BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Xen14_180	= 526	0 (0.000)	90 (1.150)	67/234	0.0	100%	intergenic (–/–)	–/–	–/–
*	?	Xen14_197	= 402	0 (0.000)	90 (1.150)	67/234	0.0	100%	intergenic (–/–)	–/–	–/–

Only 100 of 109 total aligned reads displayed.

CGGATGTTGGGGCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCG  >  Xen14_197/254‑433

cGGATGTTGGGGCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCagag                                                                                                                                                <  1:2148353/150‑1 (MQ=255)

 ggATGTTGGGGCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAgg                                                                                                                                               <  1:1752418/150‑1 (MQ=255)

  gATGTTGGGGCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGc                                                                                                                                              <  1:1655473/150‑1 (MQ=255)

     gTTGGGGCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGtt                                                                                                                                           >  1:4213839/1‑150 (MQ=255)

      ttGGGGCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTc                                                                                                                                          <  1:2395219/150‑1 (MQ=255)

       tGGGGCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCACACCAGACGGGTTAACGACAGCAAAGGACCTTGCAGAGGCGTTCg                                                                                                                                         >  1:1233934/1‑150 (MQ=255)

            cTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCAt                                                                                                                                    >  1:1420239/1‑150 (MQ=39)

               gAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATtat                                                                                                                                 >  1:3504859/1‑150 (MQ=39)

               gAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAAACTTGCAGAGGCGTTCGAGCATtat                                                                                                                                 >  1:3504858/1‑150 (MQ=255)

                aaCCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATtata                                                                                                                                >  1:1020283/1‑150 (MQ=39)

                 aCCGAAGAGCAAGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGAAAAGAACCTTGCAGAGGCGTTCgcatattctca                                                                                                                               >  1:1944305/1‑140 (MQ=14)

                    gAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGa                                                                                                                            >  1:742716/1‑150 (MQ=39)

                       gagCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATg                                                                                                                         >  1:2443237/1‑150 (MQ=38)

                         gCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGc                                                                                                                       >  1:568417/1‑150 (MQ=37)

                           aCGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAAt                                                                                                                          <  1:3169548/145‑1 (MQ=35)

                           aCGGCGATGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACTAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAAc                                                                                                                              <  1:1153880/141‑1 (MQ=255)

                                 gTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCATACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCa                                                                                                                                     <  1:3047046/128‑1 (MQ=37)

                                   gCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttggggcattataacgaatggcatccgcatag                                                                                                             <  1:3852368‑M2/150‑37 (MQ=255)

                                   gCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatag                                                                                                             <  1:479050‑M2/150‑37 (MQ=255)

                                     ggAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtg                                                                                                           <  1:1425313‑M2/150‑39 (MQ=255)

                                        gTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcac                                                                                                        >  1:3910878‑M2/1‑109 (MQ=255)

                                          ccGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAg                                                                                                                                       <  1:2909420/117‑1 (MQ=38)

                                           cGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgg                                                                                                     <  1:727714‑M2/150‑45 (MQ=255)

                                              agagTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggtt                                                                                                  <  1:1179457‑M2/150‑48 (MQ=255)

                                               gagTAACGACATAGCAGAGAGCTTCGGGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggtta                                                                                                 >  1:3807057‑M2/1‑102 (MQ=255)

                                                agTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttat                                                                                                >  1:1100473‑M2/1‑101 (MQ=255)

                                                 gTAACGGCATAGCAGAGAGCTTCGTGGAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatc                                                                                               >  1:1945754‑M2/1‑100 (MQ=255)

                                                  tAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCGGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcg                                                                                              <  1:2967751‑M2/150‑52 (MQ=255)

                                                    aCGGCATAGCAGAGAGCTTCGTGAAAACGATGAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgct                                                                                            <  1:1691467‑M2/150‑54 (MQ=255)

                                                    aCGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgct                                                                                            <  1:1128621‑M2/150‑54 (MQ=255)

                                                           aGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAAACTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacg                                                                                     <  1:1163025‑M2/150‑61 (MQ=255)

                                                             cAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacggg                                                                                   >  1:3586329‑M2/1‑88 (MQ=255)

                                                               gagagCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaa                                                                                 >  1:2257686‑M2/1‑86 (MQ=255)

                                                                 gagCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaata                                                                               <  1:2531322‑M2/150‑67 (MQ=255)

                                                                 gagCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaata                                                                               <  1:2531320‑M2/150‑67 (MQ=255)

                                                                     ttCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaat                                                                                >  1:1414959‑M2/1‑80 (MQ=255)

                                                                         tGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggc                                                                       >  1:4185812‑M2/1‑76 (MQ=255)

                                                                          gAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctagggca                                                                      >  1:841741‑M2/1‑75 (MQ=255)

                                                                            aaaCGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagc                                                                    <  1:3354201‑M2/150‑78 (MQ=255)

                                                                            aaaCGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagc                                                                    >  1:1092162‑M2/1‑73 (MQ=255)

                                                                               cGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaag                                                                 <  1:1930970‑M2/150‑81 (MQ=255)

                                                                               cGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaag                                                                 <  1:1931006‑M2/150‑81 (MQ=255)

                                                                               cGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaag                                                                 <  1:1931007‑M2/150‑81 (MQ=255)

                                                                               cGATAAAGCGTGACTACATCAGGGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagggcactgggttatcgctcgccacgggaatatctacggcagcaag                                                                 >  1:4127189‑M2/1‑70 (MQ=255)

                                                                                gATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagc                                                                >  1:2026715‑M2/1‑69 (MQ=255)

                                                                                gATAAAGCGTGACGACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagc                                                                >  1:2026719‑M2/1‑69 (MQ=255)

                                                                                 aTAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagcc                                                               >  1:3667262‑M2/1‑68 (MQ=255)

                                                                                   aaaGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccag                                                             >  1:2004098‑M2/1‑66 (MQ=255)

                                                                                     aGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagta                                                           >  1:4060324‑M2/1‑64 (MQ=255)

                                                                                      gCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaa                                                          >  1:3320400‑M2/1‑63 (MQ=255)

                                                                                      gCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaa                                                          >  1:3251671‑M2/1‑63 (MQ=255)

                                                                                       cGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagcaagtaat                                                         <  1:4053912‑M2/150‑89 (MQ=255)

                                                                                        gTGACTACGTCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatg                                                        >  1:4075603‑M2/1‑61 (MQ=255)

                                                                                          gACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatggg                                                      <  1:3510128‑M2/150‑92 (MQ=255)

                                                                                          gACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatggg                                                      >  1:1409273‑M2/1‑59 (MQ=255)

                                                                                          gACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatggg                                                      >  1:2363821‑M2/1‑59 (MQ=255)

                                                                                          gACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatggg                                                      >  1:364449‑M2/1‑59 (MQ=255)

                                                                                          gACTACATCAGTGTCATGCCCAAACCAGACGGGNTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatggg                                                      >  1:1516254‑M2/1‑59 (MQ=255)

                                                                                           attatatcagtGTCATGCCCAAACCAGACGGGTTAACGGCAGAAAAGAACCTTGCAGAggcgttcgagcattataacggatgacatctgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggt                                                     >  1:3994704‑M2/6‑58 (MQ=255)

                                                                                                aTCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagt                                                >  1:1794844‑M2/1‑53 (MQ=255)

                                                                                                   aGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgat                                             >  1:1168928‑M2/1‑50 (MQ=255)

                                                                                                     tgtCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataa                                           >  1:1635742‑M2/1‑48 (MQ=255)

                                                                                                      gtCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataac                                          <  1:1587034‑M2/150‑104 (MQ=255)

                                                                                                      gtCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataac                                          <  1:3793920‑M2/150‑104 (MQ=255)

                                                                                                        cATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacag                                        <  1:1500269‑M2/150‑106 (MQ=255)

