| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Xen14_126 | 2,059 | 0 | T | G | 77.4% | 1775.1 / inf | 858 | A91A (GCT→GCG) | Xen14_04726 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (69/125); new base G (335/329); total (404/454) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.08e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.55e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 864 total aligned reads displayed.
TCAATGATAATGTTATTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAACTGAGTGGGAGGGGAAGATGATT > Xen14_126/1911‑2208 | tGATAATGTTATTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGctct < 1:2611655/150‑1 (MQ=255) tGTTATTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTcc < 1:1209473/150‑1 (MQ=255) tATTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTc < 1:930155/150‑1 (MQ=255) ttCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑a > 1:2086952/1‑150 (MQ=255) tCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑t < 1:1019436/150‑1 (MQ=255) tggttcaggctctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCAct > 1:2210509/13‑149 (MQ=255) tGGCTCAGGCTCTGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCAct < 1:4256988/150‑2 (MQ=255) gCTCAGGCTCTGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCActtc > 1:1046114/1‑147 (MQ=255) gCTCAGGCTCTGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCActtc > 1:2032532/1‑147 (MQ=255) gCTCAGGCTCTGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCActtc > 1:2851624/1‑147 (MQ=255) cTCAGGCTCTGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCActtcc > 1:1173346/1‑146 (MQ=255) caggctctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCActtccac < 1:2796461/143‑7 (MQ=255) cAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGac < 1:849322/150‑1 (MQ=255) ggctctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTT‑‑‑‑A‑‑TCCActtccactc < 1:1704639/145‑9 (MQ=255) ctctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCActtccactcag < 1:2306638/147‑11 (MQ=255) ctctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCActtccactcag > 1:1004638/4‑140 (MQ=255) ctctGGCAGAACGAAGGGCATGTTTCGCGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTT‑‑‑‑A‑‑TCCActtccactcag < 1:1502192/147‑11 (MQ=255) tctGGCAGAACGAAGGGCGTGTTTCGCGGTGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCActtccactcaga < 1:1233511/148‑12 (MQ=255) tctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCActtccactcaga < 1:757771/148‑12 (MQ=255) ctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCActtccactcagac < 1:1672030/149‑13 (MQ=255) ctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCActtccactcagac < 1:197143/149‑13 (MQ=255) tGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCActtccactcagacc < 1:1888346/150‑14 (MQ=255) tGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTc < 1:2259612/150‑1 (MQ=255) tGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTc < 1:2568129/150‑1 (MQ=255) ggCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCActtccactcagacca > 1:1339272/1‑136 (MQ=255) cGAAGGGCGTATATCGCGGCGTCTTTCTGTAACAGCCCCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTTCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAg < 1:4025397/150‑1 (MQ=255) gggCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAGCTcc < 1:1725043/150‑1 (MQ=255) gggCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAGCTcc < 1:2593073/150‑1 (MQ=255) tatCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTATTGTCAGTGCCAGCTCCTGCAAgg < 1:4091611/150‑1 (MQ=255) atCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGAGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGt < 1:180433/150‑1 (MQ=255) cgcgGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGACCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgca < 1:2354967‑M1/150‑36 (MQ=255) gcggcgTCTTTCGGTAACAACCTCTTCTGACACTTGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaa < 1:4163867‑M1/150‑37 (MQ=255) ggcgTCTTCCAGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaagg > 1:1461120‑M1/1‑112 (MQ=255) gTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTcc > 1:1951209/1‑150 (MQ=255) cTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGt > 1:274128/1‑150 (MQ=255) ttccggtAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaat < 1:184462‑M1/147‑45 (MQ=255) ccgGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattc > 1:2439244‑M1/2‑104 (MQ=255) acGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCAc > 1:3617239/2‑150 (MQ=255) ggTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccg < 1:3580045‑M1/150‑49 (MQ=255) tAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtc < 1:1268910‑M1/150‑51 (MQ=255) aacgacctctTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtca < 1:558435‑M1/146‑52 (MQ=255) acgacctcTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcac > 1:2649411‑M1/4‑98 (MQ=255) gaccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacgg > 1:2680689‑M1/2‑96 (MQ=255) ccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggta > 1:729764‑M1/1‑94 (MQ=255) ccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggta > 1:1435336‑M1/1‑94 (MQ=255) tcttctGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaac > 1:602632‑M1/1‑92 (MQ=255) cttctGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaaca < 1:3050444‑M1/150‑60 (MQ=255) tctGACACTGGCGTTGAATCATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatg < 1:2340969‑M1/150‑62 (MQ=255) ctGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatga > 1:3752930‑M1/1‑88 (MQ=255) cacTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGaaaa < 1:2006024/150‑1 (MQ=255) cacTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgct > 1:516874‑M1/1‑84 (MQ=255) cTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctgg > 1:980842‑M1/1‑82 (MQ=255) cTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctgg > 1:48207‑M1/1‑82 (MQ=255) ggCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTACGTCACGGTAACATGACGCTGGAAAATCCt < 1:2468464/150‑1 (MQ=255) ggCGTTGAATTATTACCTGTAGAAATAACGCCGGCTGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTCTCCACTTCCAC‑‑‑‑‑T‑CAGAACAGAGTCAGTGCCAGTTCCTTCAAGGTGGAATTCCGTCACGGTAACATGACGCTGGac > 1:3282906/1‑149 (MQ=255) ggCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaa < 1:3374387‑M1/150‑71 (MQ=255) gtgTTGAATTATTACCTGTAGAAATAACGCCGGATGGGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTT‑‑‑‑A‑‑TCCACTTCCACTCAGACCAGAGTCAGTGCCAGTTCCTGCAAGGTGGAATTCCGTTACGGTAACATGACGCTGGaaa < 1:3085612/148‑1 (MQ=255) gCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaa < 1:3879963‑M1/150‑72 (MQ=255) gCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaa < 1:3231322‑M1/150‑72 (MQ=255) cGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCGTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaa < 1:3416982‑M1/150‑73 (MQ=255) cGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaa > 1:1631235‑M1/1‑78 (MQ=255) gTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaat < 1:399055‑M1/150‑74 (MQ=255) gTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaat < 1:2390464‑M1/150‑74 (MQ=255) attGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACTTCCACTCAGACCATAGTCAGTGCCAGTTCCTGCAAGGTGGAATTCCGTCACGGTAACATGACGCTGGAAAAt < 1:3919011/149‑1 (MQ=255) ttGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatc < 1:1529676‑M1/150‑75 (MQ=255) ttGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatc < 1:3649771‑M1/150‑75 (MQ=255) tGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCAcc < 1:2133407/150‑1 (MQ=255) gAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatcca > 1:3308634‑M1/1‑74 (MQ=255) gAATTATTACCTGTAGAAACAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatcca < 1:96138‑M1/150‑77 (MQ=255) aaTTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGTGCCCTCTTT‑‑‑‑A‑‑TCCACTTCCACTCAGACCAGAGTCAGTGCCAGTTCCTGCAAAGTGGAATTCCGTCACGGTAACATGACGCTGGAAAATccat > 1:636158/1‑148 (MQ=255) aaTTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccat > 1:1748169‑M1/1‑73 (MQ=255) attattACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatc < 1:3176023‑M1/150‑79 (MQ=255) attattACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggcaacatgacgctggaaaatccatc < 1:2894169‑M1/150‑79 (MQ=255) attaCCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgcc > 1:1309718‑M1/1‑69 (MQ=255) taCCTGTAGAAATAACGCCGGATGAGCGGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccag < 1:3786627‑M1/150‑84 (MQ=255) ctgtagaaataacgccgGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTT‑‑‑‑A‑‑TCCACtaccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagc > 1:3697740‑M1/9‑64 (MQ=255) tgtagaaataacgccGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccatagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagct > 1:3498812‑M1/8‑63 (MQ=255) tgtagaaataacgccGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagct > 1:250897‑M1/8‑63 (MQ=255) gtagaaataacgcCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtagcatgacgctggaaaatccatcgccagagctg > 1:892012‑M1/7‑62 (MQ=255) gaaataaCGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctc > 1:1921043‑M1/4‑59 (MQ=255) agaTAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGgtgt < 1:1157749/150‑1 (MQ=255) aaataACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctca > 1:3114610‑M1/3‑58 (MQ=255) aatAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑CCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgcccac < 1:4226136‑M1/149‑94 (MQ=255) aTAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTg > 1:459271/1‑150 (MQ=255) aaCGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacgat < 1:1790129‑M1/150‑97 (MQ=255) aaCGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggt < 1:1133805‑M1/150‑97 (MQ=255) aCGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACctccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtg < 1:297718‑M1/150‑98 (MQ=255) cGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacgatgt < 1:810479‑M1/150‑99 (MQ=255) gCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgtt < 1:3542542‑M1/150‑100 (MQ=255) ccGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttg < 1:3845389‑M1/150‑101 (MQ=255) ggATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgat > 1:2936949‑M1/1‑48 (MQ=255) gATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGaa < 1:685076/150‑1 (MQ=255) gATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatc < 1:1381560‑M1/150‑104 (MQ=255) gATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatc < 1:1557015‑M1/150‑104 (MQ=255) gATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagaactgctcacggtgttgatc > 1:1585624‑M1/1‑47 (MQ=255) gATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccacgcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatc < 1:2165303‑M1/150‑104 (MQ=255) tGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatccg < 1:3002324‑M1/150‑106 (MQ=255) gAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAACTg > 1:3472818/1‑150 (MQ=255) cGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGa < 1:1082545/142‑1 (MQ=255) agaAAGAACCTGTGGCGGCCATTGCGCCGTCTTT‑‑‑‑A‑‑TCCACttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatccgtgaac < 1:1093046‑M1/149‑111 (MQ=255) | TCAATGATAATGTTATTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTT‑‑‑‑A‑‑TCCAC‑‑‑‑‑C‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAACTGAGTGGGAGGGGAAGATGATT > Xen14_126/1911‑2208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |