| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Xen14_17 | 79,628 | 0 | T | G | 76.1% | 854.3 / inf | 1007 | T214T (ACA→ACC) | Xen14_02064 | IS4 family transposase ISEc13 |
| Reads supporting (aligned to +/- strand): ref base T (137/103); new base G (465/299); total (603/404) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 1018 total aligned reads displayed.
CGCTGATTATTCCGCGAAAGGAGGCTCCCGTGTCCGGTGCTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTGTCGGCGTCAGTATTTTCTCACAGCTGTC > Xen14_17/79479‑79777 | attattCCGCGAAAGGAGGCTCCCGTGTCCGGTGCTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCg < 1:3448855/150‑1 (MQ=255) ttCCGCGAAAGGAGGCTCCCGTGTCCGGTGCTGTCTCTTGATCAGATCTCCTGATCAAAAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTg > 1:3350221/1‑150 (MQ=255) cgcgAAAGGAGGCTCCCGTGTCCGGTGCTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTg < 1:4152697/150‑1 (MQ=255) atctttgaccTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATGACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGt < 1:2589351/141‑1 (MQ=255) tttgaccTGTCTCTTGATCAGACCTCCTGATCAAGAGACTTCATCACCAAGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACCTAACTACCCAACCGGGGTTGCTTTTGCGTTTGCTGTCATGCCATCGCCCCAGttta > 1:3776151/7‑149 (MQ=17) tgaccTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGtttagc < 1:1591030/146‑4 (MQ=255) ctctTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCa > 1:1004973/1‑150 (MQ=255) ctTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCaaa > 1:1686418/1‑148 (MQ=255) cAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGcc > 1:1382704/1‑150 (MQ=255) tcCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTc > 1:1832129/1‑150 (MQ=255) cAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCg > 1:1754520/1‑150 (MQ=255) cAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCg > 1:331523/1‑150 (MQ=255) aaGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCgg < 1:2935708/150‑1 (MQ=255) gagaCTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCa < 1:2573419/141‑1 (MQ=255) catcaCCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCggtgtttgcgc > 1:2419248/1‑141 (MQ=17) caCCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCggtgtttgcgccgg > 1:62218/1‑138 (MQ=17) gCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTttccttcc < 1:2099160/150‑1 (MQ=17) ccATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCa < 1:4182661/150‑1 (MQ=17) cATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAg > 1:748216/1‑150 (MQ=17) atatCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGc < 1:2267883/150‑1 (MQ=17) tatCCTGATGTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCt < 1:2716786/150‑1 (MQ=11) ccTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTaa < 1:554094/150‑1 (MQ=17) agTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAcccgc > 1:3169106/2‑148 (MQ=11) agTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcac > 1:290049/2‑150 (MQ=11) agTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTATGACGGAAGCGGTTTTCCTTCCAGCTTAACCcac > 1:73382/2‑150 (MQ=11) gTCTGAACTAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca < 1:1101222/150‑1 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca < 1:1922332/150‑1 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca > 1:3838796/1‑150 (MQ=11) gTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCcaca > 1:1878942/1‑150 (MQ=17) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc > 1:861771/1‑149 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc > 1:693837/1‑149 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc > 1:906972/1‑149 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCCGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc > 1:2147019/1‑149 (MQ=11) tGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagca > 1:77764/1‑148 (MQ=11) tGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagca > 1:3387260/1‑148 (MQ=11) gAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagcag > 1:3036405/1‑147 (MQ=11) gAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagcag < 1:3094013/150‑4 (MQ=11) gAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagcag > 1:649674/1‑147 (MQ=11) gAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagcag < 1:1632211/150‑4 (MQ=11) gAACCAGCCATCCCACATGACTACCCAACCGGG‑CGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagcagt > 1:1202005/1‑150 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGTGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGtt < 1:3944233/150‑1 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGtt > 1:4052176/1‑150 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGtt < 1:2782213/150‑1 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGtt > 1:881026/1‑150 (MQ=11) ccaaccATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTCAACCCACagcagtgt < 1:3209973/146‑3 (MQ=11) cAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTc < 1:4121034/150‑1 (MQ=14) cAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTc > 1:1800196/1‑150 (MQ=14) cAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTc < 1:1652875/150‑1 (MQ=14) cAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCCAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTCCCAGCTTAACACACAGTAATTTc > 1:4085924/1‑150 (MQ=17) cAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTc > 1:2326070/1‑150 (MQ=18) aGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc < 1:1320595/150‑1 (MQ=14) aGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc < 1:3000853/150‑1 (MQ=14) aGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc < 1:1526182/150‑1 (MQ=14) aGCCATCCCACATGACTACCCAACCGGG‑CGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCa > 1:287124/1‑150 (MQ=14) aGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCACGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACATTAGTTTcc < 1:2683000/150‑1 (MQ=255) aGCCATCCCACACGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc < 1:2980157/150‑1 (MQ=14) gCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcac > 1:2848386/1‑139 (MQ=11) gCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCa < 1:3634918/150‑1 (MQ=14) gCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCAGGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCa < 1:4217267/150‑1 (MQ=14) ccATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAc > 1:1083099/1‑150 (MQ=14) ccATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAc < 1:3413986/150‑1 (MQ=14) ccATCCCACATGACTACCCAACCGGG‑CGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAct > 1:2531639/1‑150 (MQ=14) cATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAct > 1:3111578/1‑150 (MQ=14) cATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAct < 1:454538/150‑1 (MQ=14) cATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAct > 1:504378/1‑150 (MQ=14) cATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAct > 1:2024996/1‑150 (MQ=14) aTCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCActc > 1:2453382/1‑150 (MQ=14) aTCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCActc < 1:1155094/150‑1 (MQ=14) aTCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCActc > 1:374378/1‑150 (MQ=14) tCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCActct > 1:837138/1‑150 (MQ=14) cccACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTg > 1:4002468/1‑150 (MQ=21) ccACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGt > 1:956103/1‑150 (MQ=14) ccACATGACTACCCAACCGGG‑CGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTc < 1:2826133/150‑1 (MQ=14) cacaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTc > 1:22946/1‑150 (MQ=14) cacaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTc > 1:1428743/1‑150 (MQ=14) cacaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCACCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTc > 1:3144209/1‑150 (MQ=14) acaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCg < 1:2362097/150‑1 (MQ=17) acaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGATTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCg < 1:932948/150‑1 (MQ=14) catgaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCgg > 1:1258828/5‑150 (MQ=17) atgaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGc > 1:3524721/4‑150 (MQ=17) tgaCTACCCAACCGGGGCGACCGGTGCGTTTGNTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTNCAGTGTCGGCATCNGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTTTCGGCg > 1:3719591/3‑150 (MQ=17) tgaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCg < 1:2059520/148‑1 (MQ=17) tgaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCg < 1:2744054/148‑1 (MQ=17) tgaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCg < 1:3591518/148‑1 (MQ=17) tgaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCg > 1:3886531/3‑150 (MQ=17) tgaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCAGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCg > 1:2621247/3‑150 (MQ=17) gaCTACCCAACCGGGGCGACCGGTGCGTTTGTTGTCCCGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTTCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGt > 1:3970434/2‑150 (MQ=17) gaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGt < 1:1462125/149‑1 (MQ=17) aCTACCCAACCTGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTc < 1:265944/150‑1 (MQ=17) aCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGcatc < 1:3668558/150‑4 (MQ=17) cTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCa > 1:1300589/1‑150 (MQ=17) cTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCa > 1:1037523/1‑150 (MQ=17) cTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCa > 1:3269190/1‑150 (MQ=17) cTACCCAACCGGGGCGACCAGTGCGTTTGCTGCCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCa < 1:2234347/150‑1 (MQ=18) tACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAg < 1:586083/150‑1 (MQ=17) aCCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGt > 1:197201/1‑150 (MQ=18) aCCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGt > 1:2504065/1‑150 (MQ=18) cccAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGTa > 1:2190102/1‑150 (MQ=18) cccAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGTa > 1:3251212/1‑150 (MQ=18) cccAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGTa > 1:3491736/1‑150 (MQ=18) | CGCTGATTATTCCGCGAAAGGAGGCTCCCGTGTCCGGTGCTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTGTCGGCGTCAGTATTTTCTCACAGCTGTC > Xen14_17/79479‑79777 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |