| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen36_12 | = 79 | NA (NA) | 158 (0.970) +AAATGGATGCGATGAGCCGCA |
67/256 | 1.4 | 45.1% | intergenic (–/+542) | –/gabR | –/HTH‑type transcriptional regulatory protein GabR |
| ? | Xen36_12 | 80 = | 224 (1.190) | intergenic (–/+541) | –/gabR | –/HTH‑type transcriptional regulatory protein GabR | |||||
Only 100 of 210 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑CCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen36_12/1‑79‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGT‑GA > Xen36_12/80‑229 ||||||||||||||||||||| ctgttcccatgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTC < 1:2560935/139‑1 gttcccatgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTNTATGTCTAAAACGTCAA < 1:1994687/141‑1 cccatgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAAat > 1:102971/7‑148 cccatgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAAat > 1:102976/7‑148 cccatgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAAat < 1:3705501/144‑3 cccatgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGACGCGATGAGCCGCACTGAGGCCGCAAGGTCTCTTTTTTTACATCTAAAACGTCcaaat > 1:691081/7‑145 catgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAAATAA > 1:2558194/5‑150 tgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAAATAAAA < 1:108783/148‑1 gCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAAATAAAAg < 1:921066/149‑2 gCCGAACACAGAAGTTAAGCTCCTGAGCGTCGATGGTAGTCGGACTTACGTTCCGCTAGAGTAGAATGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAAATAAAAg < 1:1122396/149‑2 CGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGCCCGCAAAATCTCTCTTTTTATATCTAAAACGTCccaaccccaatt > 1:1451019/1‑138 ACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGCAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAAATAAAAgttaac < 1:2594531/150‑7 AAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAAATAAAAgttaacacaaag < 1:1203075/150‑13 AGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAAT < 1:2506254/150‑1 GCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTNTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATG > 1:3554690/1‑150 CTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTT < 1:1631556/150‑1 GGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAA < 1:3397849/150‑1 GTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAA < 1:835094/150‑1 TAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAAC < 1:3013194/150‑1 TAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAAC < 1:1535834/150‑1 gccAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTT > 1:2906012/4‑150 cAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTG < 1:3756732/149‑1 AACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGA < 1:1679011/150‑1 ACTTAAGTTCTGCTAGAGTAGAACGTTGCCAGGCAAGAAAGGGATGCGATGAGCCGCATTGAGACCGCACGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAA < 1:2336152/150‑1 TTACTTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATC < 1:1238625/150‑1 TTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATC < 1:1545718/150‑1 TACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCT < 1:3061877/150‑1 TACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCT > 1:2097468/1‑150 CGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGA < 1:3516684/150‑1 CGTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGA > 1:270083/1‑150 GTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGAC < 1:1322801/150‑1 GTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGAC < 1:2945523/150‑1 GTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGAC < 1:823919/150‑1 GTTCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCAATGAGCCGCATTGAGACCGCAAGGTCTCTTTTGTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGAC < 1:479240/150‑1 TCCGCTAGAGTAGAACGTTGCCAGGCAAGAAGTGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTCTGTCTAAAACGTCAAA‑‑ATCAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGA > 1:3502379/1‑150 TCCGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGA < 1:1572105/150‑1 CGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAA > 1:1001251/1‑150 CGCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAA > 1:364137/1‑150 GCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGATACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAAC < 1:1133989/150‑1 GCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAAATAAAAgttaac < 1:3621504/101‑7 GCTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAAAACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAAC > 1:602117/1‑150 CTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAAAACAAAGAAGAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACa > 1:1611521/1‑149 CTAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAA‑‑CATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACa > 1:3605425/1‑149 TAGAGTAGCACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGA > 1:3287129/1‑150 TAGAGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACaa > 1:3373745/1‑148 AGTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAA > 1:3260246/1‑150 GTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCACGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAA > 1:2251351/1‑150 GTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAA > 1:2054687/1‑150 GTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAA < 1:2475695/150‑1 GTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAA > 1:1947251/1‑150 GTAGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTG < 1:1801635/113‑1 TAGAACGTTGCCAGGCAAGAAATGGAGGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATGAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAA > 1:2121417/1‑150 AGAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAACTCAAA‑‑GTTAACACAAAGAAACATGGCTTGGCGAAGCGAAAACGTTTGAATCTGACGAAACAAGAAAAG > 1:709201/1‑150 GAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGA > 1:759060/1‑150 GAACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATCGAGACCGCACGGTCTCTCTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGA > 1:655455/1‑150 AACGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAG > 1:3360951/1‑150 CGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCG > 1:940196/1‑150 CGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAAAAAAGAGCG < 1:2270268/150‑1 CGTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCG < 1:1513236/150‑1 GTTGCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGC > 1:365243/1‑150 GCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAAC > 1:381956/1‑150 GCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAAC > 1:977977/1‑150 GCCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAAC > 1:1429927/1‑150 CCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAACCAAGAAAcgaacgtaacg > 1:1906081/1‑139 CCAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACG > 1:1253285/1‑150 CAGGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGA > 1:2187743/1‑150 AGGCAAGAAATGGATGCGATGAGCCGCACTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAG < 1:1410663/150‑1 GGCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGT > 1:3327995/1‑150 GCAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTT < 1:701731/150‑1 CAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑TAAAA‑‑GTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTA < 1:363187/150‑1 CAAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCATGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTT < 1:1592564/150‑1 AAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTA < 1:1840875/150‑1 AAGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGAC > 1:429115/1‑122 AGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAG < 1:1166669/150‑1 AGAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAG < 1:860139/150‑1 GAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGT > 1:127359/1‑150 GAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGT > 1:3111173/1‑150 GAAATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGT > 1:2107978/1‑150 AATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAG > 1:669326/1‑150 ATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGGGTTTAGTAGg < 1:523051/150‑2 ATGGATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGA < 1:887598/150‑1 GATGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCT > 1:320830/1‑150 TGCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAA > 1:2429052/1‑150 GCGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAGATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAA > 1:3246585/1‑150 CGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAAT < 1:1446161/150‑1 CGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAAT < 1:644855/150‑1 CGATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAAT > 1:1723447/1‑150 GATGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAG > 1:1242072/1‑133 GATGAGCCGCATTGAGACCGCAAGGTCCCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAATG < 1:2225883/150‑1 TGAGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAG < 1:3306944/150‑1 TGAGCCGCATTGAGACCGCAACGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTAGTGAAGTGAAAACGTTTGAACCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAG < 1:3573434/150‑1 AGCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTA < 1:464361/150‑1 GCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAATGAGTAA > 1:1857502/1‑150 GCCGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAATGAGTAA > 1:962530/1‑150 CGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGGGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGT < 1:114919/150‑1 CGCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGGGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGT < 1:2599805/150‑1 GCATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAATGAGTAAGcg < 1:1885951/150‑3 CATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAATGAGTAAGcga > 1:1798260/1‑147 ATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAATGAGTAAGcgag < 1:1056303/150‑5 ATTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAACGTCAAA‑‑ATAAAAGTTAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACAAGAAAAGAGCGTAACGAGTTTAGTAGAGCTAAATGAGTAAGcgag < 1:2881999/150‑5 ||||||||||||||||||||| ‑‑‑‑‑‑‑‑‑‑‑CCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen36_12/1‑79‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGAGACCGCAAGGTCTCTTTTTTTATGTCTAAAATGTCAAAGTAAAAAAGAAAACACAAAGAAAAATGGCTTGGCGAAGTGAAAACGTTTGAATCTGACGAAACGAGAAAAGAGCGCAACGAGTTTAGTAGAGCTAAATGAGTAAGT‑GA > Xen36_12/80‑229 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |