| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Xen14_17 | 79,625 | 0 | G | A | 76.4% | 888.1 / inf | 1006 | S215S (AGC→AGT) ‡ | Xen14_02064 | IS4 family transposase ISEc13 |
| Reads supporting (aligned to +/- strand): ref base G (136/101); new base A (466/301); total (604/402) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 1011 total aligned reads displayed.
CGCTGATTATTCCGCGAAAGGAGGCTCCCGTGTCCGGTGCTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTGTCGGCGTCAGTATTTTCTCACAGC > Xen14_17/79479‑79773 | gATTATTCCGCGAAAGGAGGCTCCCGTGTCCGGTGCTGTCTCTTTATCAGATCTCCTGATCAAGAGACTTCATCACCCGGTCACCCCCAGCCATATCCTGATGTTTTAACCAACCATCCCCCATAACCCCCCAACCAGGGCTTCTtgttt > 1:3822170/1‑148 (MQ=21) attattCCGCGAAAGGAGGCTCCCGTGTCCGGTGCTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTAAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCg < 1:3371706/150‑1 (MQ=255) ccccatctttgaccTGTCTCTTGATCAGATCTCCTGATCGAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGccc > 1:2179703/14‑150 (MQ=17) ccatctttgaccTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCa < 1:1917171/139‑1 (MQ=255) gTGCTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGcc < 1:2674841/150‑1 (MQ=255) ctctTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCa > 1:1004973/1‑150 (MQ=255) tCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTc > 1:3667111/1‑150 (MQ=255) aaGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCgg > 1:3942998/1‑150 (MQ=255) gagaCTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCggtg < 1:2232199/150‑3 (MQ=255) caCCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCggtgtttgcgccgg > 1:62218/1‑138 (MQ=17) caCCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCggtgtttgcgccgg > 1:2055122/1‑138 (MQ=17) cccTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCggtgtttgcgccg > 1:361071/1‑128 (MQ=17) gCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTttccttcc > 1:1828892/1‑150 (MQ=17) ccATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCa < 1:4182661/150‑1 (MQ=17) cATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAg > 1:748216/1‑150 (MQ=17) atatCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGc < 1:4113082/150‑1 (MQ=17) atatCCTGAAGTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGc < 1:64719/150‑1 (MQ=11) tatCCTGAAGTCTGAACCAGCCATCCCACATTACTACCCAACCGTGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTGCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCt < 1:2996032/150‑1 (MQ=255) ccTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTaa < 1:554094/150‑1 (MQ=17) cTGAAGTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAc > 1:3102451/1‑150 (MQ=1) cTGAAGTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAc > 1:3262683/1‑150 (MQ=255) cTGAAGTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAc > 1:3409329/1‑150 (MQ=1) cTGAAGTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAc < 1:2814853/150‑1 (MQ=1) cTGAAGTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAc > 1:3483679/1‑150 (MQ=255) cTGAAGTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAc < 1:2572443/150‑1 (MQ=1) cTGAAGTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAc > 1:4083865/1‑150 (MQ=1) aagTCTGAACCAGCCATCCCACATGACTACCCAACCGTG‑CGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcac < 1:3434780/148‑1 (MQ=11) agTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcac > 1:273976/2‑150 (MQ=11) agTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTATGACGGAAGCGGTTTTCCTTCCAGCTTAACCcac > 1:73382/2‑150 (MQ=11) gTCTGAACTAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca < 1:1101222/150‑1 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca > 1:2769093/1‑150 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca > 1:2265262/1‑150 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca > 1:238805/1‑150 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc > 1:3885079/1‑149 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc > 1:3741728/1‑149 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc > 1:1588994/1‑149 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc > 1:906972/1‑149 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGG‑CGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagca > 1:1651705/1‑148 (MQ=11) cTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACagt > 1:679257/1‑150 (MQ=18) cTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACagt > 1:3519466/1‑150 (MQ=18) tGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagca > 1:77764/1‑148 (MQ=11) tGAACCAGCCATCCCACATGACTACCCAACCGGG‑CGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTCAACCCACagcag < 1:3340133/150‑4 (MQ=11) gAACCAGCCATCCCACATTACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagcag < 1:3306513/150‑4 (MQ=14) gAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCTATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagcag < 1:167554/150‑4 (MQ=11) gAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagcag > 1:2974437/1‑147 (MQ=11) gAACCAGCCATCCCACATGACTACCCAACCGGG‑CGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagcagt > 1:1202005/1‑150 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCGTTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGtt < 1:859094/150‑1 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGtt > 1:881025/1‑150 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGtt > 1:1256890/1‑150 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCACCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGtt > 1:2587329/1‑150 (MQ=11) aCCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGtt < 1:1624152/150‑1 (MQ=18) ccAGCCATCCCACATGACTGCCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGttt < 1:1971163/150‑1 (MQ=14) ccAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGttt < 1:1365142/150‑1 (MQ=14) cAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTc > 1:1292586/1‑150 (MQ=14) aGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCATTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc < 1:2917802/150‑1 (MQ=14) aGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc < 1:3166538/150‑1 (MQ=14) aGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc < 1:1526181/150‑1 (MQ=14) aGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc < 1:2617308/150‑1 (MQ=14) gCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCa > 1:4047619/1‑150 (MQ=14) gCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCa > 1:1744936/1‑150 (MQ=14) gCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCAGGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCa < 1:4217267/150‑1 (MQ=14) ccATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAc > 1:2839652/1‑150 (MQ=14) ccATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAc > 1:1083099/1‑150 (MQ=14) cATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAct < 1:454538/150‑1 (MQ=14) cATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAct > 1:504378/1‑150 (MQ=14) aTCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCActc < 1:1155094/150‑1 (MQ=14) tCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCActct > 1:837138/1‑150 (MQ=14) cccACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTg > 1:3022725/1‑150 (MQ=14) cccACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTg > 1:2706430/1‑150 (MQ=14) cccACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGCTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTg > 1:1314056/1‑150 (MQ=14) cccACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTg > 1:4002468/1‑150 (MQ=21) ccACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGt > 1:956103/1‑150 (MQ=14) ccACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGt > 1:2087565/1‑150 (MQ=14) cacaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTc > 1:3576580/1‑150 (MQ=14) cacaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTc > 1:1428743/1‑150 (MQ=14) cacaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTc > 1:2640926/1‑150 (MQ=14) cacaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTc > 1:2521855/1‑150 (MQ=14) cacaTGACTACCCAACCGGG‑CGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCg > 1:2288329/1‑150 (MQ=17) acaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCg < 1:3767038/150‑1 (MQ=17) acaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGATTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCg < 1:932948/150‑1 (MQ=14) caTAACTACCAAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTGTCgg < 1:4146582/150‑1 (MQ=21) tgaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCg < 1:2888830/148‑1 (MQ=17) gaCTACCCAACCGGGGCGACCGGTGCGTTTGTTGTCCCGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTTCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGt > 1:3970434/2‑150 (MQ=17) gaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGt < 1:3195102/149‑1 (MQ=17) gaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGt < 1:1462125/149‑1 (MQ=17) aCTACCCAACCGGGGCTNCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTCCGCTCTGTCGGCGTc > 1:3713389/1‑150 (MQ=18) aCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTc < 1:1873250/150‑1 (MQ=17) cTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCa > 1:1037523/1‑150 (MQ=17) cTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCa > 1:3130271/1‑150 (MQ=17) cTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCATCa > 1:3080650/1‑150 (MQ=17) tACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAg < 1:235996/150‑1 (MQ=17) tACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAg < 1:586083/150‑1 (MQ=17) tACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAg < 1:2013207/150‑1 (MQ=17) tACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCAACAGCAGTTTCCACTCTGTCGGCGTCAg < 1:2437956/150‑1 (MQ=17) aCCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCTAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGt > 1:1797166/1‑150 (MQ=17) cccAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGTa > 1:2137963/1‑150 (MQ=18) cccAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGTa > 1:2478332/1‑150 (MQ=18) cccAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGTa < 1:2869932/150‑1 (MQ=18) cccAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGTa > 1:3248838/1‑150 (MQ=18) ccAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTGTCGGCGTCAGTAt > 1:2318346/1‑150 (MQ=25) | CGCTGATTATTCCGCGAAAGGAGGCTCCCGTGTCCGGTGCTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTGTCGGCGTCAGTATTTTCTCACAGC > Xen14_17/79479‑79773 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |