| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_21 | = 75 | NA (NA) | 21 (0.360) +AAATATGGCGGTGAGGGGGGGAT |
16/250 | 2.7 | 100% | intergenic (–/+2) | –/add | –/Adenosine deaminase |
| ? | Xen14_93 | = 7777 | 0 (0.000) | intergenic (‑302/–) | ghrA/– | Glyoxylate/hydroxypyruvate reductase A/– | |||||
TTTTAAAAAAGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_93/7630‑7777 | ttttAAAAAAGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAat > 1:2652860‑M2/1‑148 (MQ=255) ttAAAAAAGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatcc > 1:648688‑M2/1‑146 (MQ=255) aaaaaaGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatcccc > 1:3607642‑M2/1‑144 (MQ=255) aaaaaaGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatcccc > 1:1458125‑M2/1‑144 (MQ=255) aaaaaGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccc > 1:2349813‑M2/1‑143 (MQ=255) aaaaaGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccc < 1:3041054‑M2/150‑8 (MQ=255) aaaaaGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccc > 1:2349814‑M2/1‑143 (MQ=255) aaGTGTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCAGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccct > 1:4054069‑M2/1‑140 (MQ=255) aGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctc < 1:2245246‑M2/150‑12 (MQ=255) aGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctc < 1:2245247‑M2/150‑12 (MQ=255) tgttgACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATATGGCAACGTATCGGGGGTTCGAatccccccctcaccg > 1:33770‑M2/1‑135 (MQ=255) gttgACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgc < 1:3440576‑M2/150‑17 (MQ=255) aCCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccata > 1:14967‑M2/1‑130 (MQ=255) gTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatcccccctcaccgccatatttaaata < 1:4250611‑M2/150‑28 (MQ=255) gTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaat > 1:1862928‑M2/1‑123 (MQ=255) gTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaat < 1:1629386‑M2/150‑28 (MQ=255) gTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaa < 1:3467455‑M2/149‑27 (MQ=255) tCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaata < 1:2659721‑M2/150‑29 (MQ=255) tttCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatc < 1:2193272‑M2/150‑35 (MQ=255) ccTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctcc < 1:277942‑M2/150‑39 (MQ=255) aaaTTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCTGAGTGGCGGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggc > 1:1527520‑M2/1‑109 (MQ=255) gTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggt < 1:3950895‑M2/150‑54 (MQ=255) ccAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttt < 1:1081572‑M2/150‑57 (MQ=255) aaGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaa < 1:2431418‑M2/150‑62 (MQ=255) cAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcg > 1:114049‑M2/1‑85 (MQ=255) gAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgtgcct < 1:830363‑M2/150‑69 (MQ=255) gAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcct < 1:830360‑M2/150‑69 (MQ=255) aCAATTTGGTGGGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcctataag < 1:2041040‑M2/150‑74 (MQ=255) gTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcctataaggctctctt > 1:845995‑M2/1‑69 (MQ=255) ggTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAattcccccctcaccgccatatttaaataaatatcctccggcatagccggaggttttccaaatgcgcctataaggctctcttacca < 1:4253934‑M2/150‑86 (MQ=255) ggCTGCAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcctataaggctctcttaccagccgcgcccta < 1:3410488‑M2/150‑97 (MQ=255) gAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcctataaggctctcttaccagccgcgccctaacag > 1:3935825‑M2/1‑50 (MQ=255) gAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcctataaggctctcttaccagccgcgccctaacag < 1:80474‑M2/150‑101 (MQ=255) cGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatggccggaggtttttcaaatgcgcctataaggctctcttaccagccgcgccctaacag > 1:2577319‑M2/1‑22 (MQ=255) | TTTTAAAAAAGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_93/7630‑7777 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |