New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_108 98 =104 (0.920)48 (0.460)
+AAAGAAAAACTTTATG
32/264 2.6 34.6% intergenic (–/‑223) –/Xen14_04652 –/hypothetical protein
?Xen14_75 = 12952 99 (0.820)intergenic (+626/–) Xen14_04344/– hypothetical protein/–

Only 100 of 149 total aligned reads displayed.

TCCATGGCAGGAGTTCATCAACTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_75/12803‑13052
                                                                                                                                                     |                                                                                                                                                     
 ccATGGCAGGAGTTCATCAACTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAAt                                                                                                                                                      <  1:1696922/150‑1 (MQ=255)
    tGGCAGGAGTTCATCAACTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACg                                                                                                                                                   >  1:2827641/1‑150 (MQ=255)
     ggCAGGAGTTCATCAACTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGt                                                                                                                                                  <  1:2581803/150‑1 (MQ=255)
      gCAGGAGTACATCAACTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTa                                                                                                                                                 <  1:2368086/150‑1 (MQ=255)
        aGGAGTTCATCAACTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAga                                                                                                                                               <  1:1403137/150‑1 (MQ=255)
         ggAGTTCATCAACTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAgat                                                                                                                                              >  1:108093/1‑150 (MQ=255)
          gAGTTCATCAACTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAgatg                                                                                                                                             >  1:3937581/1‑150 (MQ=255)
           aGTTCATCAACTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCATACGGCAGGCCCGTACAGCAGTGCGCCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAgatga                                                                                                                                            <  1:3958693/150‑1 (MQ=255)
           aGTTCATCAACTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAgatga                                                                                                                                            >  1:4098774/1‑150 (MQ=255)
               catcaACTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATg                                                                                                                                        >  1:2079991/1‑150 (MQ=255)
               catcaACTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATg                                                                                                                                        >  1:179533/1‑150 (MQ=255)
               catcaACTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATg                                                                                                                                        >  1:179531/1‑150 (MQ=255)
               catcaACTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATg                                                                                                                                        >  1:3309640/1‑150 (MQ=255)
               catcaACTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATg                                                                                                                                        >  1:2510877/1‑150 (MQ=255)
                    aCTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCtt                                                                                                                                   <  1:2557838/150‑1 (MQ=255)
                    aCTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCtt                                                                                                                                   <  1:2557837/150‑1 (MQ=255)
                         gTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGt                                                                                                                              >  1:4056555/1‑150 (MQ=255)
                             gAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGc                                                                                                                          >  1:2674702/1‑150 (MQ=255)
                             gAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGc                                                                                                                          >  1:696090/1‑150 (MQ=255)
                                       ccGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTg                                                                                                                >  1:2969710/1‑150 (MQ=255)
                                       ccGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTg                                                                                                                >  1:3891116/1‑150 (MQ=255)
                                       ccGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTg                                                                                                                >  1:3458060/1‑150 (MQ=255)
                                          gCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAAc                                                                                                             >  1:3239116/1‑150 (MQ=255)
                                            aGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCg                                                                                                           <  1:1770805/150‑1 (MQ=255)
                                             gTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGt                                                                                                          >  1:1373852/1‑150 (MQ=255)
                                             gTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGt                                                                                                          >  1:3155044/1‑150 (MQ=255)
                                                  cTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGTAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGt                                                                                                     >  1:3474694/1‑150 (MQ=255)
                                                          atGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCt                                                                                             >  1:1988284/1‑150 (MQ=255)
                                                            ggCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGa                                                                                           >  1:1788311/1‑150 (MQ=255)
                                                            ggCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGa                                                                                           >  1:7318/1‑150 (MQ=255)
                                                             gcgcAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGNc                                                                                          <  1:4248707/150‑1 (MQ=255)
                                                             gcgcAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGAc                                                                                          <  1:3450111/150‑1 (MQ=255)
                                                                cAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCAGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCATCTGATCAGAATCTGACGCa                                                                                       >  1:81563/1‑150 (MQ=255)
