| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | Xen14_17 | 80,371 | G→A | intergenic (‑102/–) | Xen14_02064 ← / – | IS4 family transposase ISEc13/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Xen14_17 | 80,371 | 0 | G | A | 98.4% | 128.7 / ‑5.2 | 61 | intergenic (‑102/–) | Xen14_02064/– | IS4 family transposase ISEc13/– |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (35/25); total (36/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.92e-02 | |||||||||||
GACAGTGATTACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCGCTGCTGTTCGATAAGACCG‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_17/80225‑80390 | gacagTGATTACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCactg > 1:713231/1‑150 (MQ=25)gacagTGATTACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCactg < 1:2983152/150‑1 (MQ=25) acagTGATTACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCactgc < 1:3139564/150‑1 (MQ=25) tGATTACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGtt < 1:4097043/150‑1 (MQ=25) tGATTACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGtt > 1:385096/1‑150 (MQ=25) tGATTACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGtt < 1:2003275/150‑1 (MQ=25) tGATTACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGtt < 1:2003272/150‑1 (MQ=25) gATTACCTGTTTCTGTATCTTCCCCAGCCGTTCGGCCATGCGCCCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACCCCAGCACTGCTGTTc < 1:3415426/150‑1 (MQ=11) gATTACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTc < 1:142463/150‑1 (MQ=25) aTTACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCg < 1:3267023/150‑1 (MQ=25) aTTACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCg < 1:233896/150‑1 (MQ=25) ttACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGa < 1:980745/150‑1 (MQ=25) ttACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGa < 1:1298061/150‑1 (MQ=25) ttACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTGCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGa < 1:980746/150‑1 (MQ=255) ttACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACCTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGa < 1:1298060/150‑1 (MQ=255) tACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGAt < 1:3425851/150‑1 (MQ=25) tACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGAt < 1:1416791/150‑1 (MQ=25) caatatatCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATa < 1:1093864/143‑1 (MQ=255) aCCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATa < 1:254963/150‑1 (MQ=25) aCCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATa < 1:254961/150‑1 (MQ=25) cTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAg > 1:1175813/1‑150 (MQ=21) cTGTTGCTGTATCTCCCCCAGCCGGTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAg < 1:3890217/150‑1 (MQ=255) cTGTTCCTATATCTCCCCCCGCCGTTCGGCCATTCGTTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTCCAAAGGGACGTTCTTTTCGCTTGTGCTTAACACAATAGGTGTCCATGGCACGACTCCAGCACTGCTGTTCGCTAAg > 1:3983449/1‑150 (MQ=11) tgtatCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGa > 1:3383427/5‑150 (MQ=12) tGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATaa < 1:3067987/148‑1 (MQ=18) tGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGa > 1:1582171/1‑150 (MQ=18) tGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGa > 1:1582174/1‑150 (MQ=18) tGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGa > 1:1578762/1‑150 (MQ=18) gTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGat < 1:4045737/150‑2 (MQ=17) tttCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATa > 1:2516226/1‑145 (MQ=17) ttCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATa > 1:1638184/1‑144 (MQ=17) ttCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATa > 1:1638183/1‑144 (MQ=17) ttCTGTATCTCCCCCAGCCGTTCAGCCATGCGCTCCGAAGCACGATGCCAGCGATAAATCTCTTTTCCTTCACAGGAGCGTTCTTCTCGCTGGTGCGTACCACCGTAGGTGTATGTGGCACGACTACAGCACTACTGTTCGagaagatta > 1:4254053/1‑147 (MQ=2) tCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcga > 1:687447/1‑146 (MQ=12) tCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcga > 1:687444/1‑146 (MQ=12) tCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcga > 1:687443/1‑146 (MQ=12) tCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcga > 1:2182568/1‑146 (MQ=12) tCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcga > 1:3610484/1‑146 (MQ=12) cTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgac > 1:3578775/1‑145 (MQ=12) cTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgac > 1:358296/1‑145 (MQ=12) tGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgact < 1:1046225/150‑7 (MQ=12) tGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgact < 1:1892535/150‑7 (MQ=12) tGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACCTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGATGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCg > 1:2705183/1‑138 (MQ=255) tATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGTGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGa < 1:2863685/137‑1 (MQ=16) tATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgactgg > 1:1036876/1‑142 (MQ=255) tATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgactgg < 1:3030823/150‑9 (MQ=255) aTCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgactggc > 1:1651268/1‑141 (MQ=255) tctcCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgactggca < 1:104237/150‑11 (MQ=255) tctcCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgactggca > 1:633802/1‑140 (MQ=255) tctcCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgactggca > 1:633801/1‑140 (MQ=255) tctcCCACAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgactggca > 1:3855109/1‑140 (MQ=11) ctcCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgactggcag > 1:15515/1‑139 (MQ=11) ctcCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTCTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgactggcag > 1:2265277/1‑139 (MQ=11) ctcCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGATAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgactggcag > 1:880063/1‑139 (MQ=11) cccccAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTTGATAAGatcgactggcaggg > 1:848596/1‑137 (MQ=11) cccccAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgactggcaggg > 1:1054259/1‑137 (MQ=11) cccccAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgactggcaggg > 1:3616564/1‑137 (MQ=11) cccccAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgactggcaggg > 1:1054263/1‑137 (MQ=11) ccccAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGATTCCAGCGCAGCTGTTCGATAAGACCgactggcagggc > 1:4159531/1‑139 (MQ=11) ccccAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgactggcagggc > 1:486624/1‑136 (MQ=11) cccAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgactggcagggcg > 1:3153987/1‑135 (MQ=11) cccAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGATGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATAAGatcgactggcagggcg > 1:1963075/1‑135 (MQ=11) gcTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCActgctg < 1:1307028/106‑1 (MQ=18) ctgctgCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCACTGCTGTTCGATaa > 1:1477980/1‑104 (MQ=18) | GACAGTGATTACCTGTTTCTGTATCTCCCCCAGCCGTTCGGCCATGCGCTCCGAAGCCTGCTGCCAGCGGTAACTTTCTTTTTCTTCACAGGGACGTTCTTTTCGCTGGTGCTTAACACCGTAGGTGTCCGTGGCACGACTCCAGCGCTGCTGTTCGATAAGACCG‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_17/80225‑80390 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |