgttggggccccgccaacttgcacattattgtaaactgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTAAGCTGACTTTCCGTc                                                                                                                    <  1:3550721‑M1/35‑1 (MQ=255)

                               aTTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GCTGTCCCACCCCAATTTGCACATTATTGTAAGCTGACTTTCCGTCa                                                                                                                   >  1:429650/1‑150 (MQ=255)

                               aTTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GCTGTCCCACCCCAACTTGCAAATTATTGTAAGCTGACTTTCCGTCa                                                                                                                   >  1:429651/1‑150 (MQ=255)

                                ttAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAg                                                                                                                  <  1:3311074/150‑1 (MQ=255)

                                   aTCAACCAATATTCATAAGTGNCTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCtt                                                                                                               >  1:3477538/1‑150 (MQ=255)

                                   aTCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCtt                                                                                                               >  1:3216757/1‑150 (MQ=255)

                                   aTCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCtt                                                                                                               >  1:1335962/1‑150 (MQ=255)

                                   aTCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCtt                                                                                                               >  1:1276513/1‑150 (MQ=255)

                                     cAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTT‑‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTa                                                                                                            <  1:1410828/150‑1 (MQ=255)

                                     acttgcacattattgtaagctgactttccgccagtttctatgttggggccccgccaacttgcacattattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTc                                                                                                              >  1:1241678‑M1/110‑150 (MQ=255)

                                      cttgcgcattattntaagctgactttccgccggcttctatgttggggccccgccaacttgcacatgattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCt                                                                                                             <  1:3560454‑M1/42‑1 (MQ=255)

                                       ttgcacattcttgtaagctggctttccgccagcttctatgttggggccccgccaacttgcacattattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTa                                                                                                            >  1:758637‑M1/108‑150 (MQ=255)

                                        ccAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAATGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATg                                                                                                          >  1:1665245/1‑150 (MQ=255)

                                           atatTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTg                                                                                                       <  1:1067757/150‑1 (MQ=255)

                                           atatTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTg                                                                                                       <  1:2886066/150‑1 (MQ=255)

                                            tatTCATAAGTGACTTTAAAGTTATATCTATATGTAACATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTgg                                                                                                      <  1:1889352/150‑1 (MQ=255)

                                             attattgtaagctgcctttccgccagcttctatgttggggccccgccaacttgcacattattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTgg                                                                                                      <  1:582455‑M1/49‑1 (MQ=255)

                                             atTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTggg                                                                                                     <  1:1619790/150‑1 (MQ=255)

                                             atTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTggg                                                                                                     <  1:3032050/150‑1 (MQ=255)

                                             atTCATAAGTGACTTTAAAGTTATATCTATACGTAATATCAGCAAATAGAAGGGAGTGGAACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTggg                                                                                                     <  1:701511/150‑1 (MQ=255)

                                               tCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGc                                                                                                   <  1:3392606/150‑1 (MQ=255)

                                                 ttgtaagctgactttccgccagcttctatgttggggccccgccaacttgcacattattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTCGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGcc                                                                                                  <  1:779566‑M1/53‑1 (MQ=255)

                                                            tAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGc                                                                                      <  1:2673208/150‑1 (MQ=255)

                                                            tAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGc                                                                                      <  1:748709/150‑1 (MQ=255)

                                                            tAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGc                                                                                      <  1:748711/150‑1 (MQ=255)

                                                            ctttccgccagcttctatgttggggccccgccaacttgcacattattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTg                                                                                       >  1:833888‑M1/87‑150 (MQ=255)

                                                            ctttccgccagcttctatgttggggccccgccaacttgcacagtattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTg                                                                                       <  1:1844653‑M1/64‑1 (MQ=255)

                                                                 cgccagcttctatgttggggccccgccaacttgcacattattgtaagctgactttccgtcagcttctatgttggggccccgCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTtgcacct                                                                                  <  1:2390245‑M1/69‑3 (MQ=255)

                                                                   atatCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACattat                                                                               <  1:2036701/150‑1 (MQ=255)

                                                                    tatCTATATGTAATATCAGCCAATAGAAGGGAGTGGTACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGCCTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCGCattatt                                                                              >  1:940806/1‑150 (MQ=37)

                                                                        tataTGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTaa                                                                          <  1:3447163/150‑1 (MQ=255)

                                                                           atGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCt                                                                       >  1:246445/1‑150 (MQ=255)

                                                                             gTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGcaga                                                                     >  1:1867067/1‑147 (MQ=255)

                                                                                  atCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTACGCTGACTTTc                                                                >  1:1038382/1‑150 (MQ=255)

                                                                                     aGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGc                                                             >  1:477691/1‑150 (MQ=255)

