| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen36_1 | 162640 = | 108 (0.720) | 39 (0.370) +ACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTT |
28/210 | 3.2 | 32.9% | intergenic (+409/‑419) | trxB/Xen36_00155 | Thioredoxin reductase/Nucleotide‑binding protein |
| ? | Xen36_1 | = 169278 | 118 (0.780) | intergenic (+295/+151) | mleS/Xen36_00161 | Malolactic enzyme/Epimerase family protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
GGTGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen36_1/162709‑162640‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGG < Xen36_1/169278‑169160 |||||||||||||||||||||||||||||||||||||||||||| tcaGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAGTGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAACTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAG > 1:1552284/4‑150 caGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGC < 1:667233/148‑1 caGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGC > 1:2936135/3‑150 caGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGC > 1:1266967/3‑150 GCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCATTGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGAGCCCCAACATAGAAGCTGGCGGAAAGTCAGCTTACA > 1:3477872/1‑150 GCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGCTTACA < 1:1740728/150‑1 CCCCAACATAGAGACTTTCGAGACAAAAGTCTACAGGCAAGGCGAGTGGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTTGCGGAAAGTCAGCTTACAA < 1:3523206/150‑1 CCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGCTTACAA > 1:2228585/1‑150 ACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTG < 1:1032181/150‑1 ACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACACAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTG < 1:3456354/150‑1 CAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTGC < 1:454538/150‑1 AGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTGCA < 1:3225726/150‑1 AGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTGCAAG < 1:221441/150‑1 GAATTTCGAAAAGAAATTCTATAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTGCAAGT > 1:680265/1‑150 GAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTTCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTGCAAGT < 1:2126437/150‑1 GAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTGCAAGT < 1:2286505/150‑1 ATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTGCAAGTTG > 1:1112631/1‑150 ATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTGCAAGTTG > 1:1112629/1‑150 CGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTGCAAGTTGtggt > 1:1102807/1‑146 CGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAA < 1:1300469/109‑1 GAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGG < 1:1637511/150‑1 AAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATGATGTGCAAGTTGGCGGGGC < 1:1923929/150‑1 AAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCC > 1:308385/1‑150 AGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCC > 1:711851/1‑150 AGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCC < 1:1091410/150‑1 ATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAAC < 1:1009991/150‑1 ATTCTACAGGCAATGCGAGTTGGGATGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAAC < 1:699982/150‑1 ATTCTACAGGCAATGCGAGTTGGGATGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAAC < 1:2772356/150‑1 AGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCACTTTCTCCAGACAATGCAAGTTGGCGGGGCACCAACATAGAAGCTGACGGAAAGTAAGCTTACAGTAGTGTGCAGGTTGGCGGGGCCCAAACCTAGAAG > 1:2017747/1‑150 AGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACGATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAG < 1:1053103/150‑1 AGGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACGATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAG < 1:2879733/150‑1 AGGCAATGCGAGTTGGGGTGTGGGCCCAAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAG < 1:2055537/150‑1 GGCAATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGTGGGGCCCCAACATAGAAGC > 1:1865121/1‑150 ATGCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGAC < 1:226486/150‑1 GCGAGTTGGGGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGG < 1:1158189/150‑1 GGTGTGGGCCCCAACAAAGAGAAATTGGCTTCCCAATTTCTACAGACAATGCAAGTTAGCGGGGCCCAAACATAGAAACTGACGGCAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGC > 1:391009/1‑150 GGTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGC < 1:671091/150‑1 TGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTAC < 1:716249/150‑1 TGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTAC < 1:2777629/150‑1 AAAGAGAAATTGGATTCCCAATTTCTATAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGTGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCACAACATAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTGCA < 1:2410940/150‑1 AGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAG < 1:1622122/150‑1 GAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGT > 1:615298/1‑150 AGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTT < 1:2955396/150‑1 AGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTT < 1:1337644/150‑1 GAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTG > 1:106606/1‑150 GAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTG < 1:2069114/150‑1 GGATTCCCAATTTCTACGGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGGGggg > 1:3616139/1‑147 |||||||||||||||||||||||||||||||||||||||||||| GGTGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen36_1/162709‑162640‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGACGGAAAGTCAGCTTACAATAATGTGCAAGTTGGGGTGG < Xen36_1/169278‑169160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |