New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_168 1 =0 (0.000)59 (0.080) 34/242 2.1 100% intergenic (–/+59) –/Xen14_04774 –/IS200/IS605 family transposase IS200C
?Xen14_46 = 40324 0 (0.000)intergenic (‑92/–) Xen14_03701/– hypothetical protein/–

ATTAATCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_46/40176‑40351
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aTTAATCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCACATGCGCCTATAAGGc                                                                                                 >  1:2460141/1‑150 (MQ=255)
aTTAATCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGc                                                                                                 >  1:2460140/1‑150 (MQ=255)
    aTCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTGTTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCAGAGGTTTTTCAAATGCGCCTATAAGGctctc                                                                                             >  1:4026865/1‑150 (MQ=255)
    aTCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctc                                                                                             >  1:3498659/1‑150 (MQ=255)
    aTCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctc                                                                                             >  1:358294/1‑150 (MQ=255)
    aTCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctc                                                                                               <  1:2543994/148‑1 (MQ=255)
      cAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCtt                                                                                           >  1:954448/1‑150 (MQ=255)
       aaaTCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTa                                                                                          >  1:4047698/1‑150 (MQ=255)
         aTCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTAcc                                                                                        >  1:1825692/1‑150 (MQ=255)
          tCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCa                                                                                       <  1:1679761/150‑1 (MQ=255)
           ccAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAg                                                                                      <  1:1838782/150‑1 (MQ=255)
            cAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTACAAGGCTCTCTTACCAGc                                                                                     >  1:4172071/1‑150 (MQ=255)
                ccTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCcgcg                                                                                 <  1:2401486/150‑1 (MQ=255)
                   tcgtcgCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGccc                                                                              <  1:859159/150‑1 (MQ=255)
                        gCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCTAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACa                                                                         <  1:1689561/150‑1 (MQ=255)
                         cTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAg                                                                        >  1:1161920/1‑150 (MQ=255)
                           ttCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggc                                                                      >  1:1973359‑M2/1‑122 (MQ=255)
                              gagaGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgca                                                                   >  1:1134456‑M2/1‑119 (MQ=255)
                               agagCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcac                                                                  <  1:2754507‑M2/150‑33 (MQ=255)
                                  gCCTCCATTCCCCATGAACCCATTTTGTATCCTCACCTGTTATTTCAGTAGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacagacgcacacg                                                               <  1:3408516‑M2/150‑36 (MQ=255)
                                   ccTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacga                                                              <  1:794806‑M2/150‑37 (MQ=255)
                                    cTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCATTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcac                                                                  >  1:79710‑M2/1‑113 (MQ=255)
                                    cTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcac                                                                  >  1:189776‑M2/1‑113 (MQ=255)
                                    cTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcac                                                                  >  1:189780‑M2/1‑113 (MQ=255)
                                    cTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcac                                                                  >  1:189779‑M2/1‑113 (MQ=255)
                                       cATTCCCCCTGCACCCATTTTGTATCCTTACCTGTTATTTCCGTCGACCTAGCATTATTCAATAACTACCCTCCGGCATAGCAGGAGTTTTTTCAAATGCGCCTACAAGGCTCTATTTCCAGCCGCGCCCTAACAggcgcacacgatctg                                                          >  1:2499847/1‑137 (MQ=12)
                                       cATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctg                                                          <  1:2499851‑M2/150‑41 (MQ=255)
                                       cATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctg                                                          <  1:2499846‑M2/150‑41 (MQ=255)
                                         ttCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATAGCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgac                                                        >  1:3173549‑M2/1‑108 (MQ=255)
                                                tGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgca                                                 >  1:2934988‑M2/1‑101 (MQ=255)
                                                    cccATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatcca                                             <  1:1810139‑M2/150‑54 (MQ=255)
                                                     ccATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctaac                                                        <  1:1595898‑M2/138‑43 (MQ=255)
                                                      cATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaac                                           >  1:2932191‑M2/1‑95 (MQ=255)
                                                         tttGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttc                                        <  1:690126‑M2/150‑59 (MQ=255)
                                                          ttGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcg                                       >  1:2670912‑M2/1‑91 (MQ=255)
                                                          gggtaTCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcg                                       >  1:1686015‑M2/3‑91 (MQ=255)
                                                           tGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAATGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgt                                      >  1:3361330‑M2/1‑90 (MQ=255)
                                                           tGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgt                                      >  1:219‑M2/1‑90 (MQ=255)
