New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_126 = 2082203 (0.720)735 (1.590)
+TTCCACTCAGACCAGAGTCAGTGCCAGTTCCTGCAAGGTGGAATTCC
130/202 0.0 91.4% coding (296/420 nt) Xen14_04726 hypothetical protein
?Xen14_206 = 403 0 (0.000)intergenic (+94/–) Xen14_04788/– hypothetical protein/–

Only 100 of 1188 total aligned reads displayed.

TTGAAGGATTTACGCATATCGGTAACGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_206/254‑403
                                                                                                                                                     |                                                                                                                                                 
ttGAAGGATTTACGCATATCGGTAACGCCGGCAACGAGCCAGATACGGGTACCTGATGGAAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGAc                                                                                                                                                   >  1:1037993/1‑150 (MQ=255)
ttGAAGGATTTACACATATCGGTAACGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAAATCATCTTCCCCTCCCGCTCAGTTCGCGGATTAACATCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGAc                                                                                                                                                   >  1:1942546/1‑150 (MQ=14)
  gAAGGATTTACGCATATCGGTAACGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCNGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACgg                                                                                                                                                 <  1:3747688‑M2/150‑3 (MQ=255)
  gAAGGATTTACGCATATCGGTAACGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCGCGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACgg                                                                                                                                                 >  1:1620361‑M2/1‑148 (MQ=255)
     ggATTTACGCATATCGGTAACGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaat                                                                                                                                              >  1:3813256‑M2/1‑145 (MQ=255)
      gATTTACGCATATCGGTAACGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaatt                                                                                                                                             >  1:1687797‑M2/1‑144 (MQ=255)
       aTTTACGCATATCGGTAACGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattc                                                                                                                                            <  1:4086210‑M2/150‑8 (MQ=255)
        tttACACATATCGGTAACGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAAATCATCTTCCCCTCCCGCTCAGTTCGCGGATTAACATCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattcc                                                                                                                                           >  1:1114107‑M2/1‑142 (MQ=255)
          tACGCATATCGGTAACGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccac                                                                                                                                         >  1:2973073‑M2/1‑140 (MQ=255)
          tACGCATATCGGTAACGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccac                                                                                                                                         >  1:1090428‑M2/1‑140 (MQ=255)
               atatCGGTAACGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgc                                                                                                                                    <  1:1212822‑M2/150‑16 (MQ=255)
               atatCGGTAACGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAACTCATCTTCCCCTCCCGCTCAGTTCGCGGATTAACATCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgc                                                                                                                                    <  1:4215989‑M2/150‑16 (MQ=255)
                    ggTAACGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaa                                                                                                                               <  1:1150557‑M2/150‑21 (MQ=255)
                       aaCGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactg                                                                                                                            <  1:2623143‑M2/150‑24 (MQ=255)
                         cGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggc                                                                                                                          >  1:640305‑M2/1‑125 (MQ=255)
                         cGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggc                                                                                                                          >  1:2812389‑M2/1‑125 (MQ=255)
                           ccGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcac                                                                                                                        <  1:1824352‑M2/150‑28 (MQ=255)
                           ccGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcac                                                                                                                        >  1:4047996‑M2/1‑123 (MQ=255)
                           ccGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcac                                                                                                                        <  1:1249637‑M2/150‑28 (MQ=255)
                           ccGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcac                                                                                                                        <  1:1179638‑M2/150‑28 (MQ=255)
                             ggCAACGAGCCAGATACGGGTACCTGATGGGAGTGAAATCATCTTCCCCTCCCGCTCAGTTCGCGGATTAACATCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactg                                                                                                                      >  1:4004494‑M2/1‑121 (MQ=255)
                               cAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCTATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgac                                                                                                                    <  1:485876‑M2/150‑32 (MQ=255)
                               cAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgac                                                                                                                    >  1:2536202‑M2/1‑119 (MQ=255)
                               cAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgac                                                                                                                    <  1:2413081‑M2/150‑32 (MQ=255)
                               cAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgac                                                                                                                    <  1:275416‑M2/150‑32 (MQ=255)
                                cgacagaatttcgaaggtacctgatgggagtgAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgact                                                                                                                   >  1:3602618‑M2/16‑118 (MQ=255)
                                  cGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactct                                                                                                                 >  1:1000073‑M2/1‑116 (MQ=255)
                                   gAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctg                                                                                                                <  1:1474466‑M2/150‑36 (MQ=255)
                                    aGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctgg                                                                                                               >  1:4134292‑M2/1‑114 (MQ=255)
                                    aGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaagaactggcactgactctgg                                                                                                               >  1:2865968‑M2/1‑114 (MQ=255)
                                    aGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTACCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctgg                                                                                                               >  1:3696837‑M2/1‑114 (MQ=255)
                                      ccAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtc                                                                                                             >  1:3517851‑M2/1‑112 (MQ=255)
                                        aGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctg                                                                                                           >  1:2390285‑M2/1‑110 (MQ=255)
                                        aGATACGGATACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctg                                                                                                           >  1:2319817‑M2/1‑110 (MQ=255)
                                           tACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattctaccttgcaggaactggcactgactctggtctgagt                                                                                                        <  1:1412217‑M2/150‑44 (MQ=255)
                                            aCGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtg                                                                                                       >  1:2149324‑M2/1‑106 (MQ=255)
                                             cGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtgg                                                                                                      <  1:3567017‑M2/150‑46 (MQ=255)
                                              gggTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtgga                                                                                                     >  1:699538‑M2/1‑104 (MQ=255)
                                              gggTACCTGATGGGAGTGAAATCATCTTCCCCTCCCGCTCAGTTCGCGGATTAACATCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtgga                                                                                                     <  1:1547151‑M2/150‑47 (MQ=255)
                                                 tACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagt                                                                                                  >  1:1639051‑M2/1‑101 (MQ=255)
                                                  aCCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtg                                                                                                 >  1:3421135‑M2/1‑100 (MQ=255)
                                                   ccTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtgg                                                                                                <  1:1977382‑M2/150‑52 (MQ=255)
                                                   ccTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtgg                                                                                                <  1:1667717‑M2/150‑52 (MQ=255)
                                                   ccTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagcggaagtgg                                                                                                >  1:2021293‑M2/1‑99 (MQ=255)
                                                     tGATGGGAGTGAGATCATCTTCCCCTTCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGTGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggat                                                                                              >  1:2264848‑M2/1‑97 (MQ=255)
                                                     tGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccacctagcaggaactggcactgactctggtctgagtggaagtggat                                                                                              <  1:3458671‑M2/150‑54 (MQ=255)
                                                     tGATGGGAGTGAAATCATCTTCCCCTCCCGCTCAGTTCGCGGATTAACATCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggat                                                                                              >  1:2928272‑M2/1‑97 (MQ=255)
                                                      gATGGGAGTGAGATCATCTTCCCCTCCCGGTCANTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggata                                                                                             >  1:1516497‑M2/1‑96 (MQ=255)
                                                            aGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatg                                                                                       >  1:2893095‑M2/1‑90 (MQ=255)
                                                             gTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatgg                                                                                      <  1:3647043‑M2/150‑62 (MQ=255)
                                                             gTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatgg                                                                                      >  1:3136995‑M2/1‑89 (MQ=255)
                                                             gTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatgg                                                                                      >  1:1322938‑M2/1‑89 (MQ=255)
                                                             gTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatgg                                                                                      <  1:762873‑M2/150‑62 (MQ=255)
                                                               gagaTCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcg                                                                                    <  1:792954‑M2/150‑64 (MQ=255)
                                                                agaTCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGTTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgc                                                                                   <  1:2053752‑M2/150‑65 (MQ=255)
                                                                agaTCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgc                                                                                   <  1:3236244‑M2/150‑65 (MQ=255)
                                                                    catcTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatg                                                                               >  1:2445515‑M2/1‑82 (MQ=255)
                                                                      tcTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACGGTAACggaattccaccttgcaggaactggcactgactctggtctaagtggaagtggataaagatggcgcaatggc                                                                             <  1:2715875‑M2/150‑71 (MQ=255)
                                                                      tcTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggc                                                                             >  1:1276954‑M2/1‑80 (MQ=255)
                                                                      tcTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCATGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagacggcgcaatggc                                                                             <  1:588823‑M2/150‑71 (MQ=255)
                                                                        ttCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccg                                                                           <  1:3944901‑M2/150‑73 (MQ=255)
                                                                        atcCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccg                                                                           >  1:1364949‑M2/2‑78 (MQ=255)
                                                                        atcCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccg                                                                           >  1:3768040‑M2/2‑78 (MQ=255)
                                                                          ccccTCCCGGTCAGTTCACGGATCTACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagacggcgcaatggccgcc                                                                         >  1:3491918‑M2/1‑76 (MQ=255)
                                                                          ccccTCCCGCTCAGTTCGCGGATTAACATCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagacggcgcaatggccgcc                                                                         <  1:2086310‑M2/150‑75 (MQ=255)
                                                                                        ttCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccagcttgcaggaactggcactgactctggtctgagtggaagtggataaagacggcgcaatggccgccacaggttctttctg                                                           >  1:3878414‑M2/1‑62 (MQ=255)