                                                                  gATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCAtt                                                                                     >  1:2834063/1‑150 (MQ=255)
                                                                    tACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAg                                                                                   <  1:596429/150‑1 (MQ=255)
                                                                      cGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCTCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGAc                                                                                 <  1:2322482/150‑1 (MQ=255)
                                                                      cGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGAc                                                                                 <  1:3759759/150‑1 (MQ=255)
                                                                       gCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCTTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACa                                                                                >  1:1692528/1‑150 (MQ=255)
                                                                        cTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGGATATGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACaa                                                                               >  1:2781148/1‑150 (MQ=255)
                                                                        cTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACaa                                                                               <  1:605547/150‑1 (MQ=255)
                                                                        cTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACaa                                                                               <  1:605543/150‑1 (MQ=255)
                                                                          tCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAg                                                                             >  1:900876/1‑150 (MQ=255)
                                                                            cGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAgtg                                                                           <  1:682486/150‑1 (MQ=255)
                                                                                 cGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGaa                                                                                                <  1:3918462/124‑1 (MQ=255)
                                                                                 cGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTc                                                                      >  1:2652963/1‑150 (MQ=255)
                                                                                    tACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTccac                                                                   <  1:1814032/150‑1 (MQ=255)
                                                                                    tACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTccac                                                                   <  1:1552281/150‑1 (MQ=255)
                                                                                     aCCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTccacc                                                                  >  1:3534626/1‑150 (MQ=255)
                                                                                     aCCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGACGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTccacc                                                                  <  1:3690727/150‑1 (MQ=255)
                                                                                      ccGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTccacca                                                                 <  1:1946769/150‑1 (MQ=255)
                                                                                      ccGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTccacca                                                                 <  1:926602/150‑1 (MQ=255)
                                                                                        gTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCaaa                                                               >  1:3451691/1‑150 (MQ=255)
                                                                                        gTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCaaa                                                               >  1:2275384/1‑150 (MQ=255)
                                                                                        gTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCaaa                                                               >  1:2275386/1‑150 (MQ=255)
                                                                                         ttCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAAt                                                              <  1:2799903/150‑1 (MQ=255)
                                                                                          tCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATa                                                             <  1:2529100/150‑1 (MQ=255)
                                                                                             gACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAagt                                                          >  1:275516/1‑150 (MQ=255)
                                                                                             gACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAagt                                                          >  1:275513/1‑150 (MQ=255)
                                                                                             gACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAagt                                                          >  1:1126095/1‑150 (MQ=255)
                                                                                             gACGGCAGACCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAagt                                                          >  1:3948327/1‑150 (MQ=255)
                                                                                                gatcagcccgtACAACAGTGCTCCACGCTCGCCGCCGTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcaatgtaataacagag                                                       <  1:2252794‑M2/145‑97 (MQ=255)
                                                                                                 atcagcccgTACAACAGTGCTCCACGCTCGCCGCCGTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataactgagg                                                      <  1:3845399‑M2/146‑98 (MQ=255)
                                                                                                 atcagcccgTACAACAGTGCTCCACGCTCGCCGCCGTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagg                                                      >  1:4137324‑M2/5‑53 (MQ=255)
                                                                                                  cAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTgg                                                     <  1:1931443/150‑1 (MQ=255)
                                                                                                   cagccCGTACAACAGTGCTCCACGCTCGCCGCCGTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggc                                                    <  1:629531‑M2/148‑100 (MQ=255)
                                                                                                     gCCCGTACAACAGTGCTCCACGCTCGCCGCCGTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcat                                                  <  1:1970527‑M2/150‑102 (MQ=255)
                                                                                                      cccGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGaac                                                 <  1:2887201/150‑3 (MQ=255)
                                                                                                      cccGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGGCTGGGCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGaac                                                 <  1:3315806/150‑3 (MQ=255)