                                                            gTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgtt                                     >  1:2753012‑M2/1‑89 (MQ=255)
                                                            gTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgtt                                     >  1:1228319‑M2/1‑89 (MQ=255)
                                                            gTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgtt                                     >  1:1406519‑M2/1‑89 (MQ=255)
                                                             tATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgtta                                    >  1:2923791‑M2/1‑88 (MQ=255)
                                                               tCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttact                                  >  1:3055240‑M2/1‑86 (MQ=255)
                                                                ccTTACCTGTTATTTCAGTCGAAATAGTAGTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttactt                                 >  1:3800925‑M2/1‑85 (MQ=255)
                                                                 ctgacatgttattTCAGTCGAAATAGTATTATTCAACAACTATCCTCCTGTATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccacgccctaacaggcgcacacgatctgacatttgcatccaacttcgttactt                                 >  1:4002073‑M2/7‑84 (MQ=255)
                                                                      cTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcattacttacggcc                           >  1:1917022‑M2/1‑79 (MQ=255)
                                                                      cTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcattacttacggcc                           >  1:1917018‑M2/1‑79 (MQ=255)
                                                                      cTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgat                                                             <  1:4107692‑M2/116‑38 (MQ=255)
                                                                       tGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggccc                          <  1:2408576‑M2/150‑73 (MQ=255)
                                                                        gTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAGATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacattagcatccaacttcgttacttacggcccg                         >  1:873107‑M2/1‑77 (MQ=255)
                                                                              tCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacg                   >  1:4214177‑M2/1‑71 (MQ=255)
                                                                               cAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgg                  >  1:1303437‑M2/1‑70 (MQ=255)
                                                                                aGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGTAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacggg                 >  1:653368‑M2/1‑69 (MQ=255)
                                                                                aGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacggg                 >  1:3232680‑M2/1‑69 (MQ=255)
                                                                                aGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacggg                 >  1:1283804‑M2/1‑69 (MQ=255)
                                                                                aGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacggg                 >  1:653367‑M2/1‑69 (MQ=255)
                                                                                aGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacggg                 >  1:653364‑M2/1‑69 (MQ=255)
                                                                                aGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacggg                 >  1:653362‑M2/1‑69 (MQ=255)
                                                                                aGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacggg                 >  1:653361‑M2/1‑69 (MQ=255)
                                                                                aGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacggg                 >  1:1316840‑M2/1‑69 (MQ=255)
                                                                                aGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacggg                 >  1:1316841‑M2/1‑69 (MQ=255)
                                                                                aGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacggg                 >  1:3566363‑M2/1‑69 (MQ=255)
                                                                                aGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgaacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacggg                 >  1:1173177‑M2/1‑69 (MQ=255)
                                                                                 gTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCGAATGCGCCTATAAGGctctcttatcagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggc                >  1:864331‑M2/1‑68 (MQ=255)
                                                                                 gTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggc                >  1:1491118‑M2/1‑68 (MQ=255)
                                                                                  tCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggct               <  1:2930015‑M2/150‑84 (MQ=255)
                                                                                   cGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctg              <  1:3854019‑M2/150‑85 (MQ=255)
                                                                                    gAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgt             >  1:1790976‑M2/1‑65 (MQ=255)
                                                                                          gTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggat       <  1:3962340‑M2/150‑92 (MQ=255)
                                                                                           tattatTCAAGAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggata      >  1:4236023‑M2/1‑58 (MQ=255)
                                                                                           tattatGCAATAAATACCCGCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttgcttacggcccgtaaacgtgctgcccggata      >  1:3643137‑M2/1‑58 (MQ=255)
                                                                                            attattCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatag     >  1:1119464‑M2/1‑57 (MQ=255)
                                                                                            attattCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatag     >  1:1119466‑M2/1‑57 (MQ=255)
                                                                                            attattCAATAAATATCCTCCGGCATAGCAGGAGGTTTTTCAAATGCGCCTATAAGGctctcttactagccgcgccctaacaggcgcacacgatctgacatttgcatccagcttcgttacttacggcccgtaaacgggctgcccggatag     >  1:3949927‑M2/1‑57 (MQ=255)
                                                                                             ttattCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagg    >  1:1522822‑M2/1‑56 (MQ=255)
                                                                                               attCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggataggga  <  1:2445291‑M2/150‑97 (MQ=255)
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ATTAATCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_46/40176‑40351

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.