                                                                                              gATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgcgtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatc                                                     <  1:2165303‑M2/150‑95 (MQ=255)
                                                                                               aTCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatcc                                                    >  1:1860097‑M2/1‑55 (MQ=255)
                                                                                                 cAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccgg                                                  <  1:1796939‑M2/150‑98 (MQ=255)
                                                                                                 cAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccgg                                                  <  1:1909903‑M2/150‑98 (MQ=255)
                                                                                                  aaCACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggc                                                 <  1:2347791‑M2/150‑99 (MQ=255)
                                                                                                  aaCACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggc                                                 <  1:2220893‑M2/150‑99 (MQ=255)
                                                                                                   acacCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcg                                                >  1:908760‑M2/1‑51 (MQ=255)
                                                                                                          gAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttc                                         <  1:4178564‑M2/150‑107 (MQ=255)
                                                                                                             cagcTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctat                                      >  1:1763812‑M2/1‑41 (MQ=255)
                                                                                                              agcTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtgggagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctaca                                     <  1:870831‑M2/150‑111 (MQ=255)
                                                                                                              agcTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctaca                                     >  1:250897‑M2/1‑40 (MQ=255)
                                                                                                              agcTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagacggcgcaatggccgccacaggttctttctgctcatccggcgttatttctaca                                     >  1:989037‑M2/1‑40 (MQ=255)
                                                                                                                ctctGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacagg                                   >  1:3378004‑M2/1‑38 (MQ=255)
                                                                                                                   tGGCGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggtcctttctgctcatccggcgttatttctacaggtaa                                >  1:456660‑M2/1‑35 (MQ=255)
                                                                                                                      cGATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataa                             <  1:821588‑M2/150‑119 (MQ=255)
                                                                                                                       gATGGATTTTCCAGCGTCATGTTATCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataat                            >  1:1737886‑M2/1‑31 (MQ=255)
                                                                                                                       gATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataat                            <  1:3337734‑M2/150‑120 (MQ=255)
                                                                                                                       gATGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataat                            <  1:3176023‑M2/150‑120 (MQ=255)
                                                                                                                        aTGGATTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataatt                           >  1:3012394‑M2/1‑30 (MQ=255)
                                                                                                                          ggATTTTCCAGCTTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataattca                         >  1:2110952‑M2/1‑28 (MQ=255)
                                                                                                                            aTTTTCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctca                                                       >  1:3096932‑M2/1‑26 (MQ=255)
                                                                                                                               ttCCAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataattcaacgcc                    >  1:3276132‑M2/1‑23 (MQ=255)
                                                                                                                                 ccAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataattcaacgccag                  >  1:723076‑M2/1‑21 (MQ=255)
                                                                                                                                  cAGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataattcaacgccagt                 <  1:1577957‑M2/150‑131 (MQ=255)
                                                                                                                                   aGCGTCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataattcaacgccagtg                >  1:516874‑M2/1‑19 (MQ=255)
                                                                                                                                       tCATGTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataattcaacgccagtgtcag            >  1:96671‑M2/1‑15 (MQ=255)
                                                                                                                                           gTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataattcaacgccagtgtcagaaga        >  1:2586856‑M2/1‑11 (MQ=255)
                                                                                                                                           gTTACCGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagacggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataattcaacgccagtgtcagaaga        >  1:1724274‑M2/1‑11 (MQ=255)
                                                                                                                                               ccGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataattcaacgccagtgtcagaagaggtc    >  1:2680689‑M2/1‑7 (MQ=255)
                                                                                                                                               ccGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataattcaacgccagtgtcagaagagg      >  1:247477‑M2/1‑7 (MQ=255)
                                                                                                                                                cGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataattcaacgccagtgtcagaagaggtcg   >  1:3058891‑M2/1‑6 (MQ=255)
                                                                                                                                                cGTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataattcaacgccagtgtcagaagaggtcg   >  1:3853579‑M2/1‑6 (MQ=255)
                                                                                                                                                 gTGACggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagacggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataattcaacgccagtgtcagaagaggtcgt  >  1:2649411‑M2/1‑5 (MQ=255)
                                                                                                                                                    aCggaattccaccttgcaggaactggcactgactctggtctgagtggaagtggataaagatggcgcaatggccgccacaggttctttctgctcatccggcgttatttctacaggtaataattcaacgccagtgtcagaagag       <  1:56131‑M2/142‑141 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
TTGAAGGATTTACGCATATCGGTAACGCCGGCAACGAGCCAGATACGGGTACCTGATGGGAGTGAGATCATCTTCCCCTCCCGGTCAGTTCACGGATCAACACCGTGAGCAGCTCTGGCGATGGATTTTCCAGCGTCATGTTACCGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_206/254‑403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.