| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen36_1 | = 169278 | 118 (0.780) | 37 (0.400) +AACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCA |
27/192 | 2.8 | 33.8% | intergenic (+295/+151) | mleS/Xen36_00161 | Malolactic enzyme/Epimerase family protein |
| ? | Xen36_2 | = 226887 | 108 (0.780) | intergenic (+197/‑276) | lepA/hemW | Elongation factor 4/Heme chaperone HemW | |||||
CCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen36_1/169160‑169278‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCATT < Xen36_2/226887‑226827 ||||||||||||||||||||||||||||||||||||||||||||||||||||| cccCCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCCGTAGAAATTGGGAATCC < 1:3616139/147‑1 CAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTC < 1:106606/150‑1 CAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTC > 1:2069114/1‑150 AACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCT > 1:2955396/1‑150 AACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCT > 1:1337644/1‑150 ACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTC < 1:615298/150‑1 CTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCT > 1:1622122/1‑150 TGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGTGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCACCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTATAGAAATTGGGAATCCAATTTCTCTTT > 1:2410940/1‑150 GTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCA > 1:2777629/1‑150 GTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCA > 1:716249/1‑150 GCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACC > 1:671091/1‑150 GCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTGCCGTCAGTTTCTATGTTTGGGCCCCGCTAACTTGCATTGTCTGTAGAAATTGGGAAGCCAATTTCTCTTTGTTGGGGCCCACACC < 1:391009/150‑1 CCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGC > 1:1158189/1‑150 GTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCAT > 1:226486/1‑150 GCTTCTATGTTGGGGCCCCACCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCC < 1:1865121/150‑1 CTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTTGGGCCCACACCCCAACTCGCATTGCCT > 1:2055537/1‑150 CTTCTATGTTGGGGCCCCGCCAACTTGCACATTATCGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCT > 1:1053103/1‑150 CTTCTATGTTGGGGCCCCGCCAACTTGCACATTATCGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCT > 1:2879733/1‑150 CTTCTAGGTTTGGGCCCCGCCAACCTGCACACTACTGTAAGCTTACTTTCCGTCAGCTTCTATGTTGGTGCCCCGCCAACTTGCATTGTCTGGAGAAAGTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCT < 1:2017747/150‑1 GTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACATCCCAACTCGCATTGCCTGTAGAAT > 1:2772356/1‑150 GTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACATCCCAACTCGCATTGCCTGTAGAAT > 1:699982/1‑150 GTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAAT > 1:1009991/1‑150 GGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCT < 1:711851/150‑1 GGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCT > 1:1091410/1‑150 GGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTT < 1:308385/150‑1 GCCCCGCCAACTTGCACATCATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTT > 1:1923929/1‑150 CCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTC > 1:1637511/1‑150 accaCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCG < 1:1102807/146‑1 CAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT < 1:1112631/150‑1 CAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT < 1:1112629/150‑1 ACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTC > 1:2286505/1‑150 ACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTATAGAATTTCTTTTCGAAATTC < 1:680265/150‑1 ACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGAAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTC > 1:2126437/1‑150 CTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCT > 1:221441/1‑150 TGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCT > 1:3225726/1‑150 GCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTG > 1:454538/1‑150 CACATTATTGTAAGCTGACTTTCCGCCAGCTTCTGTGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGT > 1:3456354/1‑150 CACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGT > 1:1032181/1‑150 TTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGG < 1:2228585/150‑1 TTGTAAGCTGACTTTCCGCAAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCCACTCGCCTTGCCTGTAGACTTTTGTCTCGAAAGTCTCTATGTTGGGG > 1:3523206/1‑150 TGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCTCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCAATGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGC < 1:3477872/150‑1 TGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGC > 1:1740728/1‑150 GCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCtg < 1:2936135/150‑3 GCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCtg > 1:667233/1‑148 GCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCtg < 1:1266967/150‑3 CTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAGTTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCACTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCtga < 1:1552284/150‑4 TTCTATGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCG > 1:1300469/1‑109 ||||||||||||||||||||||||||||||||||||||||||||||||||||| CCACCCCAACTTGCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen36_1/169160‑169278‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCATT < Xen36_2/226887‑226827 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |