New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Xen14_168	= 298	2043 (1.210)	84 (0.100)	57/296	0.1	3.9%	coding (221/459 nt)	Xen14_04774	IS200/IS605 family transposase IS200C
	?	Xen14_94	7510 =	NA (NA)					intergenic (‑130/–)	Xen14_04561/–	hypothetical protein/–
Rejected: Frequency below/above cutoff threshold.

GGTGTGGGATGTACGTTCATTACCTGCTCAAGAATTTGAGCATTCTCACTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTGGGGGTAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_94/7361‑7584                                                                                                                                                      |                                                                                         ggTGTGGGATGTACGTTCATTACCTGCTCAAGAATTTGAGCATTCTCACTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACt                                                                                          <  1:3457739/150‑1 (MQ=255)          tGTACGTTCATTACCTGCTCAAGAATTTGAGCATTCTCACTTCCCTTTGTTTGCATATTGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTc                                                                                 <  1:3106800/150‑1 (MQ=255)           gTACGTTCATTACCTGCTCAAGAATTTGAGCATTCTCACTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTca                                                                                <  1:2653000/150‑1 (MQ=255)           gTACGTTCATTACCTGCTCAAGAATTTGAGCATTCTCACTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTca                                                                                <  1:2652999/150‑1 (MQ=255)                      aCCTGCTCAAGAATTTGAGCATTCTCACTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACGGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTgg                                                                     <  1:3085302/150‑1 (MQ=255)                      aCCTGCTCAAGAATTTGAGCATTCTCACTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTgg                                                                     <  1:848390/150‑1 (MQ=255)                          gCTCAAGAATTTGAGCATTCTCACTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGGTCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCAc                                                                 >  1:3575139/1‑150 (MQ=255)                          gCTCAAGAATTTGAGCATTCTCACTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCAc                                                                 >  1:2549078/1‑150 (MQ=255)                            tCAAGAATTTGAGCATTCTCACTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACcg                                                               >  1:1522202/1‑150 (MQ=255)                              aaGAATTTGAGCATTCTCACTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACcgcg                                                             >  1:1144617/1‑150 (MQ=255)                              aaGAATTTGAGCATTCTCACTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACcgcg                                                             >  1:2408177/1‑150 (MQ=255)                                   tttGAGCATTCTCACTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTaga                                                        <  1:899250/150‑1 (MQ=255)                                         cagtctcACTTCCATTTGTTTGCAGATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGGTAGTGttttt                                                  <  1:3062765/147‑1 (MQ=255)                                         cATTCTCACTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGttttt                                                  <  1:2637960/150‑1 (MQ=255)                                            tctcACTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCa                                               >  1:1739597/1‑150 (MQ=255)                                             ttaaCTTCCCTTTGTTTGTATATCGGGAGAATCAAGGACTTATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAATTGAAGTGGTCAACAAAAACTTGCCACCGCGTTAGAGTTTTTCCAg                                              <  1:3941764/147‑1 (MQ=38)                                              tcACTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGt                                             >  1:67775/1‑150 (MQ=255)                                                 cTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTCCCAGTATc                                          <  1:2849401/150‑1 (MQ=255)                                                      cTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGAttt                                     >  1:583467/1‑150 (MQ=255)                                                         tgtttgCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTcc                                  <  1:3176750/150‑1 (MQ=255)                                                         tgtttgCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTcc                                  <  1:328484/150‑1 (MQ=255)                                                                    cGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTgg                       >  1:4230846/1‑150 (MQ=255)                                                                     gggAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTggg                      <  1:3122163/150‑1 (MQ=255)                                                                      ggAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTgggg                     <  1:982264/150‑1 (MQ=255)                                                                      ggAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTgggg                     <  1:982266/150‑1 (MQ=255)                                                                      ggAGAATCAAGGAAGGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAGCAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTgggg                     <  1:1337002/150‑1 (MQ=255)                                                                           aTCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTGGGGGTAAc                >  1:1712998/1‑150 (MQ=255)                                                                           aTCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTGGGGGTAAc                <  1:127093/150‑1 (MQ=255)                                                                           aTCAAGGAATGATTGGTTGCCATCATCGTTAGGATCAAACTCACGAATACAGCGTTTCGCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTGGGGGTAAc                <  1:2266610/150‑1 (MQ=255)                                                                             cAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACCAAAACTGGCCACCGCGTTAGAGTTTTTCAAGTATCGATTTTCCGCTTCTTTTGGGGGTAAccc              >  1:3587238/1‑148 (MQ=37)                                                                             cAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGACTCGTTTGGGGGTAAccc              <  1:3327549/150‑3 (MQ=255)                                                                               aGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTGGGGGTAAcccac            >  1:3225199/1‑146 (MQ=255)                                                                               aGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTGGGGGTAAcccac            <  1:4074720/150‑5 (MQ=255)                                                                                 gAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTGGGGGTAAcccacca          >  1:2795806/1‑144 (MQ=255)                                                                                    tGATTGGTTGCCATCATCGTTGGGATCAAACTCACGCATACAGCGTTTCTCAATAGTAGAAAGAAATGAAGTGGTCAACAAAAACTGGCCACAGCGTCAGAGTTTTTCCAGTATCGATTTTCAGATTCGTTTGGGGGTAAcccaccctta       >  1:1256229/1‑141 (MQ=21)                                                                                    tGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTGGGGGTAAcccaccatta       >  1:1256228/1‑141 (MQ=255)                                                                                     gATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTGGGGGTAAcccaccattat      <  1:3941698/150‑11 (MQ=255)                                                                                      aTTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTGGGGGTAAcccaccattata     <  1:3949237/150‑12 (MQ=255)                                                                                       ttGGCTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTGGGGGTAAcccaccattatat    <  1:1394663/150‑13 (MQ=21)                                                                                         ggTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAGGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTGGGGGTAAcccaccactatattc  <  1:825976/150‑15 (MQ=21)                                                                                                                                                      |                                                                                         GGTGTGGGATGTACGTTCATTACCTGCTCAAGAATTTGAGCATTCTCACTTCCCTTTGTTTGCATATCGGGAGAATCAAGGAATGATTGGTTGCCATCATCGTTGGGATCAAACTCACGAATACAGCGTTTCTCAATAGTAGAAAGAACTGAAGTGGTCAACAAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGATTTTCCGATTCGTTTGGGGGTAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_94/7361‑7584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.