                                                                                          aTAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTT‑‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCtt                                                       >  1:2561718/1‑150 (MQ=255)

                                                                                             gAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACattat                                                                               <  1:17705/124‑1 (MQ=255)

                                                                                             gAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCt                                                     >  1:2193255/1‑150 (MQ=255)

                                                                                              aaGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGATTTTCCggcaagttata                                                    >  1:3771521/1‑140 (MQ=255)

                                                                                                gggAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATg                                                  >  1:1142135/1‑150 (MQ=255)

                                                                                                       ggACAAAAATTATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGc                                           <  1:3653085/150‑1 (MQ=255)

                                                                                                           aaaaaTGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCccg                                       <  1:2158751/150‑1 (MQ=255)

                                                                                                            aaaaTGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCccgc                                      <  1:1316647/150‑1 (MQ=255)

                                                                                                               aTGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGACCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCgg                                   <  1:211096/150‑1 (MQ=255)

                                                                                                                   tatTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAg                               >  1:1320040/1‑150 (MQ=255)

                                                                                                                     tttttACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACGTTATTGTAGGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGt                             >  1:657565/1‑150 (MQ=255)

                                                                                                                     tttttACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGt                             >  1:734194/1‑150 (MQ=255)

                                                                                                                       tttACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTg                           >  1:1151801/1‑150 (MQ=255)

                                                                                                                        ttACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGa                          <  1:3751746/150‑1 (MQ=255)

                                                                                                                          aCAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACt                        <  1:549664/150‑1 (MQ=255)

                                                                                                                          aCAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACt                        <  1:549662/150‑1 (MQ=255)

                                                                                                                          aCAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCCGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACt                        <  1:2362885/150‑1 (MQ=255)

                                                                                                                                ctttatcgttgtcccacccCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCaacttgcacattattgta                   <  1:3299273‑M2/143‑19 (MQ=255)

                                                                                                                                 tttatcgttgtcccaccCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCaacttgcacattattgtaa                  <  1:1428998‑M2/144‑20 (MQ=255)

                                                                                                                                     tcgttgtccCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCaacttgcacattattgtaagctg              >  1:1293762‑M2/3‑127 (MQ=255)

                                                                                                                                     t‑gttgtCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACTAGAGTTGaaaa             <  1:2316050/150‑1 (MQ=255)

                                                                                                                                     t‑gttgcCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACTAGAGTTGaaaa             >  1:180690/1‑150 (MQ=255)

                                                                                                                                       gttgtCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACTAGAGTTGaaaaa            <  1:2202035/150‑1 (MQ=255)

                                                                                                                                       gttgtCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCaacttgcacattattgtaagctgac            >  1:2678912‑M2/1‑125 (MQ=255)

                                                                                                                                       gttgtCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCaacttgcacattattgtaagctgac            >  1:368699‑M2/1‑125 (MQ=255)

                                                                                                                                         tgtCCCACCCCAACTTGCACGTTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACTAGAGTTGAAAAAAg          <  1:3351266/150‑1 (MQ=255)

                                                                                                                                         tgtCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAACTTCTCTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAGTTGAAAAAAg          >  1:3749404/1‑150 (MQ=255)

                                                                                                                                         tgtCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTCGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACTAGAGTTGAAAAAAg          <  1:3195789/150‑1 (MQ=255)

                                                                                                                                         cgtCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACTagag                    <  1:3083849/139‑1 (MQ=255)

                                                                                                                                         cgtCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACTagag                    <  1:1860914/139‑1 (MQ=255)

                                                                                                                                          gtCCCACCCCAACTTGCACATTATTGTCAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCTGGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACTAGAGTTAAAAAAAGc         >  1:3534487/1‑150 (MQ=18)

                                                                                                                                          gtCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACTagag                    <  1:1307876/139‑1 (MQ=255)

                                                                                                                                          gtCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACTAGAGTTGAAAAAAGc         >  1:1030364/1‑150 (MQ=255)

                                                                                                                                            cccACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACTAGAGTTGAAAAAAGCtt       >  1:2096038/1‑150 (MQ=255)

                                                                                                                                                 cccAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACTAGAGTTGAAAAAAGCTTGTTGc  >  1:3218967/1‑150 (MQ=255)

TTTCAAGTGGCCTTTTCGTATTTACTTTAAAATTAATCAACCAATATTCATAAGTGACTTTAAAGTTATATCTATATGTAATATCAGCAAATAGAAGGGAGTGGGACAAAAATGATATTTTTACAATTTTTTTT‑GTTGTCCCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCGGCAAGGTTGACTAGAGTTGAAAAAAGCTTGTTGC  >  Xen36_1/169020‑169313

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.