New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_169 1 =0 (0.000)65 (0.350)
+AATACGGTTCTGACGAGCCGCTTA
47/248 2.7 100% intergenic (–/+5) –/Xen14_04775 –/IS66 family transposase ISCro1
?Xen14_193 = 444 0 (0.000)intergenic (–/–) –/– –/–

GTATTAATCGCATCCAGAGAAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGCCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_193/295‑444
                                                                                                                                                     |                                                                                                                                          
gtATTAATCGCATCCAGAGAAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCGGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACg                                                                                                                                            <  1:2079986/150‑1 (MQ=255)
gtATTAATCGCATCCAGAGAAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGCCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACg                                                                                                                                            >  1:4076611/1‑150 (MQ=255)
gtATTAATCGCATCCAGAGAAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGCCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACg                                                                                                                                            <  1:722070/150‑1 (MQ=255)
  aTTAATCGCATCCAGAGAAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGta                                                                                                                                          <  1:1565446‑M2/150‑3 (MQ=255)
  aTTAATCGCATCCAGAGAAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGta                                                                                                                                          <  1:1565448‑M2/150‑3 (MQ=255)
   ttAATCGCATCCAGAGAAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaa                                                                                                                                         <  1:2268562‑M2/150‑4 (MQ=255)
     aaTCGCATCCAGAGAAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagc                                                                                                                                       >  1:1354585‑M2/1‑145 (MQ=255)
      aTCGCATCCAGAGAAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcg                                                                                                                                      <  1:2839913‑M2/150‑7 (MQ=255)
        cGCATCCAGAGAAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTTTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggc                                                                                                                                    <  1:3391277‑M2/150‑9 (MQ=255)
        cGCATCCAGAGAAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggc                                                                                                                                    >  1:1657714‑M2/1‑142 (MQ=255)
          cATCCAGAGAAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctc                                                                                                                                  <  1:3469532‑M2/150‑11 (MQ=255)
           aTCCAGAGAAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcg                                                                                                                                 <  1:85188‑M2/150‑12 (MQ=255)
           aTCCAGAGAAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcg                                                                                                                                 <  1:2990352‑M2/150‑12 (MQ=255)
           aTCCAGAGAAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcg                                                                                                                                 <  1:85187‑M2/150‑12 (MQ=255)
                  gaAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaac                                                                                                                          >  1:1856573‑M2/1‑132 (MQ=255)
                  gaAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaac                                                                                                                          >  1:799821‑M2/1‑132 (MQ=255)
                        aaaTGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGAGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtatt                                                                                                                    >  1:3856369‑M2/1‑126 (MQ=255)
                        aaaGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtatt                                                                                                                    <  1:44538‑M2/150‑25 (MQ=255)
                           ggggCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgat                                                                                                                 <  1:3964784‑M2/150‑28 (MQ=255)
                           ggggCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccg                                                                                                                        <  1:2541680‑M2/143‑21 (MQ=255)
                                 aTTCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttac                                                                                                           <  1:2311675‑M2/150‑34 (MQ=255)
                                  ttCCCGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttact                                                                                                          >  1:616742‑M2/1‑116 (MQ=255)
                                    cccGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactga                                                                                                        >  1:3211992‑M2/1‑114 (MQ=255)
                                      cGGTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgaga                                                                                                      >  1:1798848‑M2/1‑112 (MQ=255)
                                       ggTAGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagag                                                                                                     >  1:1349115‑M2/1‑111 (MQ=255)
                                          aGTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTATACGtaagcggctcgtcagaaccgtattgatatttactgagagctc                                                                                                  >  1:84526‑M2/1‑108 (MQ=255)
                                           gTTACAGTGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctca                                                                                                 <  1:615467‑M2/150‑44 (MQ=255)
                                                  tGCAGTTATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaac                                                                                          >  1:1642489‑M2/1‑100 (MQ=255)
                                                        tATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttcca                                                                                    <  1:1524369‑M2/150‑57 (MQ=255)
                                                        tATTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttcca                                                                                    <  1:1524365‑M2/150‑57 (MQ=255)
                                                         aTTGATATGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccag                                                                                   >  1:2868493‑M2/1‑93 (MQ=255)
                                                              tatGTCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaa                                                                              <  1:2031683‑M2/150‑63 (MQ=255)
                                                                 gtctaGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacag                                                                           <  1:1455374‑M2/148‑66 (MQ=255)
                                                                 gtctaGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacag                                                                           <  1:44711‑M2/148‑66 (MQ=255)
                                                                    tAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagattaactttccagggcaacagatc                                                                        >  1:4240712‑M2/1‑82 (MQ=255)
                                                                            gtggtAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtaccc                                                                >  1:2917969‑M2/1‑74 (MQ=255)
                                                                              ggtAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccgg                                                              <  1:3776489‑M2/150‑79 (MQ=255)
                                                                              ggtAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccgg                                                              >  1:1483369‑M2/1‑72 (MQ=255)
                                                                              ggtAGCGTCACTCTGGAGTGTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccgg                                                              >  1:1617624‑M2/1‑72 (MQ=255)
                                                                              gggagcgTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccggattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccgg                                                              >  1:1617625‑M2/4‑72 (MQ=255)
                                                                                 aGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggttt                                                           >  1:2890779‑M2/1‑69 (MQ=255)
                                                                                 aGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggttt                                                           <  1:2998358‑M2/150‑82 (MQ=255)
                                                                                   cGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgc                                                         <  1:946841‑M2/150‑84 (MQ=255)
                                                                                      cACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccgg                                                      >  1:2669472‑M2/1‑64 (MQ=255)
                                                                                      cACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccgg                                                      >  1:2669471‑M2/1‑64 (MQ=255)
                                                                                       aCTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggc                                                     >  1:1479121‑M2/1‑63 (MQ=255)
                                                                                       aCTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggc                                                     >  1:755347‑M2/1‑63 (MQ=255)
                                                                                        ctctGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggcc                                                    <  1:2917856‑M2/150‑89 (MQ=255)
                                                                                         tctGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggcca                                                   <  1:931390‑M2/150‑90 (MQ=255)
                                                                                               gTTTACGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctg                                             <  1:4086047‑M2/150‑96 (MQ=255)
                                                                                               gTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctg                                             <  1:3652441‑M2/150‑96 (MQ=255)
                                                                                                tttAAGATTTTCCAGAGAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctgg                                            >  1:1462363‑M2/1‑54 (MQ=255)
                                                                                                tttAAGATTTTCCAGAGAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctgg                                            >  1:1462361‑M2/1‑54 (MQ=255)
                                                                                                 gatattgtttgcagaaaGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctgga                                           >  1:2965365‑M2/8‑53 (MQ=255)
                                                                                                  tAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggat                                          >  1:3589122‑M2/1‑52 (MQ=255)
                                                                                                  tAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggat                                          >  1:3779719‑M2/1‑52 (MQ=255)
                                                                                                  tAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggat                                          >  1:477715‑M2/1‑52 (MQ=255)
                                                                                                  tAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggat                                          >  1:311585‑M2/1‑52 (MQ=255)
                                                                                                   aaGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggata                                         <  1:3346633‑M2/150‑100 (MQ=255)
                                                                                                       ttttCCAGAAAGGCAATCAGGGGGCATGCAATAGCACCGGCTGTACGtaagcggctcgtcagagccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcttacccggtttgccggccagtcctggatatgct                                     >  1:3575848‑M2/1‑47 (MQ=255)
                                                                                                       ttttCCAGAAAGGCAATCAGGGGGCAGGCAATATCACTGACTGTACGtaagcggctcgtcagaaccgtattgatatttaccgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatact                                     <  1:1441563‑M2/150‑104 (MQ=255)
                                                                                                       ttttCCAGAAAGGCAATAAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgct                                     <  1:2148345‑M2/150‑104 (MQ=255)
                                                                                                        tttCCAGAAAGGCAATCAGGGGGCAGGCAATATCATCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctc                                    >  1:3947826‑M2/1‑46 (MQ=255)
                                                                                                        tttCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccgg                                                      >  1:2481777‑M2/1‑46 (MQ=255)
                                                                                                            cAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtactcggtctgccggccagtcctggatatgctcaatg                                <  1:3719149‑M2/150‑109 (MQ=255)
                                                                                                            cAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatg                                <  1:3558620‑M2/150‑109 (MQ=255)
                                                                                                             aGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatga                               >  1:4167314‑M2/1‑41 (MQ=255)
                                                                                                              gAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatgac                              <  1:1629164‑M2/150‑111 (MQ=255)
                                                                                                              gAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggat                                          >  1:3431203‑M2/1‑40 (MQ=255)
                                                                                                                aaGGCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatgacgt                            >  1:4236107‑M2/1‑38 (MQ=255)
                                                                                                                   gCAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatgacgtagc                         <  1:2730103‑M2/150‑116 (MQ=255)
                                                                                                                    cAATCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatgacgtagcg                        <  1:2587639‑M2/150‑117 (MQ=255)
                                                                                                                     aaTCAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatgacgtagcgc                       <  1:3290959‑M2/150‑118 (MQ=255)
                                                                                                                        cAGGGGGCAGGCAATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatgacgtagcgcagc                    <  1:2131294‑M2/150‑121 (MQ=255)
                                                                                                                                aggcaATATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgcacccggtttgccggccagtcctggatatgctcaatgacgtagcgcagccacttttc            <  1:89056‑M2/150‑129 (MQ=255)
                                                                                                                                    aaTATCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatgacgtagcgcagccacttttctggc        >  1:1298399‑M2/1‑18 (MQ=255)
                                                                                                                                     atatCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatgacgtagcgcagccacttttctggct       >  1:3235063‑M2/1‑17 (MQ=255)
                                                                                                                                     atatCACCGACTGTACGtaagcggctcgtcagaaccgtattgatattcactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatgacgtagcgcagccacttttctggct       <  1:4023300‑M2/150‑134 (MQ=255)
                                                                                                                                      tatCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatgacgtagcgcagccacttttctggcta      >  1:3340506‑M2/1‑16 (MQ=255)
                                                                                                                                       atCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatgacgtagcgcagccacttttctggctcc     <  1:1255412‑M2/150‑136 (MQ=255)
                                                                                                                                       atCACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatgacgtagcgcagccacttttctggctcc     >  1:2641183‑M2/1‑15 (MQ=255)
                                                                                                                                         cACCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatgacgtagcgcagccacttttctggctccac   >  1:1089681‑M2/1‑13 (MQ=255)
                                                                                                                                          aCCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatgacgtagcgcagccacttttctggctccaca  <  1:2728212‑M2/150‑139 (MQ=255)
                                                                                                                                          aCCGACTGTACGtaagcggctcgtcagaaccgtattgatatttactgagagctcagatcaactttccagggcaacagatcgcgtacccggtttgccggccagtcctggatatgctcaatgacgtagcgcagccacttttctggctccaca  <  1:2728213‑M2/150‑139 (MQ=255)
                                                                                                                                                     |                                                                                                                                          
GTATTAATCGCATCCAGAGAAACTAAAGGGGCCATTCCCGGTAGTTACAGTGCAGTTATTGATATGCCTAGTGGTGGTGGTAGCGTCACTCTGGAGTTTAAGATTTTCCAGAAAGGCAATCAGGGGGCAGGCAATATCACCGACTGTACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_193/295‑444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.