                                                                                                      cccGTACAACAGTGCTCCACGCTCGCCGCCGTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatc                                                 <  1:3597530‑M2/150‑103 (MQ=255)
                                                                                                       ccGTACAACAGTGCTCCACGCTCGCCGCCGTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcc                                                >  1:3668351‑M2/1‑47 (MQ=255)
                                                                                                           aCAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGaaccaaag                                            >  1:3023175/1‑143 (MQ=255)
                                                                                                              gcagTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATACGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGaaccaaagtgt                                         >  1:1094481/1‑140 (MQ=255)
                                                                                                               cagTGCTCCACGCTCGCCGCCGTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgatt                                        >  1:3117338‑M2/1‑39 (MQ=255)
                                                                                                                agTGCTCCACGCTCGCCGCCGTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattc                                       >  1:3561735‑M2/1‑38 (MQ=255)
                                                                                                                agTGCTCCACGCTCGCCGCCGTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattc                                       <  1:1482833‑M2/150‑113 (MQ=255)
                                                                                                                 gTGCTCCACGCTCGCCGCCGTGATCGCTGCCAAAGAActtaaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattca                                      >  1:395746‑M2/1‑37 (MQ=255)
                                                                                                                   gctccacgctCGCCGCCGTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagt                                    >  1:2159522‑M2/4‑35 (MQ=255)
                                                                                                                   gctccacgctCGCCGCCGTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagt                                    >  1:2269714‑M2/4‑35 (MQ=255)
                                                                                                                   gctccacgctCGCCGCCGTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagt                                    >  1:232691‑M2/4‑35 (MQ=255)
                                                                                                                   gCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGaaccaaagtgtcagat                                    >  1:2790870/1‑135 (MQ=25)
                                                                                                                    ctccacgcTCGCCGCCGTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagta                                   >  1:1731709‑M2/3‑34 (MQ=255)
                                                                                                                        acGCTCGCCGCCGTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagtacata                               >  1:4166701‑M2/1‑30 (MQ=255)
                                                                                                                           cTCGCCGCCGTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagtacatagct                            <  1:1243456‑M2/150‑124 (MQ=255)
                                                                                                                              gccgccGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGaaccaaagtgtcag                                      >  1:3076852/1‑124 (MQ=255)
                                                                                                                               ccgccgTGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagtacatagctgaac                        <  1:1285357‑M2/150‑128 (MQ=255)
                                                                                                                                     tGATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagtacatagctgaacgcttcg                  >  1:3274959‑M2/1‑17 (MQ=255)
                                                                                                                                      gATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagtacatagctgaacgcttcgc                 >  1:2916978‑M2/1‑16 (MQ=255)
                                                                                                                                      gATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagtacatagctgaacgcttcgc                 <  1:1306725‑M2/150‑135 (MQ=255)
                                                                                                                                      gATCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagtacatagctgaacgcttcgc                 >  1:1640169‑M2/1‑16 (MQ=255)
                                                                                                                                        tCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagtacatagctgaacgcttcgccc               >  1:2314447‑M2/1‑14 (MQ=255)
                                                                                                                                        tCGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagtacatagctgaacgcttcgccc               <  1:666033‑M2/150‑137 (MQ=255)
                                                                                                                                         cGCTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagtattattatccgcctccgccagaccgtcatcactgtaataacggagggcatcccactgatccagtacatagctgaacgcttcgctca              <  1:4210603‑M2/150‑138 (MQ=255)
                                                                                                                                           cTGCCAAAGAAcatagagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatcctcctccgccagaccttcatcactgtaataacagagggcgtcccactgagtcagtacatagctgaacgcttcgcccagt            >  1:2859171‑M2/1‑11 (MQ=255)
                                                                                                                                           cTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagtacatagctgaacgcttcgcccagt            <  1:3434085‑M2/150‑140 (MQ=255)
                                                                                                                                           cTGCCAAAGAAcataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagtacatagctgaacgcttcgcccagt            <  1:1652900‑M2/150‑140 (MQ=255)
                                                                                                                                            tGCCAAAGAAcataaagtttttctttccgaaacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagtacatagctgaacgcttcgcccagtc           >  1:783831‑M2/1‑10 (MQ=255)
                                                                                                                                             gCCAAAGAAcataaagtttttctttccgagacaaactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccggcatcactgtaataacagagggcatcccacggattcagtacatagctgaacgcttcgcccagtct          >  1:2919006‑M2/1‑9 (MQ=255)
                                                                                                                                                 aagaacataaaggttttccttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcaccgtaataacagagggcatcccactgattcagtacatagctgaacgcttcgcccagtctggat      >  1:2809973‑M2/1‑5 (MQ=255)
                                                                                                                                                    aacataaagtttttctttccgaaacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagtacatagctgaacgcttcgcccagtctggatttt   >  1:1227551‑M2/1‑2 (MQ=255)
                                                                                                                                                     acataaagtttttctttccgagacagactgcacgaagcgctctttccgcagcattattatccgcctccgccagaccgtcatcactgtaataacagagggcatcccactgattcagtacatagctgaacgcttcgcccagtctggattttt  >  1:2986896‑M2/1‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TCCATGGCAGGAGTTCATCAACTCGGTTGGAAGGCCATTCCGGCAGTACGCTCAGGATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_75/12803‑13052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.