                                                                                                        cATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatacctacggcagcaagccagtaatgggttaagtgataacag                                        <  1:2228198‑M2/150‑106 (MQ=255)

                                                                                                           gCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtacactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtg                                     >  1:3728516‑M2/1‑42 (MQ=255)

                                                                                                             ccAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtc                                   <  1:459727‑M2/150‑111 (MQ=255)

                                                                                                              cAAACTAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgtgttaagtgataacaggtgtct                                  >  1:2285180‑M2/1‑39 (MQ=255)

                                                                                                               aaaCCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccatgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctg                                 <  1:1153409‑M2/150‑113 (MQ=255)

                                                                                                               aaaCCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccatgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctg                                 <  1:1153413‑M2/150‑113 (MQ=255)

                                                                                                               aaaCCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaaatgataacaggtgtctg                                 >  1:2520755‑M2/1‑38 (MQ=255)

                                                                                                                  ccAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaa                              >  1:3082126‑M2/1‑35 (MQ=255)

                                                                                                                   cAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaa                             >  1:2835381‑M2/1‑34 (MQ=255)

                                                                                                                   cAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaa                             >  1:1434498‑M2/1‑34 (MQ=255)

                                                                                                                   cAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaa                             >  1:3928324‑M2/1‑34 (MQ=255)

                                                                                                                   cAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatcagcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaa                             >  1:471162‑M2/1‑34 (MQ=255)

                                                                                                                    aGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaat                            <  1:2910856‑M2/150‑118 (MQ=255)

                                                                                                                    aGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaat                            >  1:409948‑M2/1‑33 (MQ=255)

                                                                                                                          gTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggg                      >  1:3915425‑M2/1‑27 (MQ=255)

                                                                                                                          gTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggg                      >  1:3676452‑M2/1‑27 (MQ=255)

                                                                                                                           ttAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatatagggg                     >  1:3587056‑M2/1‑26 (MQ=255)

                                                                                                                            tAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatgtctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggc                    >  1:1458112‑M2/1‑25 (MQ=255)

                                                                                                                            tAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggc                    <  1:1935788‑M2/150‑126 (MQ=255)

                                                                                                                            tAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggc                    >  1:3748464‑M2/1‑25 (MQ=255)

                                                                                                                             aaCGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggca                   >  1:1245253‑M2/1‑24 (MQ=255)

                                                                                                                               cGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaa                 <  1:2938750‑M2/150‑129 (MQ=255)

                                                                                                                                ggCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaat                >  1:811623‑M2/1‑21 (MQ=255)

                                                                                                                                ggCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaat                >  1:248400‑M2/1‑21 (MQ=255)

                                                                                                                                 gcagcaAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaatc               >  1:3101396‑M2/1‑20 (MQ=255)

                                                                                                                                   agcaAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaatcca             >  1:176200‑M2/1‑18 (MQ=255)

                                                                                                                                    gcaAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaatccag            <  1:4033747‑M2/150‑134 (MQ=255)

                                                                                                                                    gcaAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaat                            <  1:2615538‑M2/134‑118 (MQ=255)

                                                                                                                                      aaaGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaatccagaa          >  1:656001‑M2/1‑15 (MQ=255)

                                                                                                                                        aGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaatccagaagt        <  1:2955403‑M2/150‑138 (MQ=255)

                                                                                                                                           aCCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttacgtgataaccggtgtctggaaatatacgggcaaatccagaagttgg     <  1:1769972‑M2/150‑141 (MQ=255)

                                                                                                                                           aCCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtatggaaatataggggcaaatccagaagttgg     >  1:217494‑M2/1‑10 (MQ=255)

                                                                                                                                            ccTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaatccagaagttggc    <  1:5048‑M2/150‑142 (MQ=255)

                                                                                                                                            ccTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaatccagaagttggc    <  1:5052‑M2/150‑142 (MQ=255)

                                                                                                                                              ttGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaatccagaagttggcac  >  1:3462779‑M2/1‑7 (MQ=255)

CGGATGTTGGGGCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCG  >  Xen14_197/254‑433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.